Difference between revisions of "NONHSAT044125"

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sequence = <dnaseq>ggatgtgagggcaatctggctgcaacatttgtcaccccattaatctccagcgttcattcgactgatctggctggctagatgggtgtccccttcctccctcactgctccatgtgcatccctcctgaagctgcatgcttggtcgaagaggacgaccatcctcgatagaggaggactggtctttggtcaagggtatatgggtagctgtgctcccctgctagaacctccaaacaagctatcaagaactacctgagactgggtaatttataaagaaaagaagtttagttgcctcatggttctgcaggc</dnaseq>|
 
sequence = <dnaseq>ggatgtgagggcaatctggctgcaacatttgtcaccccattaatctccagcgttcattcgactgatctggctggctagatgggtgtccccttcctccctcactgctccatgtgcatccctcctgaagctgcatgcttggtcgaagaggacgaccatcctcgatagaggaggactggtctttggtcaagggtatatgggtagctgtgctcccctgctagaacctccaaacaagctatcaagaactacctgagactgggtaatttataaagaaaagaagtttagttgcctcatggttctgcaggc</dnaseq>|
 
}}
 
}}
[[Category:Intronic(S)]][[Category:NONHSAG017027]]
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[[Category:Intronic(S)]][[Category:NONHSAG017027]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 21:58, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT044125

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

303 nt

Genomic location

chr15-:58996051..58996353

Exon number

1

Exons

58996051..58996353

Genome context

Sequence
000001 ggatgtgagg gcaatctggc tgcaacattt gtcaccccat taatctccag cgttcattcg actgatctgg ctggctagat 000080
000081 gggtgtcccc ttcctccctc actgctccat gtgcatccct cctgaagctg catgcttggt cgaagaggac gaccatcctc 000160
000161 gatagaggag gactggtctt tggtcaaggg tatatgggta gctgtgctcc cctgctagaa cctccaaaca agctatcaag 000240
000241 aactacctga gactgggtaa tttataaaga aaagaagttt agttgcctca tggttctgca ggc
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Predicted Small Protein

Name NONHSAT044125_smProtein_131:217
Length 29
Molecular weight 3155.6939
Aromaticity 0.0714285714286
Instability index 75.9785714286
Isoelectric point 7.97662353516
Runs 5
Runs residual 0.0246478873239
Runs probability 0.0360007065889
Amino acid sequence MLGRRGRPSSIEEDWSLVKGIWVAVLPC
Secondary structure LLLLLLLLLLHHHHHHHHLLEEEEEELL
PRMN -
PiMo -