Difference between revisions of "NONHSAT041744"

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sequence = <dnaseq>GAGTCACTTTTTAGTGCTGCCAAGGAAGTCCTCTGGCTATCACAATTTGATTTCAATAGACAATTGATCAGCTCCCACCCCTGCAGATGGCTCCTTCATGAAGATCTCCCCATTTGGAACACAACATCTGTTTCCTGCTGGGACCCTGACTGACACAAGGGTCAAAATAAGCTCCTCCATGGGAAGCATTGAGAGAGGCAGAAAATAAAGAGAAGGAAGATAATACTATCCATTCATTGCAGTCGTCTATGTGCTAAACACTGTGTGAAGCATTTTGCATGTATTCAATAAATATTTACTCAATGCTTTCAGTTCATATTCTGGCCCTACCGCTCATAATTCCTTATTAGATAGTAGCTACTATTTCTCCAAAACAACAGGATGAAATGTAAACTGAGTGTCCGGTGGCCAAACCAAGGCCTCCTCTTCCCTTATTCAGGGAAGTGTTTTTATCAGCTTCTTTCTAACACAGACCATTTTCCTGCAGTAACATGAAAGGCACTGCACGCGCATTTTCATAGCGGGGGATGTTGAGGGAAGTCTAGACTCAGACAGTACTGATATGGGCTGCGTGGGTGAGGTGGTGGATAAGCAGTCTGGGATTCCTCAGAGAAGGATGCAAAACAGAGGGCAAAGGACACTGAAAGCAAACTTGAGACAATTAAAACTCCAAGATTTCATCAAGGGCTGGCCTTGGTTTTGGCTACTCCACAGGTGCTGGGTGACGGGTGCGGTTCTCCCCCTGGACCATCTCTCTGGGCTTAGCAGCTTGGAGTGCTGCGTGGGGTGTTGAGATTCACGCAGTCACATCCCTCCTTCTCAGAATGTGTAGCACCCACTCAGGAAGCCAGCATGACAGGGCCAGGTGCATTTGCCACCTGGGCAGAGGAGACCTTAACTGCACCTTCCTTCTTTCCCCACTTGAGGGATCTCCTCACAGGTGGCATGCTTTCTTTTCATCTTCATTCTCAGTCTTTCAGAGCACAGTGTTGTAGCTACCAAGTCATTGGCCGCTGTGTTGAGTGGCCGATGACCTGCTAGCTTAATTCACAAGAAGCCAGTTTTCAGAGGTAGGTGCACTTATGTTTGCTCAAAAAGGCAGCAATGGTACTCTGAGAGAACTTTATTCATTGTATCTGGTCCCTATTTGCCCAATTTTATGGATTTTCTTTAAAATTCCTTCCATAATTCTTGACCTTTGGACTATAACTTCAAATGATTATAGACACTGGCCTGTGCTGTCTCACCTTTCTTTTTATATATGAAAATGAACAGTACAAAGCACAGACCCAGGTCTTAAAATAAATAAGCTCATTCAAAAGAAATCAAGCTACAATTAAGTGAAGACATATTACAAATTTAAGAACATCACCATCGCACTAGCAGCACATTAAGGCCACCAGTGCTCAAGGATCTTGGCTATCCCATTGCTTTGACATTGAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGCTGTCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGCGGGATATAGTCTGGTGGTGCGCCGTTTTTTAAGTCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCACACAGTGCACACACCCACTGGCCTGCATCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGGTCTGGATTCGGCATTACATGTCTTAACGGGAAAAATCAACTCAAGATGGATTAAGGACTTAAACCTAAGACTTGAAACTATAAAAATTCTAGAAGATAACATTGGAAAAACCCTTCTAGACATTGACTTAGATAAGTATTTCATGACCAAGAACCCAAAAGCAAATGCAATAAAAACAAAGATAAATAACTAGGACCTAACTGAACTAAGAGCTTTTGTGCAGCAAAAAGAACAGTCAGCAGAGTAAACAGACAACCTACAGAGTGGGAGAAAATCTTCACAATCTATACATCTGACAAAGGACTAATATTCAGAATCCACAACAAACACAAATCAGTGAAAAAATCCTATCAAAAAGTGGGCTAAGGACATAAATAGACAATTCTCAAAAGAAGATATACAAACGTCCAATAAACATGCAAAAAATGCTCAACATCACTAATGATCAGGGAAATGCAAATCAAAACCACAATGTGATATCACTTTGCTCCTGCAAGAATGGCATAATCAAAAAATTGAAAAACAGTAGATGTTGGCGTGGGTGTGGTGATAAGGGAACACTTCTACACTGATACATGATTCAGAGAAGAGCTAAAGATGTTTCCAGTTCCAGGGAACTTTGATAGGAGAGTTGTGAGTTTACATCACAGATAAATCCTCATTTGATCAACAAGTATTCGTTAGCACTTGCTATATTCCACTCTTCGAAGGTACTGGCCATATAACCTTGAACAAACAAGAGTTTTACTTTCTTAGAGCCTGTAGTACGTAATTCCAGATAATGGTGATAAATGTCATAAGAGAGGACTAGCAAAGCACTCAGTAAATTTAGAAAGCAAGGAGCACATCCATCCAGGAAGCTTTCAAGGAGAAGATGGGCCTTAAAGTAAAGGCAGGGGTCTGCCAGCTAAAGAAAGGGTCTAAGGCTTCCAGGTACTACTCTGCCTTTGGACTGACTCATGGCCTTGAACCTTCTCTCCCCGTTTTAATTTCCTCACTCTTAAGAAAGTACACGAGTGATGGAAAGAATTCTGTTAGAAAATGACTTGATAGAATACAGAATGAGCTCCGAGGGAGGGAGAATTTAACCACTGCCATAGATAGGTGCTGCCACACAAAGTTGTTGTGAGAAGTAATTAGTCTGGCGGATCTGGGGAAGAATGTTGATTTGTTGAATCAACAATTATTTATTGGGTACCTACTACATTACCAGTGACAAAGACTTTCCCTTGACCAAAACTTTAGTCAGGCTCCTCTGAGTCCTCTGATTGACCTTGAACTTCCCCCTGTGTCCTTATAGAATCCCATTTGAGCAACAATCCTCCTAAGTCAGGTTAGAAAAAATTCTCCACCCTTGGAATTCCTTGATATCTTATCACCCTGGCCTGCCTTCGGCCATAATCCTATCAAGTTGATTTAGCCAGAAAACCTTTATCCTTGATATTTCCTGTTAGTAATTT</dnaseq>|
 
