Difference between revisions of "ENST00000533859.1"

Revision as of 12:38, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000533859.1
Source	Gencode19
Same with	lnc-SPATA19-2:1
Classification	intronic(S)
Length	2936 nt
Genomic location	chr11-:133229924..133235975
Exon number	2
Exons	133229924..133232087,133235204..133235975
Genome context
Sequence	000001 GTAAAATGAA AGGAAGAGAA AACGTGGGGT GTGGAAGACA TTGCCAGTAG CCTGCAATAT CTTTCCTTCC TTCCTTGCTA 000080 000081 AGAGGAGCCA TTGTTTGGGG CAGCAGGTGC CCCATCCCAA GGACCAACCA TGTTCCCTAA TTTCCAGCAT CCTTTGCAGC 000160 000161 TGTGGATGGC CATGTGGCCT ATTTTTTTGC CATTGGGTTG TAAGTGGAAG TTGGATTCCA AGAGAGCTTT TTCATAACCC 000240 000241 ATGAAAAACT CAGTTACTGC TAGGATTACA CTTTTCTCTT TTTGTCAGCA GCCATCTTAT GACCAAGAGG TGACTAGCAT 000320 000321 GAACACAAAT GCCTTCACAC TGAGGGTAGG AAGCTGGAAA GCAGACTTTA GACAGCAGAT GGCATCCTTG AATATCTCAA 000400 000401 CACTAATGCC TTTATGTCCC CAGACTTCAT GTTCTGGGGG AAGAATCGAT CTCTATTCAT TTACCCTACC ATACATGAGG 000480 000481 TATGGACTGC ATGTCTGTCC CTCCCTATTC CCGTGTTGAA CTCCTGACCT TCAACAGGAT GGTATTTGGA GGTGGGACCT 000560 000561 TTGGGAGGTG ATTAGATCAT GACAGTGGGG CTCTCATGGA TGGGATTAGC ACCTTATATA AGGAGATATG TGAGAAAGAT 000640 000641 GGTTTTTCTC TCAGCCATGC GAGGATAATA ATGAGAAAAC CACTATCTGC AAACCAGAAA CAGTCCTTCG TCAGACACCA 000720 000721 CATCTGCCAG TGCCTTGATC TTGGACTTCC AGCCTCCAGA ATTGTGAGAA ATAATCCCAA GTCACACCAC CTTCTATTCG 000800 000801 ATGGGCTCTA CGTATCAGGA AGGTACCTGT GACTGGTGGA AGGAAAATGC ACTTAGCAGT AATTAGAAGC TGAGCTCAGG 000880 000881 GTGCAGCTCC AGGGACAACG CCCGCAGCCC CGACCTCCTT CCCTGCTCAG TCCAGCACAG GAGGAAGGAC ACCATTTTCT 000960 000961 CCGGCTTGCA GGTGCCGCGT GCCTTTGCCA GCTCCTCGGA CGGCGGCATG GTGGTTGCTC TGTCCCTCTA GAAGCCTCTG 001040 001041 CGCTGCAAAG GTTTGTCGGG TCATTTGACA GAGCTCCATG CGTCCCTGGA GAGTGAGGGC CGGCGCTGCT GTCCCGCATG 001120 001121 CTGAGCTCAT TAGTGCAGAA CTCACTTCGG CAACTGTGGA GGCAGACAGC ATGAACAAAG TGCACCTGTG AGCGACACTG 001200 001201 CCAGCCCTTG GGAGCGGCTG CGGGCCTGCA GGGGTGAGCG GGGCGCGGCG TGGCTCTCTA GGCGCTTATG GGGGCGGGAA 