Difference between revisions of "ENST00000449424.1"

Revision as of 12:59, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000449424.1
Source	Gencode19
Same with	lnc-HIC2-1:4,NONHSAT083676
Classification	sense
Length	2593 nt
Genomic location	chr22+:21821680..21825558
Exon number	8
Exons	21821680..21821903,21822183..21822491,21822604..21822720,21823068..21823124,21823233..21823351,21823563..21823635,21823783..21823823,21823906..21825558
Genome context
Sequence	000001 ATTGTGACGC CTGCCAGCCG CAGGCTGGGT CCCCGAGGCG GGCGGCATTT AGGCTCGGTC TCCACAGCCA TGGCCGCGAC 000080 000081 GCAGGAGCTG CTGCTGCAGT TGCAGAAGGA TAACCGAGAT GGTCGCCAGC GGAAGCAGGA GCTAGAGAAG CTGATGCGCG 000160 000161 GGCTCGAGGC CGAGAGCGAG AGCCTCAACC AGCGCCTGCA GGACCTGAGC GAGCGGGAGC GGAGCCTGCT GCGGAGGCGA 000240 000241 AGCCAGGCAG CGCAGCCTCT GCAAGGGGAG GCGCGCGAGG CGGCGCGGGA GCGCGCGGAG CGGGTGCGCA GAAGACTGGA 000320 000321 GGAGGCGGAG CGCCACAAGG AGTACTTGGT GAGGAAGAGT CCTGGAATGG GGCTGGACCC AGGGTGGGGT GGGGCAGGGC 000400 000401 GGGCGGAAGG GGGCAGGATC CGGGGGTGGG GTGAGGTAGG ACCGGCGGAG AGGTCGGCAC CGCCCCAGGA CCCCGTCCGC 000480 000481 AGGAGCAGCA CAGCAGGCAG CTGCAGGAGC AGTGGGAGGA GCTGTCGAGT CAGAAGCCCG GTAAACCCCG CCCTTACAAG 000560 000561 CCCCGCCCCT AGCTCTTCTA CTACGGAGGG GAACTGCAGA GCCAGAAGAG CACGGAGCAG CAACTCGCAG CCCAATTGGT 000640 000641 GACGCTGCAG AATGAACTGG AGCTGGCGGA GACCAAATGC GCCTTGCAGG AGGAGAAGCT GCAGCAGGAC GCGCTGCAGA 000720 000721 CAGCGGAGGC CTGGGCCATA TTCCAGGAGC AGACCGTAGT CCTGCAGGTG CGGCCCCACT CAGACGCCAA GGTGCCTCCC 000800 000801 GCCTCTCCTC CCCCAGACCT GGGGCGGTGT GACGGGCAGC TTCGCGGAGT GCAGTACAGC ACCGAATCGC TCATGGAGGA 000880 000881 GATGGCCAGG GCGGACCGAG AGACGCGGCT GTTCGGCGGC CCTCGCGCGC TGGCCATCAG GCGGTGCGTG CTGGGCGCGC 000960 000961 TGCAGGTGCT GCTGACGCTG CCGCTCCTCT TCCTGGGGCT GTCGCTGCTC TGGACGGTGC TGTTGGACCC CGGCGCCGTC 001040 001041 TCCGCGTGGC TCTGGAGCCT CACCTCGGAG ACGACGCTGC GCCGCCTGCG CTACACGCTG TCCCCGCTGC TGGAGCTGCG 001120 001121 CGCTAACGGG CTTCTGCCAA CCTAAGTGCA GCGCCCCGCG CCTGGCTCCA GGTGGACTCC AGGGCACCTG GCTTTATTTC 001200 001201 TGGTGCACTC CTCTCCTGAG AGTGTAGACC AAGGTTGCCT AATAAACTCA AGGGATGAAG CTCGTGGGTT CGTCGTCTGT 001280 001281 CTCCCATGTC ATGTAGGAGC TTGACTGGCT TTTCAGCCTC CAAAGATTCC TTCCTTCCTT ACAGCTCATG GATTTAGAGC 001360 001361 CACTCCCCAG TATTGTAAAC AGCATTTTTA GTTTTTCAGG ATACATAATT TGCCGTATTG CCAGAAACTT GTACATAGCA 001440 001441 TTTGACACTT TGCCAATCTG ACAAGCTGCC TTTTCAAGTA TTGTGATTTG AAATTATTTC TACTATATTT GAATTTATTT 001520 001521 CTACCATTTG TAACATGTTG ATCCTGATTT TTCAATGCTC CCCTTTCCTT CTGTTTATTT GGGAAGTCAC ACTCTGTATT 001600 001601 CTGGTATTCT TACTACTTGA GCTCAGCTCA TCGCTGTCAT CTTCCCCTAA ACCGCCTTAA AGCATCTTAG GTCTTTTCCC 001680 001681 TCTGATCACA TGTGCTACTT TTTTTTTTCT TTTCTTTGGA GACGGAGTCT TGCTCTGCGC CCAGGATGGA GTGCAGTGGC 001760 001761 ATGATCTCGG CTCACTGCAA GCTCTGCCTC CCGGGTTCCA GCGATTCTCC TGCCTCAGCC TCCCAAGTAG CTGGGACTTC 001840 001841 AGACGCCCGC CATCATGCCC GTTTAATTTT TTGTATTTTT TGTAGAGACA GAGTTTCACT GTGTTAGCCA GGATGGTCTC 001920 001921 GATCTCCTGA CCTCGTGATC CGCCCACCTT GGCCTCCCCA AAGTGCTGGG ATT

