Difference between revisions of "Lnc-IDS-4:1"
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sequence = <dnaseq>CAGTCATTCCATTAGTTTAATACTGAGTTGTTCAGAAACTTCTCAGTCAGTAACATGAAGATCCATTCCTGAAAAGCACTCAAACTGGACTTGAATTTTTAAAAAATGAAGAATAGAATTAGCATAAAATATTAAAGAACCTCATCATTAAAATTATATAACGAGACACTTACTTGTTTTCAAATGCAACTGTTATTGAATCTTCATGAACATCCTTTACAAATGCCTTGTAGAAAGCGCCATTGGAGCCCCGCACTTCCACCACCAGCTCCTCCATCTTCTCTTCAGCCCTGCTAGCGCCGGGAGCCCGCCCCCGAGAGGTGGGCTGCGGGCGCTCGAGGCCCAGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGCTGCCGCACGCCCCCTGGCAGCGGCGCCTCCGTCACCGCCGCCGCCCGCGCTCGCCGTCGGCCCGCCGCCCGCTCAGAGGCGGCCCTCCACCGGAAGTGAAACCGAAACGGAGCTGAGCGCCTGACTGAGGCCGAACCCCCGGCCCGCTGCGGGTGTAAACACTGAAACCACGTCACGTGATCAACGCTGTTCCCTCCCCCCGCGGGCTCAGCCCCTCGGCCCCGCCCTCTCTCTTCAAGTGGCCTGGGAGCGCGCGCATGCGCGCTGCTGGGAACCGGCCGGGGTGCCGGGTCGAAAGACAGACGCGCGGGCCGGGCGTGCGCGGGCTTGGTGGAGGGCGGGAAGGCTGAAGGGCGGTGACAGGTCGCACTGCCTCGCGAGGGCCAGAACGCCCATTTCTGCAGAGGCAGAAGGTGAGGCGTCTACGCCCTCTCTCACCAGATTTTGGGCGGCCCTGTGGAGACACCCTGTGCCCTTTAAGGGACATGGATTGAGTCGGGATCTCAAAATCTGCCTTAATCCATGTTCCCTTCGGGATGCTGGTATCCAACTGAGAAGTTGACGGAGCATCTATCGTGTGCCAGACACTGTGCTAAGTGCTAACGAGAAATCGGTGAGCAAAACAGAAAAGAAAAAAAAAGAAGAAACGACTGCCAGCATTGAACTTAGTACCTAGCAAAGTAGGTGGACATAAATCAAATTGTCAGACAAGTAAATGAGTAGTTGCAGCTGTGATAAGGGGTATGAAGAATAGGCGCTTCCATGATGGCGGAACATGACCTAGTCTGGGGTGGAGAAGGGGAGATGATTCCAGCTGGAATATGGCAGGTGAGAGTTAACTAATAGCACTGAGTTGGCAGAGGCAGGATGACCTGCCCCAGGCAGGTGCCCCAGAATGAGAGGATGTTGCTGCTGGTGGAACTCCAGCTTTAAAGCGGTGGATCTAGGGCCACATTCCTCAAGGCCATAGCAAACAGGAAAGACCTTTTGGACTAGGGTCTTTGGAGTAGTCACATGAGGCCAAGAACCCAATAGGGCTGAAAGAGAATCTCATCATAGGCTGAATGGGAGCAGAGCATTAGCTGCAACTCCAATGTATTATAGTAAAAGGGGACACATTGATTAGAATGATTATACCCCTCCAAGTGTAAGCTGTTGTTCAATTTACCCAGGGCTTAAAAATATGTCAACTCTTCACAACCATTTTTACTACAAGCCACACTCAACCTGTGTTGTTCCCTGAACCTGTGATGCACTTTCATCCGTTCATGTCTCTACACATCCTTCCTGGGCCCCATAGAGGCCCTGCACCTTAAGGTTTTCAGCTGGATTCCTATTAGCTAGTTATTTTATCTCAGGTACAGAGAGTTAACTTTGCTCCTCAATTTTCAGCACATTGTCATATCAGTCCCTACAGGGTCCTTGTTTACATTATTTTATAGTGTTTATATTATTTTTTCCTCATCTTTCTCGATCCCCACTCTCATTCTTCTAGACACAAGCTGCAATATGTTCGATAGAGATCCTTGATAATTTAACACAGATAATGTTTTGTTTATGCCTCTTGCATTTACAGAGATGGTATTGGACTGTAAATCTCTATTTCCCACTGTTTTACTCAACAGTCTGTTTTTGAGCTATACCCACATTGCTGTGTGTACACCTAGTTTGCTACCGAGTATGCCAGAAATTTTATTCATACATATCCCTACTGATCGGGCATCTAGGTTACTGCCAACTCCCTGAAGTCATACTGTGGTGAAAACCCTTGTGAATGTCTTTACAAACCTTTGCCAGAACTTATTTTGTGCTCTTGTAGAACTTTGTGCATACCCTCTGCTTCCTCATTACACTGCTTGGCATATAGCAGAGACTCAACAAATGTTGAATACCTCTACTATGATGGTTAGTGTACTAGAATAATTTATTTATATTTCTGTTTTCCTTATTGGATTATTAGTACCTTCCAGACAGGGCAAATGTCTTTTCTATCTTTGTGTCCCTGGCACATTAAAAGTGGTTGATTTCAAGGTATGTTCAATGAATGAATAAATACTTATCTTCACTGCCAGTAC</dnaseq>| | sequence = <dnaseq>CAGTCATTCCATTAGTTTAATACTGAGTTGTTCAGAAACTTCTCAGTCAGTAACATGAAGATCCATTCCTGAAAAGCACTCAAACTGGACTTGAATTTTTAAAAAATGAAGAATAGAATTAGCATAAAATATTAAAGAACCTCATCATTAAAATTATATAACGAGACACTTACTTGTTTTCAAATGCAACTGTTATTGAATCTTCATGAACATCCTTTACAAATGCCTTGTAGAAAGCGCCATTGGAGCCCCGCACTTCCACCACCAGCTCCTCCATCTTCTCTTCAGCCCTGCTAGCGCCGGGAGCCCGCCCCCGAGAGGTGGGCTGCGGGCGCTCGAGGCCCAGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGCTGCCGCACGCCCCCTGGCAGCGGCGCCTCCGTCACCGCCGCCGCCCGCGCTCGCCGTCGGCCCGCCGCCCGCTCAGAGGCGGCCCTCCACCGGAAGTGAAACCGAAACGGAGCTGAGCGCCTGACTGAGGCCGAACCCCCGGCCCGCTGCGGGTGTAAACACTGAAACCACGTCACGTGATCAACGCTGTTCCCTCCCCCCGCGGGCTCAGCCCCTCGGCCCCGCCCTCTCTCTTCAAGTGGCCTGGGAGCGCGCGCATGCGCGCTGCTGGGAACCGGCCGGGGTGCCGGGTCGAAAGACAGACGCGCGGGCCGGGCGTGCGCGGGCTTGGTGGAGGGCGGGAAGGCTGAAGGGCGGTGACAGGTCGCACTGCCTCGCGAGGGCCAGAACGCCCATTTCTGCAGAGGCAGAAGGTGAGGCGTCTACGCCCTCTCTCACCAGATTTTGGGCGGCCCTGTGGAGACACCCTGTGCCCTTTAAGGGACATGGATTGAGTCGGGATCTCAAAATCTGCCTTAATCCATGTTCCCTTCGGGATGCTGGTATCCAACTGAGAAGTTGACGGAGCATCTATCGTGTGCCAGACACTGTGCTAAGTGCTAACGAGAAATCGGTGAGCAAAACAGAAAAGAAAAAAAAAGAAGAAACGACTGCCAGCATTGAACTTAGTACCTAGCAAAGTAGGTGGACATAAATCAAATTGTCAGACAAGTAAATGAGTAGTTGCAGCTGTGATAAGGGGTATGAAGAATAGGCGCTTCCATGATGGCGGAACATGACCTAGTCTGGGGTGGAGAAGGGGAGATGATTCCAGCTGGAATATGGCAGGTGAGAGTTAACTAATAGCACTGAGTTGGCAGAGGCAGGATGACCTGCCCCAGGCAGGTGCCCCAGAATGAGAGGATGTTGCTGCTGGTGGAACTCCAGCTTTAAAGCGGTGGATCTAGGGCCACATTCCTCAAGGCCATAGCAAACAGGAAAGACCTTTTGGACTAGGGTCTTTGGAGTAGTCACATGAGGCCAAGAACCCAATAGGGCTGAAAGAGAATCTCATCATAGGCTGAATGGGAGCAGAGCATTAGCTGCAACTCCAATGTATTATAGTAAAAGGGGACACATTGATTAGAATGATTATACCCCTCCAAGTGTAAGCTGTTGTTCAATTTACCCAGGGCTTAAAAATATGTCAACTCTTCACAACCATTTTTACTACAAGCCACACTCAACCTGTGTTGTTCCCTGAACCTGTGATGCACTTTCATCCGTTCATGTCTCTACACATCCTTCCTGGGCCCCATAGAGGCCCTGCACCTTAAGGTTTTCAGCTGGATTCCTATTAGCTAGTTATTTTATCTCAGGTACAGAGAGTTAACTTTGCTCCTCAATTTTCAGCACATTGTCATATCAGTCCCTACAGGGTCCTTGTTTACATTATTTTATAGTGTTTATATTATTTTTTCCTCATCTTTCTCGATCCCCACTCTCATTCTTCTAGACACAAGCTGCAATATGTTCGATAGAGATCCTTGATAATTTAACACAGATAATGTTTTGTTTATGCCTCTTGCATTTACAGAGATGGTATTGGACTGTAAATCTCTATTTCCCACTGTTTTACTCAACAGTCTGTTTTTGAGCTATACCCACATTGCTGTGTGTACACCTAGTTTGCTACCGAGTATGCCAGAAATTTTATTCATACATATCCCTACTGATCGGGCATCTAGGTTACTGCCAACTCCCTGAAGTCATACTGTGGTGAAAACCCTTGTGAATGTCTTTACAAACCTTTGCCAGAACTTATTTTGTGCTCTTGTAGAACTTTGTGCATACCCTCTGCTTCCTCATTACACTGCTTGGCATATAGCAGAGACTCAACAAATGTTGAATACCTCTACTATGATGGTTAGTGTACTAGAATAATTTATTTATATTTCTGTTTTCCTTATTGGATTATTAGTACCTTCCAGACAGGGCAAATGTCTTTTCTATCTTTGTGTCCCTGGCACATTAAAAGTGGTTGATTTCAAGGTATGTTCAATGAATGAATAAATACTTATCTTCACTGCCAGTAC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-IDS-4]] | + | [[Category:Intergenic]][[Category:lnc-IDS-4]][[Category:NONHSAG055480]][[Category:Transcripts]] |
Latest revision as of 04:27, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-IDS-4:1 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT138911 |
| Classification |
intergenic |
| Length |
2484 nt |
| Genomic location |
chrX-:146990949..147003676 |
| Exon number |
4 |
| Exons |
146990949..146992513,146992799..146992902,146993160..146993748,147003451..147003676 |
| Genome context |
|
| Sequence |
000001 CAGTCATTCC ATTAGTTTAA TACTGAGTTG TTCAGAAACT TCTCAGTCAG TAACATGAAG ATCCATTCCT GAAAAGCACT 000080
000081 CAAACTGGAC TTGAATTTTT AAAAAATGAA GAATAGAATT AGCATAAAAT ATTAAAGAAC CTCATCATTA AAATTATATA 000160 000161 ACGAGACACT TACTTGTTTT CAAATGCAAC TGTTATTGAA TCTTCATGAA CATCCTTTAC AAATGCCTTG TAGAAAGCGC 000240 000241 CATTGGAGCC CCGCACTTCC ACCACCAGCT CCTCCATCTT CTCTTCAGCC CTGCTAGCGC CGGGAGCCCG CCCCCGAGAG 000320 000321 GTGGGCTGCG GGCGCTCGAG GCCCAGCCGC CGCCGCCGCC GCCGCCGCCG CCGCCTCCGC CGCCGCCGCC GCCGCCGCCG 000400 000401 CCGCCGCGCT GCCGCACGCC CCCTGGCAGC GGCGCCTCCG TCACCGCCGC CGCCCGCGCT CGCCGTCGGC CCGCCGCCCG 000480 000481 CTCAGAGGCG GCCCTCCACC GGAAGTGAAA CCGAAACGGA GCTGAGCGCC TGACTGAGGC CGAACCCCCG GCCCGCTGCG 000560 000561 GGTGTAAACA CTGAAACCAC GTCACGTGAT CAACGCTGTT CCCTCCCCCC GCGGGCTCAG CCCCTCGGCC CCGCCCTCTC 000640 000641 TCTTCAAGTG GCCTGGGAGC GCGCGCATGC GCGCTGCTGG GAACCGGCCG GGGTGCCGGG TCGAAAGACA GACGCGCGGG 000720 000721 CCGGGCGTGC GCGGGCTTGG TGGAGGGCGG