sequence = <dnaseq>GAGTCACTTTTTAGTGCTGCCAAGGAAGTCCTCTGGCTATCACAATTTGATTTCAATAGACAATTGATCAGCTCCCACCCCTGCAGATGGCTCCTTCATGAAGATCTCCCCATTTGGAACACAACATCTGTTTCCTGCTGGGACCCTGACTGACACAAGGGTCAAAATAAGCTCCTCCATGGGAAGCATTGAGAGAGGCAGAAAATAAAGAGAAGGAAGATAATACTATCCATTCATTGCAGTCGTCTATGTGCTAAACACTGTGTGAAGCATTTTGCATGTATTCAATAAATATTTACTCAATGCTTTCAGTTCATATTCTGGCCCTACCGCTCATAATTCCTTATTAGATAGTAGCTACTATTTCTCCAAAACAACAGGATGAAATGTAAACTGAGTGTCCGGTGGCCAAACCAAGGCCTCCTCTTCCCTTATTCAGGGAAGTGTTTTTATCAGCTTCTTTCTAACACAGACCATTTTCCTGCAGTAACATGAAAGGCACTGCACGCGCATTTTCATAGCGGGGGATGTTGAGGGAAGTCTAGACTCAGACAGTACTGATATGGGCTGCGTGGGTGAGGTGGTGGATAAGCAGTCTGGGATTCCTCAGAGAAGGATGCAAAACAGAGGGCAAAGGACACTGAAAGCAAACTTGAGACAATTAAAACTCCAAGATTTCATCAAGGGCTGGCCTTGGTTTTGGCTACTCCACAGGTGCTGGGTGACGGGTGCGGTTCTCCCCCTGGACCATCTCTCTGGGCTTAGCAGCTTGGAGTGCTGCGTGGGGTGTTGAGATTCACGCAGTCACATCCCTCCTTCTCAGAATGTGTAGCACCCACTCAGGAAGCCAGCATGACAGGGCCAGGTGCATTTGCCACCTGGGCAGAGGAGACCTTAACTGCACCTTCCTTCTTTCCCCACTTGAGGGATCTCCTCACAGGTGGCATGCTTTCTTTTCATCTTCATTCTCAGTCTTTCAGAGCACAGTGTTGTAGCTACCAAGTCATTGGCCGCTGTGTTGAGTGGCCGATGACCTGCTAGCTTAATTCACAAGAAGCCAGTTTTCAGAGGTAGGTGCACTTATGTTTGCTCAAAAAGGCAGCAATGGTACTCTGAGAGAACTTTATTCATTGTATCTGGTCCCTATTTGCCCAATTTTATGGATTTTCTTTAAAATTCCTTCCATAATTCTTGACCTTTGGACTATAACTTCAAATGATTATAGACACTGGCCTGTGCTGTCTCACCTTTCTTTTTATATATGAAAATGAACAGTACAAAGCACAGACCCAGGTCTTAAAATAAATAAGCTCATTCAAAAGAAATCAAGCTACAATTAAGTGAAGACATATTACAAATTTAAGAACATCACCATCGCACTAGCAGCACATTAAGGCCACCAGTGCTCAAGGATCTTGGCTATCCCATTGCTTTGACATTGAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGCTGTCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGCGGGATATAGTCTGGTGGTGCGCCGTTTTTTAAGTCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCACACAGTGCACACACCCACTGGCCTGCATCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGGTCTGGATTCGGCATTACATGTCTTAACGGGAAAAATCAACTCAAGATGGATTAAGGACTTAAACCTAAGACTTGAAACTATAAAAATTCTAGAAGATAACATTGGAAAAACCCTTCTAGACATTGACTTAGATAAGTATTTCATGACCAAGAACCCAAAAGCAAATGCAATAAAAACAAAGATAAATAACTAGGACCTAACTGAACTAAGAGCTTTTGTGCAGCAAAAAGAACAGTCAGCAGAGTAAACAGACAACCTACAGAGTGGGAGAAAATCTTCACAATCTATACATCTGACAAAGGACTAATATTCAGAATCCACAACAAACACAAATCAGTGAAAAAATCCTATCAAAAAGTGGGCTAAGGACATAAATAGACAATTCTCAAAAGAAGATATACAAACGTCCAATAAACATGCAAAAAATGCTCAACATCACTAATGATCAGGGAAATGCAAATCAAAACCACAATGTGATATCACTTTGCTCCTGCAAGAATGGCATAATCAAAAAATTGAAAAACAGTAGATGTTGGCGTGGGTGTGGTGATAAGGGAACACTTCTACACTGATACATGATTCAGAGAAGAGCTAAAGATGTTTCCAGTTCCAGGGAACTTTGATAGGAGAGTTGTGAGTTTACATCACAGATAAATCCTCATTTGATCAACAAGTATTCGTTAGCACTTGCTATATTCCACTCTTCGAAGGTACTGGCCATATAACCTTGAACAAACAAGAGTTTTACTTTCTTAGAGCCTGTAGTACGTAATTCCAGATAATGGTGATAAATGTCATAAGAGAGGACTAGCAAAGCACTCAGTAAATTTAGAAAGCAAGGAGCACATCCATCCAGGAAGCTTTCAAGGAGAAGATGGGCCTTAAAGTAAAGGCAGGGGTCTGCCAGCTAAAGAAAGGGTCTAAGGCTTCCAGGTACTACTCTGCCTTTGGACTGACTCATGGCCTTGAACCTTCTCTCCCCGTTTTAATTTCCTCACTCTTAAGAAAGTACACGAGTGATGGAAAGAATTCTGTTAGAAAATGACTTGATAGAATACAGAATGAGCTCCGAGGGAGGGAGAATTTAACCACTGCCATAGATAGGTGCTGCCACACAAAGTTGTTGTGAGAAGTAATTAGTCTGGCGGATCTGGGGAAGAATGTTGATTTGTTGAATCAACAATTATTTATTGGGTACCTACTACATTACCAGTGACAAAGACTTTCCCTTGACCAAAACTTTAGTCAGGCTCCTCTGAGTCCTCTGATTGACCTTGAACTTCCCCCTGTGTCCTTATAGAATCCCATTTGAGCAACAATCCTCCTAAGTCAGGTTAGAAAAAATTCTCCACCCTTGGAATTCCTTGATATCTTATCACCCTGGCCTGCCTTCGGCCATAATCCTATCAAGTTGATTTAGCCAGAAAACCTTTATCCTTGATATTTCCTGTTAGTAATTT</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:NONHSAG016552]]