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>ATTGTGACGCCTGCCAGCCGCAGGCTGGGTCCCCGAGGCGGGCGGCATTTAGGCTCGGTCTCCACAGCCATGGCCGCGACGCAGGAGCTGCTGCTGCAGTTGCAGAAGGATAACCGAGATGGTCGCCAGCGGAAGCAGGAGCTAGAGAAGCTGATGCGCGGGCTCGAGGCCGAGAGCGAGAGCCTCAACCAGCGCCTGCAGGACCTGAGCGAGCGGGAGCGGAGCCTGCTGCGGAGGCGAAGCCAGGCAGCGCAGCCTCTGCAAGGGGAGGCGCGCGAGGCGGCGCGGGAGCGCGCGGAGCGGGTGCGCAGAAGACTGGAGGAGGCGGAGCGCCACAAGGAGTACTTGGTGAGGAAGAGTCCTGGAATGGGGCTGGACCCAGGGTGGGGTGGGGCAGGGCGGGCGGAAGGGGGCAGGATCCGGGGGTGGGGTGAGGTAGGACCGGCGGAGAGGTCGGCACCGCCCCAGGACCCCGTCCGCAGGAGCAGCACAGCAGGCAGCTGCAGGAGCAGTGGGAGGAGCTGTCGAGTCAGAAGCCCGGTAAACCCCGCCCTTACAAGCCCCGCCCCTAGCTCTTCTACTACGGAGGGGAACTGCAGAGCCAGAAGAGCACGGAGCAGCAACTCGCAGCCCAATTGGTGACGCTGCAGAATGAACTGGAGCTGGCGGAGACCAAATGCGCCTTGCAGGAGGAGAAGCTGCAGCAGGACGCGCTGCAGACAGCGGAGGCCTGGGCCATATTCCAGGAGCAGACCGTAGTCCTGCAGGTGCGGCCCCACTCAGACGCCAAGGTGCCTCCCGCCTCTCCTCCCCCAGACCTGGGGCGGTGTGACGGGCAGCTTCGCGGAGTGCAGTACAGCACCGAATCGCTCATGGAGGAGATGGCCAGGGCGGACCGAGAGACGCGGCTGTTCGGCGGCCCTCGCGCGCTGGCCATCAGGCGGTGCGTGCTGGGCGCGCTGCAGGTGCTGCTGACGCTGCCGCTCCTCTTCCTGGGGCTGTCGCTGCTCTGGACGGTGCTGTTGGACCCCGGCGCCGTCTCCGCGTGGCTCTGGAGCCTCACCTCGGAGACGACGCTGCGCCGCCTGCGCTACACGCTGTCCCCGCTGCTGGAGCTGCGCGCTAACGGGCTTCTGCCAACCTAAGTGCAGCGCCCCGCGCCTGGCTCCAGGTGGACTCCAGGGCACCTGGCTTTATTTCTGGTGCACTCCTCTCCTGAGAGTGTAGACCAAGGTTGCCTAATAAACTCAAGGGATGAAGCTCGTGGGTTCGTCGTCTGTCTCCCATGTCATGTAGGAGCTTGACTGGCTTTTCAGCCTCCAAAGATTCCTTCCTTCCTTACAGCTCATGGATTTAGAGCCACTCCCCAGTATTGTAAACAGCATTTTTAGTTTTTCAGGATACATAATTTGCCGTATTGCCAGAAACTTGTACATAGCATTTGACACTTTGCCAATCTGACAAGCTGCCTTTTCAAGTATTGTGATTTGAAATTATTTCTACTATATTTGAATTTATTTCTACCATTTGTAACATGTTGATCCTGATTTTTCAATGCTCCCCTTTCCTTCTGTTTATTTGGGAAGTCACACTCTGTATTCTGGTATTCTTACTACTTGAGCTCAGCTCATCGCTGTCATCTTCCCCTAAACCGCCTTAAAGCATCTTAGGTCTTTTCCCTCTGATCACATGTGCTACTTTTTTTTTTCTTTTCTTTGGAGACGGAGTCTTGCTCTGCGCCCAGGATGGAGTGCAGTGGCATGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCCAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTTCAGACGCCCGCCATCATGCCCGTTTAATTTTTTGTATTTTTTGTAGAGACAGAGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTTGGCCTCCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCTGGCCAACATTTTCTCCAGATATCTTACTGAGTCCTAATTTCCACTGTGGCCAGAGAATACACTCTGCATGATTTTAATTCTATCTCATTTACTGAGACTTGTTTTGTGGCCCAGCACAAAGCTTGTAATGAACACTGAGAAGTGTATTGTTGCTGTTGACAGAGTGATTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCAGGCTGGAGTACAGTGGTGTGCAATCTCGGCTCACTCCAACCTCCACCTACTAGGTTCAAGTGATTGTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGATGCATTCCACCATGCCCAGCTAATTTTTGTATTTTTAGCAGAGACAGGGTTTCACCGTGTTGGCCAGGATGGTCTTGATCTCTTGACATTGTGATCCGCCTGGCTTGGCCTCCCAAAGCGCTGGGATTACAGGCATGAGCCACCGTGCCAGGCCAACAGAGTGTGTTCTAAATACCCAGCAGGTCCAGGTGAGTGACAGGCTTGTTCAGGGCTCCTGTGTTTACTTTCTTGTTGGTAGCGCCGTCAATTGCTTATTGTGAAATGCCCCTTCATAAACACCCATACACATTTTG</dnaseq>|
 }}
-[[Category:Sense]]
+[[Category:Sense]][[Category:lnc-HIC2-1]]