GAAGGCTGAA GGGCGGTGAC AGGTCGCACT GCCTCGCGAG GGCCAGAACG 000800 000801 CCCATTTCTG CAGAGGCAGA AGGTGAGGCG TCTACGCCCT CTCTCACCAG ATTTTGGGCG GCCCTGTGGA GACACCCTGT 000880 000881 GCCCTTTAAG GGACATGGAT TGAGTCGGGA TCTCAAAATC TGCCTTAATC CATGTTCCCT TCGGGATGCT GGTATCCAAC 000960 000961 TGAGAAGTTG ACGGAGCATC TATCGTGTGC CAGACACTGT GCTAAGTGCT AACGAGAAAT CGGTGAGCAA AACAGAAAAG 001040 001041 AAAAAAAAAG AAGAAACGAC TGCCAGCATT GAACTTAGTA CCTAGCAAAG TAGGTGGACA TAAATCAAAT TGTCAGACAA 001120 001121 GTAAATGAGT AGTTGCAGCT GTGATAAGGG GTATGAAGAA TAGGCGCTTC CATGATGGCG GAACATGACC TAGTCTGGGG 001200 001201 TGGAGAAGGG GAGATGATTC CAGCTGGAAT ATGGCAGGTG AGAGTTAACT AATAGCACTG AGTTGGCAGA GGCAGGATGA 001280 001281 CCTGCCCCAG GCAGGTGCCC CAGAATGAGA GGATGTTGCT GCTGGTGGAA CTCCAGCTTT AAAGCGGTGG ATCTAGGGCC 001360 001361 ACATTCCTCA AGGCCATAGC AAACAGGAAA GACCTTTTGG ACTAGGGTCT TTGGAGTAGT CACATGAGGC CAAGAACCCA 001440 001441 ATAGGGCTGA AAGAGAATCT CATCATAGGC TGAATGGGAG CAGAGCATTA GCTGCAACTC CAATGTATTA TAGTAAAAGG 001520 001521 GGACACATTG ATTAGAATGA TTATACCCCT CCAAGTGTAA GCTGTTGTTC AATTTACCCA GGGCTTAAAA ATATGTCAAC 001600 001601 TCTTCACAAC CATTTTTACT ACAAGCCACA CTCAACCTGT GTTGTTCCCT GAACCTGTGA TGCACTTTCA TCCGTTCATG 001680 001681 TCTCTACACA TCCTTCCTGG GCCCCATAGA GGCCCTGCAC CTTAAGGTTT TCAGCTGGAT TCCTATTAGC TAGTTATTTT 001760 001761 ATCTCAGGTA CAGAGAGTTA ACTTTGCTCC TCAATTTTCA GCACATTGTC ATATCAGTCC CTACAGGGTC CTTGTTTACA 001840 001841 TTATTTTATA GTGTTTATAT TATTTTTTCC TCATCTTTCT CGATCCCCAC TCTCATTCTT CTAGACACAA GCTGCAATAT 001920 001921 GTTCGATAGA GATCCTTGAT AATTTAACAC AGATAATGTT TTGTTTATGC CTCTTGCATT TACAGAGATG GTATTGGACT 002000 002001 GTAAATCTCT ATTTCCCACT GTTTTACTCA ACAGTCTGTT TTTGAGCTAT ACCCACATTG CTGTGTGTAC ACCTAGTTTG 002080 002081 CTACCGAGTA TGCCAGAAAT TTTATTCATA CATATCCCTA CTGATCGGGC ATCTAGGTTA CTGCCAACTC CCTGAAGTCA 002160 002161 TACTGTGGTG AAAACCCTTG TGAATGTCTT TACAAACCTT TGCCAGAACT TATTTTGTGC TCTTGTAGAA CTTTGTGCAT 002240 002241 ACCCTCTGCT TCCTCATTAC ACTGCTTGGC ATATAGCAGA GACTCAACAA ATGTTGAATA CCTCTACTAT GATGGTTAGT 002320 002321 GTACTAGAAT AATTTATTTA TATTTCTGTT TTCCTTATTG GATTATTAGT ACCTTCCAGA CAGGGCAAAT GTCTTTTCTA 002400 002401 TCTTTGTGTC CCTGGCACAT TAAAAGTGGT TGATTTCAAG GTATGTTCAA TGAATGAATA AATACTTATC TTCACTGCCA 002480 002481 GTAC |
