Difference between revisions of "NONHSAT021823"

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sequence = <dnaseq>CTCTACCCACAACTCCCCGGGGTCGCATGCGGTCAACGTATGCGCGTGCGCTCGCCGTAGCCCCGCCCCCAAATCCCGTGGGCCTCTGCGGCATGGTATTTAATCGTCTCCCCGGGGAGATTCGTTCTCATTTTTCTACTGCTCGTGGTAAGTGGCTTCGTGGTCTTTATAGCTGTTACTCTTTTGTACTTTGTCTTTTTCTTTTATTTTCTTTTGAGCGATTGTGCGAACATAGCATAGCACGCACTATGCCTTCTGTGTTGTAGCTGCCTGGCCAGGGCGACTGGCGGATAAGGTCTTGTGCGTGGCCTCGAGGCTTAAAAGTAGCAGTGGGGCTTTGTGAAGGACAAAATGGCGATGGCGGGCCGTGTAGGTCCCCCTTCCTATGATGAGGACCTTTTCACAGACCTGTACTGAGCTCCGTGAGGATAAATAACTCTGAGGAGATGGGCCCTGCAAGCCTCTTGCTTAGCCGTCTGTTCAGAAAATAGCGTTTTCGAAATGCCCTGAGTTGACCTAATGTCTTATTGGGCTCCTGTCTGCAGGATTTACGCGCACGTTGGAACCGAAGAGAGCTCTGTTGTTGCAATGTTCAGCCCACAAGAGCTTACTGGTGAAGGAATGGGACAAGACCCATCTTTATGCAAAGCCAGCGTTACAGTAATGTTCCAGGTAGGTGTACATGGTTTATGCTCTTACAGAGGAGACCTTGTAGATAACCACTCCATGATGAACACAAAATGACAAGCATATGGCTGAACTTTCAAGTGATGTCATCTTACTACTGAGAAGTGAGAGAGAGGTCTTAAGGGGTCTTTGAATGACTATTTTTAGGTACATAAAATGCTTTCCTCTGTTGTCTACAGCATCTCATAATCTATCCTGGGGAATTCAGCTGCCTCCCAGGGTGAATACAGGTAATTATCCAAATTGGTGTATGTCATCTTTGTAAATGTTCAAGAAAACAAGTGGCCGGCGGAACAATGTTTTTTGGCGCCTTCCATCTTGTTCCTCTTGAAATGATTTTCTGGGGAGGGAGATCGCAACCCGGTACTACAGTTCTTGTAAGGGTGTGCTGTTACCCTCATCCATATATCGATCACGTTACTGTCAGATGATTTGAATTGATAAGCTGATGTTCTGTGAGGTACAAAAGTTAATAGCATGTTAGAGTTCTGATGGCAGTTGTTGTTTATGAATAAGCTTCATTCCATCCTAATACCTTAAAATAACTAATTTGCTTTCCTTTCCAGGTATTCCTGATGACAGTCTGCCTCTATCTTACAGAGCAGCTTGTTGCTATATACCATTGAAAAGCCTTCAGAGCTGAGAGGTTAGTTGATATTTTTTGTTCCTTACAGCTTATGCCACCAAGTAGGCAGTTTCTATGATGAATCAAACTAGCTCACTATGACCGACAGTGAAAATACATGAACACCTGAGAAACTGGAGAACGCAGGGAGTGGGGGGTAACCATGTCTGAGGAATCTTTCACCCACAGCTTTGTTTTTCTCTAGGTACTACTAACCAATAACCTGCTTGGCTCAAAGGTGAGTAATTTCACGGTATTCAATGCACTCAGTATATAGGGTAGGAAAAAGTGCCTTTTTAGGCCTGTGTTTGTGATGACTTACATGGAATCTCGTTCGGCTGATGACTTGCTGTTGAGACTCTGAAATCTGATTTTCTGAGAATGATGGGTGGGAACAACATAATGCGGGATATGAGAAGCACTACTGACTTGGTCTTCCTCCTTTCAGGGCCAGCACCTTCTCTCTAAAGCCCAAGAGGAGTTTGAGGTAAATGGCTTTGCAATAGTTACCATCAATGGCTGCTATATAAAATTTTCTGTGATTTTTGTGTGTGATAGCACTGTGGTCTGGGTGAATGTACACAGACATAACTGGCTTAACCCAAAGTCTTTGATCTCCTGAACCACCAGTGATGAATTGCTGCTCACCAGTGATGAGTTGAATACCGCCCCAGTCTGATCAATGTGTGACTGAAAGGTATTTTCTGAGCTGTGAGCCTGCCTTCCAGTGACATGTTCTAAAAATTGCAAGTTATTTGAGGAGGCTTTACAGCCAATAGGAAGTTCTTGGGCTAAGTAGTGTTTCCTATAAAATGTGCCCTGAAACTTCTTTCTGCCAAGCAATAGATACAATTGAGAGATTGTAAAATGTGACATAGAATGAAAGTCTCTCAAGACTACATTTTTCTTTCTTGATTTTGCAGGAAAACTAGGTGTCTGTGTTCACTCCAGGCTGAAGTTACAGGTGAGTAAACCTAAATGTAAGGTGGACTATGCTAAAAATTCCCAATGAAGAAACTTTCACATGTCTTACTCTCTGTCCTAGTCCCAGAGCCTGTAAAGGTGAACCCACTGGGACTGGCTGGGGGAGAAGAGGAAGATTTGTTCCAGAAGGAACTGTCTGAGGGATGATAAAGATTTCTATACAGAGAAAGGGAGTAATCATCACTTGTTGAAAACATTGGTTTTATTTTTTCCAGGTCTGAGCAAATAAGGTGTATAAAAAATGGAATCTGTCTTGGAGGACATCAGAAGGTGAATTTTCCAAGTTCTTGGACAACCTAGCTGTTGAAAAGCTTTCTGGGTTTGGGGGGTATTTCAGATGTACCTTAAAGTGTTAGCAGACACAGATTAAGACACTGGGAGCCAATGAAACAGCAGTTGAGGGTTTGCTGTGTATCACATTTCTGTATTTTATCACCCCCTTCCTGCAACATTATTTATCTGGAATCTACCTGCCCttttgttttttagatacaagggcttggttttgttacccaggctggtttcaaggccatagctttaagagatcctctcaccacagatttccaaagtgctgggattgcaggtgtgattcatggcacccagACTTTGCTGCCTTTCTTACATGATCCAGGCCCAGAACCCAAACTCAGGCACTGTATAGATGACCACTTTCGTAAACTACTGACCTAGCTTGTTGCCAATTGTTGATTGAACTTCCCATAACTCCACTTCGTGTCTGTTCCTCTGTATACAGCCACCTTCTGTTCCCGTCATGAGCCTTTAGGTCTCCATTTGCATATTGCAAATACTATGTTCCATGTAGGTAGCTCATTCAGGGCCTTGCTCTTCACTTCAAAAAAGGTTCCCTTGAGGACTGGCTGTCAATTTGTGTTGCTGTGTTGGTTGTTGATGAAAATAATAAAATGATTGATTACATAGTCCTGTTTACTTTTTTTGTGTGTATGTGTCTCTTAGCATCAGTGTGTAA</dnaseq>|
 
