Difference between revisions of "NONHSAT136935"
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sequence = <dnaseq>tgggagtttggggagggcaaatcaagggtaattcccaggtttttgccctgaggaactggaaacgtggagttgacattgactgaacttgatgagactgggaggagcaggctgggaagatcgggagctgggctttgggcatgtgaagtttgagGCCATCTAAGGACTTTATCCTGGGGGCTCCAACAGGTTGTGGGTATTCTCATCCTGCTGATGGCCCTCCAGGAGGGGCTGGGGGACTTTCAGGAGAATTTTATCCCACATCTCTTCCCCTCCAGATGTTTTCAAGAATGCTCTCCGCCTGGGGACCTTCTCGGCTGTGCTGGTCACCTATGCAGCCAGCGCCCTCCTACATGGCTTCAGTTTCCACCTGGCTGCGGTCCTGCTGTCCCTGGCTTTTATCACTTACGTGGAGCATGTCCTCCGGAAGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCAGACTGTTCGCACCAGCATCGCTTGGTGAGGGTTCAGCCTGGGCAACCTTGTGCCCAACACTCCCTGTCAAAAATGTTCCTTCTATCTCTATCTTGTATGTGTCTCAG</dnaseq>| | sequence = <dnaseq>tgggagtttggggagggcaaatcaagggtaattcccaggtttttgccctgaggaactggaaacgtggagttgacattgactgaacttgatgagactgggaggagcaggctgggaagatcgggagctgggctttgggcatgtgaagtttgagGCCATCTAAGGACTTTATCCTGGGGGCTCCAACAGGTTGTGGGTATTCTCATCCTGCTGATGGCCCTCCAGGAGGGGCTGGGGGACTTTCAGGAGAATTTTATCCCACATCTCTTCCCCTCCAGATGTTTTCAAGAATGCTCTCCGCCTGGGGACCTTCTCGGCTGTGCTGGTCACCTATGCAGCCAGCGCCCTCCTACATGGCTTCAGTTTCCACCTGGCTGCGGTCCTGCTGTCCCTGGCTTTTATCACTTACGTGGAGCATGTCCTCCGGAAGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCAGACTGTTCGCACCAGCATCGCTTGGTGAGGGTTCAGCCTGGGCAACCTTGTGCCCAACACTCCCTGTCAAAAATGTTCCTTCTATCTCTATCTTGTATGTGTCTCAG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG054421]] | + | [[Category:Sense]][[Category:NONHSAG054421]][[Category:Transcripts]] |
Latest revision as of 02:42, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT136935 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
585 nt |
| Genomic location |
chrX+:48373830..48374617 |
| Exon number |
3 |
| Exons |
48373830..48374181,48374278..48374341,48374449..48374617 |
| Genome context |
|
| Sequence |
000001 tgggagtttg gggagggcaa atcaagggta attcccaggt ttttgccctg aggaactgga aacgtggagt tgacattgac 000080
000081 tgaacttgat gagactggga ggagcaggct gggaagatcg ggagctgggc tttgggcatg tgaagtttga gGCCATCTAA 000160 000161 GGACTTTATC CTGGGGGCTC CAACAGGTTG TGGGTATTCT CATCCTGCTG ATGGCCCTCC AGGAGGGGCT GGGGGACTTT 000240 000241 CAGGAGAATT TTATCCCACA TCTCTTCCCC TCCAGATGTT TTCAAGAATG CTCTCCGCCT GGGGACCTTC TCGGCTGTGC 000320 000321 TGGTCACCTA TGCAGCCAGC GCCCTCCTAC ATGGCTTCAG TTTCCACCTG GCTGCGGTCC TGCTGTCCCT GGCTTTTATC 000400 000401 ACTTACGTGG AGCATGTCCT CCGGAAGCGC CTGGCTCGGA TCCTCAGTGC CTGTGTCTTG TCAAAGCGGT GCCCGCCAGA 000480 000481 CTGTTCGCAC CAGCATCGCT TGGTGAGGGT TCAGCCTGGG CAACCTTGTG CCCAACACTC CCTGTCAAAA ATGTTCCTTC 000560 000561 TATCTCTATC TTGTATGTGT CTCAG |
Predicted Small Protein
| Name | NONHSAT136935_smProtein_275:505 |
| Length | 77 |
| Molecular weight | 8376.6549 |
| Aromaticity | 0.118421052632 |
| Instability index | 82.6526315789 |
| Isoelectric point | 9.87884521484 |
| Runs | 14 |
| Runs residual | 0.0428009679371 |
| Runs probability | 0.0484770484771 |
| Amino acid sequence | MFSRMLSAWGPSRLCWSPMQPAPSYMASVSTWLRSCCPWLLSLTWSMSSGSAWLGSSVPV SCQSGARQTVRTSIAW |
| Secondary structure | LLLHHHLLLLLLLLLLLLLLLLLLHHHHHHHHHHHLLHHHHHEEEELLLLLEEELLLEEE ELLLLLEEEEEEEEEL |
| PRMN | - |
| PiMo | - |
