Difference between revisions of "NONHSAT138380"
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sequence = <dnaseq>GGGAAGGAAGGCGCTGCCAGGAAAGGGGATCGCGAAGGGGAGCGGGAGCAGGAGCGAACTAGCGCGAGCGTCTGGGGCACTTTAGCCGCCCCTTTCCAGCCGCCCCCTCACGCGCGAGCTCCCCCGCCCCCCGGGCGGCTGCAGCGCTTCCCTCACCCCCACTCCCTGAGGTTTTTCTTCCCCCAGTCCCTCAGCTGCTGCTGCTGCTCAGGAGGTCAGATCTGCCACTGATGGTAATACCAGCACCACTCCGCCCACCTCTGCCAAGAAGAGAAAGTTAAAcagcagcagcagtagcagcagtaacagtagTAACGAGAGAGAAGACTTTGATTCCACCTCTTCCTCCTCTTCCACTCCTCCTTTACAACCCAGGGATTCGGCATCCCCTTCAACCTCGTCCTTCTGCCTGGGGGTTTCAGTGGCTGCTTCCAGCCACGTACCGATACAGAAGAAGCTGCGTTTTGAAGACACCCTGGAGTTTGTAGGGTTTGATGCGAAGATGGCTGAGGAAtcctcctcctcctcctcctcATCTTCACCAACTGCTGCAACATCTCAGCAGCAGCAACTTAAAAATAAGAGTATATTAATCTCTTCTGTGGCTTCGGTGCATCATGCAAACGGCCTAGCCAAATCTTCTACCACCGTCTCTAGCTTTGCTAACAGCAAACCTGGCTCTGCTAAGAAGTTAGTGATCAAGAACTTTAAAGATAAGCCTAAATTACCAGAAAACTACACAGATGAAACCTGGCAAAAACTGAAAGAAGCAGTGGAAGCTATTCAGAATAGTACTTCAATTAAGTACAATTTAGAAGAACTCTACCAGGTATGTA</dnaseq>| | sequence = <dnaseq>GGGAAGGAAGGCGCTGCCAGGAAAGGGGATCGCGAAGGGGAGCGGGAGCAGGAGCGAACTAGCGCGAGCGTCTGGGGCACTTTAGCCGCCCCTTTCCAGCCGCCCCCTCACGCGCGAGCTCCCCCGCCCCCCGGGCGGCTGCAGCGCTTCCCTCACCCCCACTCCCTGAGGTTTTTCTTCCCCCAGTCCCTCAGCTGCTGCTGCTGCTCAGGAGGTCAGATCTGCCACTGATGGTAATACCAGCACCACTCCGCCCACCTCTGCCAAGAAGAGAAAGTTAAAcagcagcagcagtagcagcagtaacagtagTAACGAGAGAGAAGACTTTGATTCCACCTCTTCCTCCTCTTCCACTCCTCCTTTACAACCCAGGGATTCGGCATCCCCTTCAACCTCGTCCTTCTGCCTGGGGGTTTCAGTGGCTGCTTCCAGCCACGTACCGATACAGAAGAAGCTGCGTTTTGAAGACACCCTGGAGTTTGTAGGGTTTGATGCGAAGATGGCTGAGGAAtcctcctcctcctcctcctcATCTTCACCAACTGCTGCAACATCTCAGCAGCAGCAACTTAAAAATAAGAGTATATTAATCTCTTCTGTGGCTTCGGTGCATCATGCAAACGGCCTAGCCAAATCTTCTACCACCGTCTCTAGCTTTGCTAACAGCAAACCTGGCTCTGCTAAGAAGTTAGTGATCAAGAACTTTAAAGATAAGCCTAAATTACCAGAAAACTACACAGATGAAACCTGGCAAAAACTGAAAGAAGCAGTGGAAGCTATTCAGAATAGTACTTCAATTAAGTACAATTTAGAAGAACTCTACCAGGTATGTA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG055217]] | + | [[Category:Sense]][[Category:NONHSAG055217]][[Category:Transcripts]] |
Latest revision as of 02:49, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT138380 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
836 nt |
Genomic location |
chrX-:119691772..119695157 |
Exon number |
3 |
Exons |
119691772..119691894,119693938..119694480,119694988..119695157 |
Genome context |
|
Sequence |
000001 GGGAAGGAAG GCGCTGCCAG GAAAGGGGAT CGCGAAGGGG AGCGGGAGCA GGAGCGAACT AGCGCGAGCG TCTGGGGCAC 000080
000081 TTTAGCCGCC CCTTTCCAGC CGCCCCCTCA CGCGCGAGCT CCCCCGCCCC CCGGGCGGCT GCAGCGCTTC CCTCACCCCC 000160 000161 ACTCCCTGAG GTTTTTCTTC CCCCAGTCCC TCAGCTGCTG CTGCTGCTCA GGAGGTCAGA TCTGCCACTG ATGGTAATAC 000240 000241 CAGCACCACT CCGCCCACCT CTGCCAAGAA GAGAAAGTTA AAcagcagca gcagtagcag cagtaacagt agTAACGAGA 000320 000321 GAGAAGACTT TGATTCCACC TCTTCCTCCT CTTCCACTCC TCCTTTACAA CCCAGGGATT CGGCATCCCC TTCAACCTCG 000400 000401 TCCTTCTGCC TGGGGGTTTC AGTGGCTGCT TCCAGCCACG TACCGATACA GAAGAAGCTG CGTTTTGAAG ACACCCTGGA 000480 000481 GTTTGTAGGG TTTGATGCGA AGATGGCTGA GGAAtcctcc tcctcctcct cctcATCTTC ACCAACTGCT GCAACATCTC 000560 000561 AGCAGCAGCA ACTTAAAAAT AAGAGTATAT TAATCTCTTC TGTGGCTTCG GTGCATCATG CAAACGGCCT AGCCAAATCT 000640 000641 TCTACCACCG TCTCTAGCTT TGCTAACAGC AAACCTGGCT CTGCTAAGAA GTTAGTGATC AAGAACTTTA AAGATAAGCC 000720 000721 TAAATTACCA GAAAACTACA CAGATGAAAC CTGGCAAAAA CTGAAAGAAG CAGTGGAAGC TATTCAGAAT AGTACTTCAA 000800 000801 TTAAGTACAA TTTAGAAGAA CTCTACCAGG TATGTA |
Predicted Small Protein
Name | NONHSAT138380_smProtein_494:592 |
Length | 33 |
Molecular weight | 3882.5483 |
Aromaticity | 0.0625 |
Instability index | 100.61875 |
Isoelectric point | 12.0084838867 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0331390213743 |
Amino acid sequence | MRRWLRNPPPPPPHLHQLLQHLSSSNLKIRVY |
Secondary structure | LLLLLLLLLLLLHHHHHHHHHHLLLLLLEEEL |
PRMN | - |
PiMo | - |