Difference between revisions of "NONHSAT116307"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GAACCGCGTTTCCCTCTGCAGAATCAGCTGACTCACTGGAAGGTGGAATTCTTGATCTTGGCTCAGTTTTATCCCATATTCTACCAGTCTCAGGCATGTGGTTATCCCTGTACTTAAGATTCCCAATCCCTCTCCCCTTAAAGCTTTTGGTTGGATGATAGAGCCATACATCATATGAAAAAATTAGTGCATGACTAACAACAGAGGTTCTGGGGTTTCTGGTGGAGACCACTGCTTTATGATGACTAACCAAAGCCCCCTTAGTTATGTATTTCCTGGAAACCCTCATGACTTCCATAACTTTGCTCTTTTATTCTTTCAGAATTAAGAGAGGCTCAGTTATACTCAGTGGACGTGACTCTGGACCCAGACACGGCCTACCCCAGCCTGATCCTCTCTGATAATCTGCGGCAAGTGCGGTACAGTTACCTCCAACAGGACCTGCCTGACAACCCCGAGAGGTTCAATCTGTTTCCCTGTGTCTTGGGCTCTCCATGCTTCATCGCCGGGAGACATTATTGGGAGGTAGAGGTGGGAGATA</dnaseq>| | sequence = <dnaseq>GAACCGCGTTTCCCTCTGCAGAATCAGCTGACTCACTGGAAGGTGGAATTCTTGATCTTGGCTCAGTTTTATCCCATATTCTACCAGTCTCAGGCATGTGGTTATCCCTGTACTTAAGATTCCCAATCCCTCTCCCCTTAAAGCTTTTGGTTGGATGATAGAGCCATACATCATATGAAAAAATTAGTGCATGACTAACAACAGAGGTTCTGGGGTTTCTGGTGGAGACCACTGCTTTATGATGACTAACCAAAGCCCCCTTAGTTATGTATTTCCTGGAAACCCTCATGACTTCCATAACTTTGCTCTTTTATTCTTTCAGAATTAAGAGAGGCTCAGTTATACTCAGTGGACGTGACTCTGGACCCAGACACGGCCTACCCCAGCCTGATCCTCTCTGATAATCTGCGGCAAGTGCGGTACAGTTACCTCCAACAGGACCTGCCTGACAACCCCGAGAGGTTCAATCTGTTTCCCTGTGTCTTGGGCTCTCCATGCTTCATCGCCGGGAGACATTATTGGGAGGTAGAGGTGGGAGATA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG045534]] |
Revision as of 12:45, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT116307 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
541 nt |
| Genomic location |
chr6_apd_hap1-:175652..178762 |
| Exon number |
2 |
| Exons |
175652..175843,178414..178762 |
| Genome context |
|
| Sequence |
000001 GAACCGCGTT TCCCTCTGCA GAATCAGCTG ACTCACTGGA AGGTGGAATT CTTGATCTTG GCTCAGTTTT ATCCCATATT 000080
000081 CTACCAGTCT CAGGCATGTG GTTATCCCTG TACTTAAGAT TCCCAATCCC TCTCCCCTTA AAGCTTTTGG TTGGATGATA 000160 000161 GAGCCATACA TCATATGAAA AAATTAGTGC ATGACTAACA ACAGAGGTTC TGGGGTTTCT GGTGGAGACC ACTGCTTTAT 000240 000241 GATGACTAAC CAAAGCCCCC TTAGTTATGT ATTTCCTGGA AACCCTCATG ACTTCCATAA CTTTGCTCTT TTATTCTTTC 000320 000321 AGAATTAAGA GAGGCTCAGT TATACTCAGT GGACGTGACT CTGGACCCAG ACACGGCCTA CCCCAGCCTG ATCCTCTCTG 000400 000401 ATAATCTGCG GCAAGTGCGG TACAGTTACC TCCAACAGGA CCTGCCTGAC AACCCCGAGA GGTTCAATCT GTTTCCCTGT 000480 000481 GTCTTGGGCT CTCCATGCTT CATCGCCGGG AGACATTATT GGGAGGTAGA GGTGGGAGAT A |
Predicted Small Protein
| Name | NONHSAT116307_smProtein_266:400 |
| Length | 45 |
| Molecular weight | 5011.8187 |
| Aromaticity | 0.113636363636 |
| Instability index | 45.9388636364 |
| Isoelectric point | 9.68780517578 |
| Runs | 6 |
| Runs residual | 0.0267379679144 |
| Runs probability | 0.0363304480952 |
| Amino acid sequence | MYFLETLMTSITLLFYSFRIKRGSVILSGRDSGPRHGLPQPDPL |
| Secondary structure | LLHHHHHHHHHHHHHEEEEEELLEEEEEELLLLLLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