sequence = <dnaseq>CTCTACCCACAACTCCCCGGGGTCGCATGCGGTCAACGTATGCGCGTGCGCTCGCCGTAGCCCCGCCCCCAAATCCCGTGGGCCTCTGCGGCATGGTATTTAATCGTCTCCCCGGGGAGATTCGTTCTCATTTTTCTACTGCTCGTGGTAAGTGGCTTCGTGGTCTTTATAGCTGTTACTCTTTTGTACTTTGTCTTTTTCTTTTATTTTCTTTTGAGCGATTGTGCGAACATAGCATAGCACGCACTATGCCTTCTGTGTTGTAGCTGCCTGGCCAGGGCGACTGGCGGATAAGGTCTTGTGCGTGGCCTCGAGGCTTAAAAGTAGCAGTGGGGCTTTGTGAAGGACAAAATGGCGATGGCGGGCCGTGTAGGTCCCCCTTCCTATGATGAGGACCTTTTCACAGACCTGTACTGAGCTCCGTGAGGATAAATAACTCTGAGGAGATGGGCCCTGCAAGCCTCTTGCTTAGCCGTCTGTTCAGAAAATAGCGTTTTCGAAATGCCCTGAGTTGACCTAATGTCTTATTGGGCTCCTGTCTGCAGGATTTACGCGCACGTTGGAACCGAAGAGAGCTCTGTTGTTGCAATGTTCAGCCCACAAGAGCTTACTGGTGAAGGAATGGGACAAGACCCATCTTTATGCAAAGCCAGCGTTACAGTAATGTTCCAGGTAGGTGTACATGGTTTATGCTCTTACAGAGGAGACCTTGTAGATAACCACTCCATGATGAACACAAAATGACAAGCATATGGCTGAACTTTCAAGTGATGTCATCTTACTACTGAGAAGTGAGAGAGAGGTCTTAAGGGGTCTTTGAATGACTATTTTTAGGTACATAAAATGCTTTCCTCTGTTGTCTACAGCATCTCATAATCTATCCTGGGGAATTCAGCTGCCTCCCAGGGTGAATACAGGTAATTATCCAAATTGGTGTATGTCATCTTTGTAAATGTTCAAGAAAACAAGTGGCCGGCGGAACAATGTTTTTTGGCGCCTTCCATCTTGTTCCTCTTGAAATGATTTTCTGGGGAGGGAGATCGCAACCCGGTACTACAGTTCTTGTAAGGGTGTGCTGTTACCCTCATCCATATATCGATCACGTTACTGTCAGATGATTTGAATTGATAAGCTGATGTTCTGTGAGGTACAAAAGTTAATAGCATGTTAGAGTTCTGATGGCAGTTGTTGTTTATGAATAAGCTTCATTCCATCCTAATACCTTAAAATAACTAATTTGCTTTCCTTTCCAGGTATTCCTGATGACAGTCTGCCTCTATCTTACAGAGCAGCTTGTTGCTATATACCATTGAAAAGCCTTCAGAGCTGAGAGGTTAGTTGATATTTTTTGTTCCTTACAGCTTATGCCACCAAGTAGGCAGTTTCTATGATGAATCAAACTAGCTCACTATGACCGACAGTGAAAATACATGAACACCTGAGAAACTGGAGAACGCAGGGAGTGGGGGGTAACCATGTCTGAGGAATCTTTCACCCACAGCTTTGTTTTTCTCTAGGTACTACTAACCAATAACCTGCTTGGCTCAAAGGTGAGTAATTTCACGGTATTCAATGCACTCAGTATATAGGGTAGGAAAAAGTGCCTTTTTAGGCCTGTGTTTGTGATGACTTACATGGAATCTCGTTCGGCTGATGACTTGCTGTTGAGACTCTGAAATCTGATTTTCTGAGAATGATGGGTGGGAACAACATAATGCGGGATATGAGAAGCACTACTGACTTGGTCTTCCTCCTTTCAGGGCCAGCACCTTCTCTCTAAAGCCCAAGAGGAGTTTGAGGTAAATGGCTTTGCAATAGTTACCATCAATGGCTGCTATATAAAATTTTCTGTGATTTTTGTGTGTGATAGCACTGTGGTCTGGGTGAATGTACACAGACATAACTGGCTTAACCCAAAGTCTTTGATCTCCTGAACCACCAGTGATGAATTGCTGCTCACCAGTGATGAGTTGAATACCGCCCCAGTCTGATCAATGTGTGACTGAAAGGTATTTTCTGAGCTGTGAGCCTGCCTTCCAGTGACATGTTCTAAAAATTGCAAGTTATTTGAGGAGGCTTTACAGCCAATAGGAAGTTCTTGGGCTAAGTAGTGTTTCCTATAAAATGTGCCCTGAAACTTCTTTCTGCCAAGCAATAGATACAATTGAGAGATTGTAAAATGTGACATAGAATGAAAGTCTCTCAAGACTACATTTTTCTTTCTTGATTTTGCAGGAAAACTAGGTGTCTGTGTTCACTCCAGGCTGAAGTTACAGGTGAGTAAACCTAAATGTAAGGTGGACTATGCTAAAAATTCCCAATGAAGAAACTTTCACATGTCTTACTCTCTGTCCTAGTCCCAGAGCCTGTAAAGGTGAACCCACTGGGACTGGCTGGGGGAGAAGAGGAAGATTTGTTCCAGAAGGAACTGTCTGAGGGATGATAAAGATTTCTATACAGAGAAAGGGAGTAATCATCACTTGTTGAAAACATTGGTTTTATTTTTTCCAGGTCTGAGCAAATAAGGTGTATAAAAAATGGAATCTGTCTTGGAGGACATCAGAAGGTGAATTTTCCAAGTTCTTGGACAACCTAGCTGTTGAAAAGCTTTCTGGGTTTGGGGGGTATTTCAGATGTACCTTAAAGTGTTAGCAGACACAGATTAAGACACTGGGAGCCAATGAAACAGCAGTTGAGGGTTTGCTGTGTATCACATTTCTGTATTTTATCACCCCCTTCCTGCAACATTATTTATCTGGAATCTACCTGCCCttttgttttttagatacaagggcttggttttgttacccaggctggtttcaaggccatagctttaagagatcctctcaccacagatttccaaagtgctgggattgcaggtgtgattcatggcacccagACTTTGCTGCCTTTCTTACATGATCCAGGCCCAGAACCCAAACTCAGGCACTGTATAGATGACCACTTTCGTAAACTACTGACCTAGCTTGTTGCCAATTGTTGATTGAACTTCCCATAACTCCACTTCGTGTCTGTTCCTCTGTATACAGCCACCTTCTGTTCCCGTCATGAGCCTTTAGGTCTCCATTTGCATATTGCAAATACTATGTTCCATGTAGGTAGCTCATTCAGGGCCTTGCTCTTCACTTCAAAAAAGGTTCCCTTGAGGACTGGCTGTCAATTTGTGTTGCTGTGTTGGTTGTTGATGAAAATAATAAAATGATTGATTACATAGTCCTGTTTACTTTTTTTGTGTGTATGTGTCTCTTAGCATCAGTGTGTAA</dnaseq>|
 