Revision as of 12:58, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT041744

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3353 nt

Genomic location

chr15-:39692630..39835728

Exon number

10

Exons

39692630..39693153,39705269..39705633,39711312..39711853,39712744..39713224,39724647..39725149,39731191..39731698,39749357..39749410,39787474..39787541,39804606..39804838,39835653..39835728

Genome context

Sequence
000001 GAGTCACTTT TTAGTGCTGC CAAGGAAGTC CTCTGGCTAT CACAATTTGA TTTCAATAGA CAATTGATCA GCTCCCACCC 000080
000081 CTGCAGATGG CTCCTTCATG AAGATCTCCC CATTTGGAAC ACAACATCTG TTTCCTGCTG GGACCCTGAC TGACACAAGG 000160
000161 GTCAAAATAA GCTCCTCCAT GGGAAGCATT GAGAGAGGCA GAAAATAAAG AGAAGGAAGA TAATACTATC CATTCATTGC 000240
000241 AGTCGTCTAT GTGCTAAACA CTGTGTGAAG CATTTTGCAT GTATTCAATA AATATTTACT CAATGCTTTC AGTTCATATT 000320
000321 CTGGCCCTAC CGCTCATAAT TCCTTATTAG ATAGTAGCTA CTATTTCTCC AAAACAACAG GATGAAATGT AAACTGAGTG 000400
000401 TCCGGTGGCC AAACCAAGGC CTCCTCTTCC CTTATTCAGG GAAGTGTTTT TATCAGCTTC TTTCTAACAC AGACCATTTT 000480
000481 CCTGCAGTAA CATGAAAGGC ACTGCACGCG CATTTTCATA GCGGGGGATG TTGAGGGAAG TCTAGACTCA GACAGTACTG 000560
000561 ATATGGGCTG CGTGGGTGAG GTGGTGGATA AGCAGTCTGG GATTCCTCAG AGAAGGATGC AAAACAGAGG GCAAAGGACA 000640
000641 CTGAAAGCAA ACTTGAGACA ATTAAAACTC CAAGATTTCA TCAAGGGCTG GCCTTGGTTT TGGCTACTCC ACAGGTGCTG 000720
000721 GGTGACGGGT GCGGTTCTCC CCCTGGACCA TCTCTCTGGG CTTAGCAGCT TGGAGTGCTG CGTGGGGTGT TGAGATTCAC 000800
000801 GCAGTCACAT CCCTCCTTCT CAGAATGTGT AGCACCCACT CAGGAAGCCA GCATGACAGG GCCAGGTGCA TTTGCCACCT 000880
000881 GGGCAGAGGA GACCTTAACT GCACCTTCCT TCTTTCCCCA CTTGAGGGAT CTCCTCACAG GTGGCATGCT TTCTTTTCAT 000960
000961 CTTCATTCTC AGTCTTTCAG AGCACAGTGT TGTAGCTACC AAGTCATTGG CCGCTGTGTT GAGTGGCCGA TGACCTGCTA 001040
001041 GCTTAATTCA CAAGAAGCCA GTTTTCAGAG GTAGGTGCAC TTATGTTTGC TCAAAAAGGC AGCAATGGTA CTCTGAGAGA 001120
001121 ACTTTATTCA TTGTATCTGG TCCCTATTTG CCCAATTTTA TGGATTTTCT TTAAAATTCC TTCCATAATT CTTGACCTTT 001200
001201 GGACTATAAC TTCAAATGAT TATAGACACT GGCCTGTGCT GTCTCACCTT TCTTTTTATA TATGAAAATG AACAGTACAA 001280
001281 AGCACAGACC CAGGTCTTAA AATAAATAAG CTCATTCAAA AGAAATCAAG CTACAATTAA GTGAAGACAT ATTACAAATT 001360
001361 TAAGAACATC ACCATCGCAC TAGCAGCACA TTAAGGCCAC CAGTGCTCAA GGATCTTGGC TATCCCATTG CTTTGACATT 001440
001441 GAGCCTGGGC AATGGCGGGC GCCCCTCCCC CAGCCTCGCT GTCGCCTTGC AGTTTGATCT CAGACTGCTG TGCTAGCAAT 001520