001280 001281 ATGGCGGTGC CCCGGAGTAG CTGCAGGCGC CCCGGGATAG CTGCAGGTGC CCCGGAATAG CTGCAGGTGC CCCGGAGTAG 001360 001361 CTGCAGGTGC CCCGGAATAG CTGCAGGTGC CCCGGAGTAG CTGCAGGTGC CCCGGACCTG TCTGCGCGCC GGGACACGGG 001440 001441 TGCACTGATG CGCGGCGGGC GAACCGCTTG CTCTTCCTCC CACAGCATAG GTGCATTTTG TCTGCAAGAA CGCATTGGTG 001520 001521 GTGTCCTGAT CGACACCGCC AGGACCTGGA GGGGGTGCCT GGCACAGTGA CCCCGACGTT GGGCTGGCCC CAGCCTTCCT 001600 001601 CTTCTTCCTG CTCTGTGTGG AAGGGGGGCC GCATCACCCT TGGTTCCAGG CAGCCAGCGA GCATTGCGCT CCCGGAAACC 001680 001681 CCCTCCACGC GGGACTTCAC CCCAGAGGGC TCGTCTGCTG AATAACCGTC ACTCAGGCAG CATCTGGAAA TTCCCCGCAC 001760 001761 TTTCAGGCTG AGATGAGACC GCATGCCTGG GAGATCTCAC GGACAGCGCC GGCTTGGTGG TCAAGCGGTG GGAGGCCGAA 001840 001841 GGCCCCGGCC TTTACAACAA GCGGGGGGTC ATAGGAAGTG TCCCTTGGGG CTGGGGACCC AGGGCAGCCG TGCGGAAGGG 001920 001921 AGTCACCCAA CCAGAGCACG AAGCGCAAGG CC

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>GTAAAATGAAAGGAAGAGAAAACGTGGGGTGTGGAAGACATTGCCAGTAGCCTGCAATATCTTTCCTTCCTTCCTTGCTAAGAGGAGCCATTGTTTGGGGCAGCAGGTGCCCCATCCCAAGGACCAACCATGTTCCCTAATTTCCAGCATCCTTTGCAGCTGTGGATGGCCATGTGGCCTATTTTTTTGCCATTGGGTTGTAAGTGGAAGTTGGATTCCAAGAGAGCTTTTTCATAACCCATGAAAAACTCAGTTACTGCTAGGATTACACTTTTCTCTTTTTGTCAGCAGCCATCTTATGACCAAGAGGTGACTAGCATGAACACAAATGCCTTCACACTGAGGGTAGGAAGCTGGAAAGCAGACTTTAGACAGCAGATGGCATCCTTGAATATCTCAACACTAATGCCTTTATGTCCCCAGACTTCATGTTCTGGGGGAAGAATCGATCTCTATTCATTTACCCTACCATACATGAGGTATGGACTGCATGTCTGTCCCTCCCTATTCCCGTGTTGAACTCCTGACCTTCAACAGGATGGTATTTGGAGGTGGGACCTTTGGGAGGTGATTAGATCATGACAGTGGGGCTCTCATGGATGGGATTAGCACCTTATATAAGGAGATATGTGAGAAAGATGGTTTTTCTCTCAGCCATGCGAGGATAATAATGAGAAAACCACTATCTGCAAACCAGAAACAGTCCTTCGTCAGACACCACATCTGCCAGTGCCTTGATCTTGGACTTCCAGCCTCCAGAATTGTGAGAAATAATCCCAAGTCACACCACCTTCTATTCGATGGGCTCTACGTATCAGGAAGGTACCTGTGACTGGTGGAAGGAAAATGCACTTAGCAGTAATTAGAAGCTGAGCTCAGGGTGCAGCTCCAGGGACAACGCCCGCAGCCCCGACCTCCTTCCCTGCTCAGTCCAGCACAGGAGGAAGGACACCATTTTCTCCGGCTTGCAGGTGCCGCGTGCCTTTGCCAGCTCCTCGGACGGCGGCATGGTGGTTGCTCTGTCCCTCTAGAAGCCTCTGCGCTGCAAAGGTTTGTCGGGTCATTTGACAGAGCTCCATGCGTCCCTGGAGAGTGAGGGCCGGCGCTGCTGTCCCGCATGCTGAGCTCATTAGTGCAGAACTCACTTCGGCAACTGTGGAGGCAGACAGCATGAACAAAGTGCACCTGTGAGCGACACTGCCAGCCCTTGGGAGCGGCTGCGGGCCTGCAGGGGTGAGCGGGGCGCGGCGTGGCTCTCTAGGCGCTTATGGGGGCGGGAAATGGCGGTGCCCCGGAGTAGCTGCAGGCGCCCCGGGATAGCTGCAGGTGCCCCGGAATAGCTGCAGGTGCCCCGGAGTAGCTGCAGGTGCCCCGGAATAGCTGCAGGTGCCCCGGAGTAGCTGCAGGTGCCCCGGACCTGTCTGCGCGCCGGGACACGGGTGCACTGATGCGCGGCGGGCGAACCGCTTGCTCTTCCTCCCACAGCATAGGTGCATTTTGTCTGCAAGAACGCATTGGTGGTGTCCTGATCGACACCGCCAGGACCTGGAGGGGGTGCCTGGCACAGTGACCCCGACGTTGGGCTGGCCCCAGCCTTCCTCTTCTTCCTGCTCTGTGTGGAAGGGGGGCCGCATCACCCTTGGTTCCAGGCAGCCAGCGAGCATTGCGCTCCCGGAAACCCCCTCCACGCGGGACTTCACCCCAGAGGGCTCGTCTGCTGAATAACCGTCACTCAGGCAGCATCTGGAAATTCCCCGCACTTTCAGGCTGAGATGAGACCGCATGCCTGGGAGATCTCACGGACAGCGCCGGCTTGGTGGTCAAGCGGTGGGAGGCCGAAGGCCCCGGCCTTTACAACAAGCGGGGGGTCATAGGAAGTGTCCCTTGGGGCTGGGGACCCAGGGCAGCCGTGCGGAAGGGAGTCACCCAACCAGAGCACGAAGCGCAAGGCCGTGGGCAGCCCCGCAGCCGGGCGGGTAGGACTGCCAGGACTCAGGCATTCGAGCACTTCACGTGTCACACATGCTGCGGAGAACCATTTGCCCTTCGCCACAGCCCTTAGAGTATCTACCGCGTGTGACTACTGTGGCCTCCACTTCCAAGAGAAGGAAACGGGAGTGGAGAGGTGTTTAGTTGCTTAGCCAAGCTGCCTGAGAGCTGGAGCTGATATTTGAACCCGGGCAAGTCTGACTCCAACATCTGTGTTCCTAAATATTCCCCACGTGGCCGTGGGGAAGGTCAACGCAATGAATAACGAGAAAGAAGACACACAGCTTAGACAGATTTTATGAATCAGAATTAAGCAACATAAGTTGCCCGTCTCCCCCTTCTTCCCTCCTCCCTTCTTCCCTCCTCCCCTTTCTCCCCTCCGTCCCCGCTTCCTTCCTTCATTTCTATCAGCCTTTATTGAAAGCATCCTACCTGTGTATTTTCCACAATTCCTGTCAAAATCCTGTGCTCCCAGAAGCGGAGCCTCTCCGTCTCTTGGCTCCAAAGCTGTCTGAGCCTGCCCTGGCTTCAGTCCAGAGGAGACCGGCTTCCTTCCTTCCCCTGCGGGCATCGTCGGCCCTTGCATTCGCATCCTTTGCAGGTGAAGGAATGGCATGGAATCTCGCGTGAGAACTTCATGGTTCCAATGTCAGAATTATGTAGGGATAATTAGAATTCTTAGGCCCTGGTGTGATGTAGTAGGAAGAAAAGAGGTTATGGAGTTGGCCATAGATAAAATAGAATCTCTGCTCTGCTAACTTCTAATTATGTGCTTTCAAAAAATACATTTCCCTTCCTGGATATTCAGTTTCCTGATGTGGATAACCCATCCTGATGGGCAATTATACAAGAAAATTGATGTTAAGTTCCTAGCACGGTGCCTGGCACATTGTCAATGTTCAATAAACTTTAGTTCTCATTTCTCTGTTTCTAGTGGGATTTTAAGC</dnaseq>|
 }}
-[[Category:Intronic(S)]]
+[[Category:Intronic(S)]][[Category:ENSG00000254896.1]]