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[[Category:Intergenic]][[Category:NONHSAG008552]]
+
[[Category:Intergenic]][[Category:NONHSAG008552]][[Category:Transcripts]]

Latest revision as of 20:35, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT021823

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3284 nt

Genomic location

chr11-:62619410..62623483

Exon number

4

Exons

62619410..62620153,62620283..62621536,62621991..62622688,62622896..62623483

Genome context

Sequence
000001 CTCTACCCAC AACTCCCCGG GGTCGCATGC GGTCAACGTA TGCGCGTGCG CTCGCCGTAG CCCCGCCCCC AAATCCCGTG 000080
000081 GGCCTCTGCG GCATGGTATT TAATCGTCTC CCCGGGGAGA TTCGTTCTCA TTTTTCTACT GCTCGTGGTA AGTGGCTTCG 000160
000161 TGGTCTTTAT AGCTGTTACT CTTTTGTACT TTGTCTTTTT CTTTTATTTT CTTTTGAGCG ATTGTGCGAA CATAGCATAG 000240
000241 CACGCACTAT GCCTTCTGTG TTGTAGCTGC CTGGCCAGGG CGACTGGCGG ATAAGGTCTT GTGCGTGGCC TCGAGGCTTA 000320
000321 AAAGTAGCAG TGGGGCTTTG TGAAGGACAA AATGGCGATG GCGGGCCGTG TAGGTCCCCC TTCCTATGAT GAGGACCTTT 000400
000401 TCACAGACCT GTACTGAGCT CCGTGAGGAT AAATAACTCT GAGGAGATGG GCCCTGCAAG CCTCTTGCTT AGCCGTCTGT 000480
000481 TCAGAAAATA GCGTTTTCGA AATGCCCTGA GTTGACCTAA TGTCTTATTG GGCTCCTGTC TGCAGGATTT ACGCGCACGT 000560
000561 TGGAACCGAA GAGAGCTCTG TTGTTGCAAT GTTCAGCCCA CAAGAGCTTA CTGGTGAAGG AATGGGACAA GACCCATCTT 000640
000641 TATGCAAAGC CAGCGTTACA GTAATGTTCC AGGTAGGTGT ACATGGTTTA TGCTCTTACA GAGGAGACCT TGTAGATAAC 000720
000721 CACTCCATGA TGAACACAAA ATGACAAGCA TATGGCTGAA CTTTCAAGTG ATGTCATCTT ACTACTGAGA AGTGAGAGAG 000800
000801 AGGTCTTAAG GGGTCTTTGA ATGACTATTT TTAGGTACAT AAAATGCTTT CCTCTGTTGT CTACAGCATC TCATAATCTA 000880
000881 TCCTGGGGAA TTCAGCTGCC TCCCAGGGTG AATACAGGTA ATTATCCAAA TTGGTGTATG TCATCTTTGT AAATGTTCAA 000960
000961 GAAAACAAGT GGCCGGCGGA ACAATGTTTT TTGGCGCCTT CCATCTTGTT CCTCTTGAAA TGATTTTCTG GGGAGGGAGA 001040
001041 TCGCAACCCG GTACTACAGT TCTTGTAAGG GTGTGCTGTT ACCCTCATCC ATATATCGAT CACGTTACTG TCAGATGATT 001120
001121 TGAATTGATA AGCTGATGTT CTGTGAGGTA CAAAAGTTAA TAGCATGTTA GAGTTCTGAT GGCAGTTGTT GTTTATGAAT 001200
001201 AAGCTTCATT CCATCCTAAT ACCTTAAAAT AACTAATTTG CTTTCCTTTC CAGGTATTCC TGATGACAGT CTGCCTCTAT 001280
001281 CTTACAGAGC AGCTTGTTGC TATATACCAT TGAAAAGCCT TCAGAGCTGA GAGGTTAGTT GATATTTTTT GTTCCTTACA 001360
001361 GCTTATGCCA CCAAGTAGGC AGTTTCTATG ATGAATCAAA CTAGCTCACT ATGACCGACA GTGAAAATAC ATGAACACCT 001440
001441 GAGAAACTGG AGAACGCAGG GAGTGGGGGG TAACCATGTC TGAGGAATCT TTCACCCACA GCTTTGTTTT TCTCTAGGTA 001520
001521 CTACTAACCA ATAACCTGCT TGGCTCAAAG GTGAGTAATT TCACGGTATT CAATGCACTC AGTATATAGG GTAGGAAAAA 001600
001601 GTGCCTTTTT AGGCCTGTGT TTGTGATGAC TTACATGGAA TCTCGTTCGG CTGATGACTT GCTGTTGAGA CTCTGAAATC 001680
001681 TGATTTTCTG AGAATGATGG GTGGGAACAA CATAATGCGG GATATGAGAA GCACTACTGA CTTGGTCTTC CTCCTTTCAG 001760
001761 GGCCAGCACC TTCTCTCTAA AGCCCAAGAG GAGTTTGAGG TAAATGGCTT TGCAATAGTT ACCATCAATG GCTGCTATAT 001840
001841 AAAATTTTCT GTGATTTTTG TGTGTGATAG CACTGTGGTC TGGGTGAATG TACACAGACA TAACTGGCTT AACCCAAAGT 001920
001921 CTTTGATCTC CTGAACCA