001521 CAGCGAGACT CCGTGGGCGT AGGACCCTCC GAGCCAGGTG CGGGATATAG TCTGGTGGTG CGCCGTTTTT TAAGTCGGTC 001600
001601 TGAAAAGCGC AATATTCGGG TGGGAGTGAC CCGATTTTCC AGGTGCGTCC GTCACCCCTT TCTTTGACTC GGAAAGGGAA 001680
001681 CTCCCTGACC CCTTGCGCTT CCCAGGTGAG GCAATGCCTC GCCCTGCTTC GGCTCGCACA CAGTGCACAC ACCCACTGGC 001760
001761 CTGCATCCAC TGTCTGGCAC TCCCTAGTGA GATGAACCCG GTACCTCAGA TGGAAATGCA GAAATCACCC GTCTTCTGCG 001840
001841 TCGCTCACGC TGGGAGCTGT AGACCGGAGC TGTTCCTATT CGGCCATCTT GGGTCTGGAT TCGGCATTAC ATGTCTTAAC 001920
001921 GGGAAAAATC AACTCAAGAT GGATTAAGGA CTTAAACCTA AGACTTGAAA CTATAAAAAT TCTAGAAGAT AACATTGGAA 002000
002001 AAACCCTTCT AGACATTGAC TTAGATAAGT ATTTCATGAC CAAGAACCCA AAAGCAAATG CAATAAAAAC AAAGATAAAT 002080
002081 AACTAGGACC TAACTGAACT AAGAGCTTTT GTGCAGCAAA AAGAACAGTC AGCAGAGTAA ACAGACAACC TACAGAGTGG 002160
002161 GAGAAAATCT TCACAATCTA TACATCTGAC AAAGGACTAA TATTCAGAAT CCACAACAAA CACAAATCAG TGAAAAAATC 002240
002241 CTATCAAAAA GTGGGCTAAG GACATAAATA GACAATTCTC AAAAGAAGAT ATACAAACGT CCAATAAACA TGCAAAAAAT 002320
002321 GCTCAACATC ACTAATGATC AGGGAAATGC AAATCAAAAC CACAATGTGA TATCACTTTG CTCCTGCAAG AATGGCATAA 002400
002401 TCAAAAAATT GAAAAACAGT AGATGTTGGC GTGGGTGTGG TGATAAGGGA ACACTTCTAC ACTGATACAT GATTCAGAGA 002480
002481 AGAGCTAAAG ATGTTTCCAG TTCCAGGGAA CTTTGATAGG AGAGTTGTGA GTTTACATCA CAGATAAATC CTCATTTGAT 002560
002561 CAACAAGTAT TCGTTAGCAC TTGCTATATT CCACTCTTCG AAGGTACTGG CCATATAACC TTGAACAAAC AAGAGTTTTA 002640
002641 CTTTCTTAGA GCCTGTAGTA CGTAATTCCA GATAATGGTG ATAAATGTCA TAAGAGAGGA CTAGCAAAGC ACTCAGTAAA 002720
002721 TTTAGAAAGC AAGGAGCACA TCCATCCAGG AAGCTTTCAA GGAGAAGATG GGCCTTAAAG TAAAGGCAGG GGTCTGCCAG 002800
002801 CTAAAGAAAG GGTCTAAGGC TTCCAGGTAC TACTCTGCCT TTGGACTGAC TCATGGCCTT GAACCTTCTC TCCCCGTTTT 002880
002881 AATTTCCTCA CTCTTAAGAA AGTACACGAG TGATGGAAAG AATTCTGTTA GAAAATGACT TGATAGAATA CAGAATGAGC 002960
002961 TCCGAGGGAG GGAGAATTTA ACCACTGCCA TAGATAGGTG CTGCCACACA AAGTTGTTGT GAGAAGTAAT TAGTCTGGCG 003040
003041 GATCTGGGGA AGAATGTTGA TTTGTTGAAT CAACAATTAT TTATTGGGTA CCTACTACAT TACCAGTGAC AAAGACTTTC 003120
003121 CCTTGACCAA AACTTTAGTC AGGCTCCTCT GAGTCCTCTG ATTGACCTTG AACTTCCCCC TGTGTCCTTA TAGAATCCCA 003200
003201 TTTGAGCAAC AATCCTCCTA AGTCAGGTTA GAAAAAATTC TCCACCCTTG GAATTCCTTG ATATCTTATC ACCCTGGCCT 003280
003281 GCCTTCGGCC ATAATCCTAT CAAGTTGATT TAGCCAGAAA ACCTTTATCC TTGATATTTC CTGTTAGTAA TTT
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