Difference between revisions of "NONHSAT040967"

From LncRNAWiki
Jump to: navigation, search
(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
Line 42: Line 42:
 
sequence = <dnaseq>TGTCATACGATACCATTTTTTGACCACTTAGTTGATGCCTCTGAAAGGAAGAGAGAATCAGATCGCTAAAATTTGATGTGTCGTCAGTGTGGATCCTACTCAGTAGTGTCACAACGAGGCTGAAAATCATATTAAGTGCTTTTAGGACAGAAACGTAAACTGCTCAGGTAAAATAACCTTATAAAGAGAAATAAGCATATATTGCAGAGGCCTTGGCTAGGTTCATGATGACACAGGACCTTGTCTGAACATAATGATTTCAAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGTGTGCCTCACTAGACTTTTCGATTTCAAGATTTTCTGCAGAAAATGTTTTGAAAACTTTGAATACTTAAAAATGGCAGGTGTAGTATTGCACTTTGCTAGTTGCTCAGATACCCTTTTTTATTTGTATAGATATTCTGAGTTCCTTTTTTTTTCTACATGTTGTACGTTGTCGAAAGCTAAAAGGAAACTTATCCTTGGATCACGGAAGGCAGAGGCATTTGGTGAGATGGAAACAAGGATGTGTAAAAATGAGACGACCACCTCTCGGATTAAAAAAAAAAAGTGCCAGAGTTCTAGGGTTCTAAGTGATGTCCAGGAAGGAGGAGGAATAATATTTATGGAGCATATATTATGGAACACACCATTATGAATGGTTTTTGATTGATCTCACAAAGAGCATGTGCTTTAGACATTAATGCAGCGACTACCATGAAACAGAGTATTGGATTACCTAAGGAAAGAAGCAGAGGATGGAATTTGAGGCAATCAGGATGAGTGAAAAATTGATTTGCAGCTGACCTGCAAATGGAATCATCAGGAACATCCCTTTCTCATGGAGTCCCTTAATTTACAAGTTAACTGCAAACATAGGAGATGATAGTTCCAAGAAGGAACATTTTATCGTCTTTGTTTTTAATCTCAAGAATGGTACCTACCATCAGTGAATGACCTGTTGCAGTGCTTTCATTGAAGTGTTCTTCGTTCCCTCAGCAATATGATTGTGATGACTGAAAAAGGGAAACTGTGCCACTATTTGTACCATCATTTTCACCAAAATCTAAAAATGCTTTTTATGACGTATGGAGACATTCTTCATGTTTGTTTCAGTGGACACTCCTTGCAGATGTAAAAAACTGAGAAAACTCACTTTTGGAAAGTGACCTAAAGAGTGTCATTGAAGTGAATTTTAAGTAGGCACGATGATTGTTTTCATGGTTGCTGTTGGATCATATCTCAGGAGCTGGAATGACAGACATTATTGAACAAAGAAATCAGGATAGTGGAACTTAAAGGGCTTCATCTCAGTGCTTTCATAAGTATGAAGTGCATATATTTATAATTTTCACTAATCACAGGAATATTCCCTCTGTATACTTGCATTTTTTTCTATCAATTGACGCTTACAATTATTTTTGCAAGTTGGAAAAAAATGCAGTATTAATTTCATTTGCAACAAATTTAATAGATTAATTAGGAGAGAATAGATATCTTTAAAATTGAGTCTTCTGTCCAACTGCAAGTTATAGCTGAGGTGGTACCAGTTTAAGAAGTGAGAACTTCTTCACTGACTGAAATTTGCATATCAATCCAAATCATTGTGCTTATTTACTATTTTTGTAGACGTCATTCTTCAAAAGTGCTGCATCTTCAATAGTCAAGGAGGACAAAGACATCTTTCCTGCAGGTGGTGACCATGTGGATAATAGGATCATAGACAAATGGTGGTTCCATCTACAGCATCACCGAAATGCTGTTGTTACTGCTTCTTTCTGGGATCTTCTTGCATCTTTGCTTCTAAAGGGGCACACCTTTTATAGAAGTACGTCCAGGAATAGAAGTGACCTGCTTTTTCGCAAGTAATTGCCTGGAATGTTTTTATGTACTTCTCTGCACTCTCAATACATTTCATGCTTCCCTCTATTTTTGTATATTAACTCATTGTATTTCTTAAATTTATATTTTACTTTATGAATGGAAGTGAGATTTGTGTATGGTAAATATAATTAATTCAACCCCATGGATACGTTAGTCACTGTCCAGATGATGGCAAGTCTTTCTCAGAAGCAGAGGGCCTTGGTGTGCCAGTGATTTTTTTTCCCCATGTGTAAGATACTTTTTTTCCTCATTTGAATCAGGAGCCCACAGTTTTTAGACAAGTCCCAAATGAAATCTTAAGCATTTGTGTTATCTGGACTAGACCTTCTGTAGTATCCTTTTTGTTAGACCTAGTATATCTCATTGCAGATCAGGATCTGAGATTGACTATAGTTCACCTCTTTCCAAGTACACAAACTTGGATGACATGACAACTGAGTGTGTAAGGGAGAGCGAGACCCTTGCACTGCCATTTGAGCCCTTGTGATCTCATCTTGTAGAACATGTTGTACAATCATTTTATTGGTATCATTAGTGTTATTTGGGGCTGGAATAAAAATCTCAGTGCACC</dnaseq>|
 
sequence = <dnaseq>TGTCATACGATACCATTTTTTGACCACTTAGTTGATGCCTCTGAAAGGAAGAGAGAATCAGATCGCTAAAATTTGATGTGTCGTCAGTGTGGATCCTACTCAGTAGTGTCACAACGAGGCTGAAAATCATATTAAGTGCTTTTAGGACAGAAACGTAAACTGCTCAGGTAAAATAACCTTATAAAGAGAAATAAGCATATATTGCAGAGGCCTTGGCTAGGTTCATGATGACACAGGACCTTGTCTGAACATAATGATTTCAAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGTGTGCCTCACTAGACTTTTCGATTTCAAGATTTTCTGCAGAAAATGTTTTGAAAACTTTGAATACTTAAAAATGGCAGGTGTAGTATTGCACTTTGCTAGTTGCTCAGATACCCTTTTTTATTTGTATAGATATTCTGAGTTCCTTTTTTTTTCTACATGTTGTACGTTGTCGAAAGCTAAAAGGAAACTTATCCTTGGATCACGGAAGGCAGAGGCATTTGGTGAGATGGAAACAAGGATGTGTAAAAATGAGACGACCACCTCTCGGATTAAAAAAAAAAAGTGCCAGAGTTCTAGGGTTCTAAGTGATGTCCAGGAAGGAGGAGGAATAATATTTATGGAGCATATATTATGGAACACACCATTATGAATGGTTTTTGATTGATCTCACAAAGAGCATGTGCTTTAGACATTAATGCAGCGACTACCATGAAACAGAGTATTGGATTACCTAAGGAAAGAAGCAGAGGATGGAATTTGAGGCAATCAGGATGAGTGAAAAATTGATTTGCAGCTGACCTGCAAATGGAATCATCAGGAACATCCCTTTCTCATGGAGTCCCTTAATTTACAAGTTAACTGCAAACATAGGAGATGATAGTTCCAAGAAGGAACATTTTATCGTCTTTGTTTTTAATCTCAAGAATGGTACCTACCATCAGTGAATGACCTGTTGCAGTGCTTTCATTGAAGTGTTCTTCGTTCCCTCAGCAATATGATTGTGATGACTGAAAAAGGGAAACTGTGCCACTATTTGTACCATCATTTTCACCAAAATCTAAAAATGCTTTTTATGACGTATGGAGACATTCTTCATGTTTGTTTCAGTGGACACTCCTTGCAGATGTAAAAAACTGAGAAAACTCACTTTTGGAAAGTGACCTAAAGAGTGTCATTGAAGTGAATTTTAAGTAGGCACGATGATTGTTTTCATGGTTGCTGTTGGATCATATCTCAGGAGCTGGAATGACAGACATTATTGAACAAAGAAATCAGGATAGTGGAACTTAAAGGGCTTCATCTCAGTGCTTTCATAAGTATGAAGTGCATATATTTATAATTTTCACTAATCACAGGAATATTCCCTCTGTATACTTGCATTTTTTTCTATCAATTGACGCTTACAATTATTTTTGCAAGTTGGAAAAAAATGCAGTATTAATTTCATTTGCAACAAATTTAATAGATTAATTAGGAGAGAATAGATATCTTTAAAATTGAGTCTTCTGTCCAACTGCAAGTTATAGCTGAGGTGGTACCAGTTTAAGAAGTGAGAACTTCTTCACTGACTGAAATTTGCATATCAATCCAAATCATTGTGCTTATTTACTATTTTTGTAGACGTCATTCTTCAAAAGTGCTGCATCTTCAATAGTCAAGGAGGACAAAGACATCTTTCCTGCAGGTGGTGACCATGTGGATAATAGGATCATAGACAAATGGTGGTTCCATCTACAGCATCACCGAAATGCTGTTGTTACTGCTTCTTTCTGGGATCTTCTTGCATCTTTGCTTCTAAAGGGGCACACCTTTTATAGAAGTACGTCCAGGAATAGAAGTGACCTGCTTTTTCGCAAGTAATTGCCTGGAATGTTTTTATGTACTTCTCTGCACTCTCAATACATTTCATGCTTCCCTCTATTTTTGTATATTAACTCATTGTATTTCTTAAATTTATATTTTACTTTATGAATGGAAGTGAGATTTGTGTATGGTAAATATAATTAATTCAACCCCATGGATACGTTAGTCACTGTCCAGATGATGGCAAGTCTTTCTCAGAAGCAGAGGGCCTTGGTGTGCCAGTGATTTTTTTTCCCCATGTGTAAGATACTTTTTTTCCTCATTTGAATCAGGAGCCCACAGTTTTTAGACAAGTCCCAAATGAAATCTTAAGCATTTGTGTTATCTGGACTAGACCTTCTGTAGTATCCTTTTTGTTAGACCTAGTATATCTCATTGCAGATCAGGATCTGAGATTGACTATAGTTCACCTCTTTCCAAGTACACAAACTTGGATGACATGACAACTGAGTGTGTAAGGGAGAGCGAGACCCTTGCACTGCCATTTGAGCCCTTGTGATCTCATCTTGTAGAACATGTTGTACAATCATTTTATTGGTATCATTAGTGTTATTTGGGGCTGGAATAAAAATCTCAGTGCACC</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:NONHSAG016302]]

Revision as of 12:43, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT040967

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2469 nt

Genomic location

chr15+:25226922..25266498

Exon number

9

Exons

25226922..25227584,25243513..25243633,25244117..25244225,25245392..25245521,25246505..25246860,25247872..25248035,25264174..25264295,25264975..25265016,25265737..25266498

Genome context

Sequence
000001 TGTCATACGA TACCATTTTT TGACCACTTA GTTGATGCCT CTGAAAGGAA GAGAGAATCA GATCGCTAAA ATTTGATGTG 000080
000081 TCGTCAGTGT GGATCCTACT CAGTAGTGTC ACAACGAGGC TGAAAATCAT ATTAAGTGCT TTTAGGACAG AAACGTAAAC 000160
000161 TGCTCAGGTA AAATAACCTT ATAAAGAGAA ATAAGCATAT ATTGCAGAGG CCTTGGCTAG GTTCATGATG ACACAGGACC 000240
000241 TTGTCTGAAC ATAATGATTT CAAAATTTGA GCTTAAAAAT GACACTCTGA AATCCAGTCA GTGTGCCTCA CTAGACTTTT 000320
000321 CGATTTCAAG ATTTTCTGCA GAAAATGTTT TGAAAACTTT GAATACTTAA AAATGGCAGG TGTAGTATTG CACTTTGCTA 000400
000401 GTTGCTCAGA TACCCTTTTT TATTTGTATA GATATTCTGA GTTCCTTTTT TTTTCTACAT GTTGTACGTT GTCGAAAGCT 000480
000481 AAAAGGAAAC TTATCCTTGG ATCACGGAAG GCAGAGGCAT TTGGTGAGAT GGAAACAAGG ATGTGTAAAA ATGAGACGAC 000560
000561 CACCTCTCGG ATTAAAAAAA AAAAGTGCCA GAGTTCTAGG GTTCTAAGTG ATGTCCAGGA AGGAGGAGGA ATAATATTTA 000640
000641 TGGAGCATAT ATTATGGAAC ACACCATTAT GAATGGTTTT TGATTGATCT CACAAAGAGC ATGTGCTTTA GACATTAATG 000720
000721 CAGCGACTAC CATGAAACAG AGTATTGGAT TACCTAAGGA AAGAAGCAGA GGATGGAATT TGAGGCAATC AGGATGAGTG 000800
000801 AAAAATTGAT TTGCAGCTGA CCTGCAAATG GAATCATCAG GAACATCCCT TTCTCATGGA GTCCCTTAAT TTACAAGTTA 000880
000881 ACTGCAAACA TAGGAGATGA TAGTTCCAAG AAGGAACATT TTATCGTCTT TGTTTTTAAT CTCAAGAATG GTACCTACCA 000960
000961 TCAGTGAATG ACCTGTTGCA GTGCTTTCAT TGAAGTGTTC TTCGTTCCCT CAGCAATATG ATTGTGATGA CTGAAAAAGG 001040
001041 GAAACTGTGC CACTATTTGT ACCATCATTT TCACCAAAAT CTAAAAATGC TTTTTATGAC GTATGGAGAC ATTCTTCATG 001120
001121 TTTGTTTCAG TGGACACTCC TTGCAGATGT AAAAAACTGA GAAAACTCAC TTTTGGAAAG TGACCTAAAG AGTGTCATTG 001200
001201 AAGTGAATTT TAAGTAGGCA CGATGATTGT TTTCATGGTT GCTGTTGGAT CATATCTCAG GAGCTGGAAT GACAGACATT 001280
001281 ATTGAACAAA GAAATCAGGA TAGTGGAACT TAAAGGGCTT CATCTCAGTG CTTTCATAAG TATGAAGTGC ATATATTTAT 001360
001361 AATTTTCACT AATCACAGGA ATATTCCCTC TGTATACTTG CATTTTTTTC TATCAATTGA CGCTTACAAT TATTTTTGCA 001440
001441 AGTTGGAAAA AAATGCAGTA TTAATTTCAT TTGCAACAAA TTTAATAGAT TAATTAGGAG AGAATAGATA TCTTTAAAAT 001520
001521 TGAGTCTTCT GTCCAACTGC AAGTTATAGC TGAGGTGGTA CCAGTTTAAG AAGTGAGAAC TTCTTCACTG ACTGAAATTT 001600
001601 GCATATCAAT CCAAATCATT GTGCTTATTT ACTATTTTTG TAGACGTCAT TCTTCAAAAG TGCTGCATCT TCAATAGTCA 001680
001681 AGGAGGACAA AGACATCTTT CCTGCAGGTG GTGACCATGT GGATAATAGG ATCATAGACA AATGGTGGTT CCATCTACAG 001760
001761 CATCACCGAA ATGCTGTTGT TACTGCTTCT TTCTGGGATC TTCTTGCATC TTTGCTTCTA AAGGGGCACA CCTTTTATAG 001840
001841 AAGTACGTCC AGGAATAGAA GTGACCTGCT TTTTCGCAAG TAATTGCCTG GAATGTTTTT ATGTACTTCT CTGCACTCTC 001920
001921 AATACATTTC ATGCTTCCCT CTATTTTTGT ATATTAACTC ATTGTATTTC TTAAATTTA<