Difference between revisions of "NONHSAT022142"
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sequence = <dnaseq>GCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAAAGAAAATTGAGAGAAAGGACTACAGAGCCCCGAATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAATTTGAAGGCGATCTTTTAAAAAGAGATTAAACCGAAGGTGATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTGCGTCATTTAAAGCCTAGTTAACGCATTTACTAaacgcagacgaaaatggaaagattaattgggagtggtaggatgaaacaatttggagaagatagaagtttgaagtggaaaactggaagacagaagtacgggaaggcgaagaaaagaatagagaagatagggaaattagaagataaaaacatacttttagaagaaaaaagataaatttaaacctgaaaagtaggaagcagaagaaaaaagacaagctaggaaacaaaaagctaagggcaaaatgtacaaacttagaagaaaattggaagatagaaacaagatagaaaatgaaaatattgtcaagagtttcagatagaaaatgaaaaacaagctaagacaagtattggagaagtatagaagatagaaaaatataaagccaaaaattggataaaatagcactgaaaaaatgaggaaattattggtaaccaatttaTTTTAAAAGCCCATCAATTTAATTTCTGGTGGTGCAGAAGTTAGAAGGTAAAGCTTGAGAAGATGAGGGTGTTTACGTAGACCAGAACCAATTTAGAAGAATACTTGAAGCTAGAAGGGGAAGTTGGTTAAAAATCACATCAAAAAGCTACTAAAAGGACTGGTGTAATTTAAAAAAAACTAAGGCAGAAGGCTTTTGGAAGAGTTAGAAGAATTTGGAAGGCCTTAAATATAGTAGCTTAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTTTTGCATTGGACTTTGAGTTAAGATTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACACAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCAGCAGTTCGTGGTGAAGATAGGAAAAGAGTCCAGGAGCCAGTGCGATTTGGTGAAGGAAGCTAGGAAGAAGGAAGGAGCGCTAACGATTTGGTGGTGAAGCTAGGAAAAAGGATTCCAGGAAGGAGCGAGTGCAATTTGGTGATGAAGGTAGCAGGCGGCTTGGCTTGGCAACCACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAGGCCACAGGGAAAGCGAGTGGTTGGTAAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTTACTTATGGTAACCTTTTATTTATTTTCTAATATAATGGGGGAGTTTCGTACTGAGGTGTAAAGGGATTTATATGGGGACGTAGGCCGATTTCCGGGTGTTGTAGGTTTCTCTTTTTCAGGCTTATACTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAGAAATAGTAGATGGCAAGTTTGTGGGTTTTTTTTTTTTACACGAATTTGAGGAAAACCAAATGAATTTGATAGCCAAATTGAGACAATTTCAGCAAATCTGTAAGCAGTTTGTATGTTTAGTTGGGGTAATGAAGTATTTCAGTTTTGTGAATAGATGACCTGTTTTTACTTCCTCACCCTGAATTCGTTTTGTAAATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTTCAGTATTTTTTTTTGTGGGGGTGGGGGCAAAATATGTTTTCAGTTCTTTTTCCCTTAGGTCTGTCTAGAATCCTAAAGGCAAATGACTCAAGGTGTAACAGAAAACAAGAAAATCCAATATCAGGATAATCAGACCACCACAGGTTTACAGTTTATAGAAACTAGAGCAGTTCTCACGTTGAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTAGTTACTCTTTTTTCCCCCCACCCCCTTAATCAGACTTTAAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTGAAGCATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTACCGCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTATCCTTGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTCCAATAATGTGACTTCTTAAAAGTTTTATTAAAGGGGAGGGGCAAATATTGGCAATTAGTTGGCAGTGGCCTGTTACGGTTGGGATTGGTGGGGTGGGTTTAGGTAATTGTTTAGTTTATGATTGCAGATAAACTCATGCCAGAGAACTTAAAGTCTTAGAATGGAAAAAGTAAAGAAATATCAACTTCCAAGTTGATAACATCTTCTGAGTCATAACCAGCCTGGCAGTATGATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGAGAACATTATCTGCATATGCCAAAAAATTTTAAGCAAATGAAAGCTACCAATTTAAAGTTACGGAATCTACCATTTTAAAGTTAATTGCTTGTCAAGCTATAACCACAAAAATAATGAATTGATGAGAAATACAATGAAGAGGCAATGTCCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAAGCGAAAAGAAATGAAAATGTTACACTACATTAATCCTGGAATAAAAGAAGCCGAAATAAATGAGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTCAGACAGAAACTTTGTCTGCGAACACTCTTTAATGGACCAGATCAGGATTTGAGCGGAAGAACGAATGTAACTTTAAGGCAGGAAAGACAAATTTTATTCTTCATAAAGTGATGAGCATATAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAAATAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGGGGTCTATAAATTGACAGTGATTAGAGTAATACTTTTTCACATTTCCAAAGTTTGCATGTTAACTTTAAATGCTTACAATCTTAGAGTGGTAGGCAATGTTTTACACTATTGACCTTATATAGGGAAGGGAGGGGGTGCCTGTGGGGTTTTAAAGAATTTTCCTTTGCAGAGGCATTTCATCCTTCATGAAGCCATTCAGGATTTTGAATTGCATATGAGTGCTTGGCTCTTCCTTCTGTTCTAACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAAATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAATCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGTATTTGTGATTGAAGCTGAGTACATTTTGCTGGTGTATTTTTAGGTAAAATGCTTTTTGTTCATTTCTGGTGGTGGGAGGGGACTGAAGCCTTTAGTCTTTTCCAGATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAAATTAAACTGGCAAGTGGAAATGTTTAAACAGTTCAGTGATCTTTAGTGCATTGTTTATGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACACTCAGCAGACACACGTATGCGAAGGGCCAGAGAAGCCAGACCCAGTAAGAAAAAATAGCCTATTTACTTTAAATAAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCACCAGTGGACAAAATGAGGAAAACAGGTGAACAAGCTTTTTCTGTATTTACATACAAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTTCAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGTGTTGGCGTGGGGGTGGAGGGGTGAGGTGGGCGCTAAGCCTTTTTTTAAGATTTTTCAGGTACCCCTCACTAAAGGCACCGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCAGGAGAGACAACAAAGCGCTATTATCCTAAGGTCAAGAGAAGTGTCAGCCTCACCTGATTTTTATTAGTAATGAGGACTTGCCTCAACTCCCTCTTTCTGGAGTGAAGCATCCGAAGGAATGCTTGAAGTACCCCTGGGCTTCTCTTAACATTTAAGCAAGCTGTTTTTATAGCAGCTCTTAATAATAAAGCCCAAATCTCAAGCGGTGCTTGAAGGGGAGGGAAAGGGGGAAAGCGGGCAACCACTTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAAGCAAGGTCTCCCCACAAGCAACTTCTCTGCCACATCGCCACCCCGTGCCTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCGATGCAGCCAGTAGCTTGGATCCTTGTGGGCATGATCCATAATCGGTTTCAAGGTAATAGCCTGCAGCTGGTGTTTTG</dnaseq>| | sequence = <dnaseq>GCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAAAGAAAATTGAGAGAAAGGACTACAGAGCCCCGAATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAATTTGAAGGCGATCTTTTAAAAAGAGATTAAACCGAAGGTGATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTGCGTCATTTAAAGCCTAGTTAACGCATTTACTAaacgcagacgaaaatggaaagattaattgggagtggtaggatgaaacaatttggagaagatagaagtttgaagtggaaaactggaagacagaagtacgggaaggcgaagaaaagaatagagaagatagggaaattagaagataaaaacatacttttagaagaaaaaagataaatttaaacctgaaaagtaggaagcagaagaaaaaagacaagctaggaaacaaaaagctaagggcaaaatgtacaaacttagaagaaaattggaagatagaaacaagatagaaaatgaaaatattgtcaagagtttcagatagaaaatgaaaaacaagctaagacaagtattggagaagtatagaagatagaaaaatataaagccaaaaattggataaaatagcactgaaaaaatgaggaaattattggtaaccaatttaTTTTAAAAGCCCATCAATTTAATTTCTGGTGGTGCAGAAGTTAGAAGGTAAAGCTTGAGAAGATGAGGGTGTTTACGTAGACCAGAACCAATTTAGAAGAATACTTGAAGCTAGAAGGGGAAGTTGGTTAAAAATCACATCAAAAAGCTACTAAAAGGACTGGTGTAATTTAAAAAAAACTAAGGCAGAAGGCTTTTGGAAGAGTTAGAAGAATTTGGAAGGCCTTAAATATAGTAGCTTAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTTTTGCATTGGACTTTGAGTTAAGATTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACACAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCAGCAGTTCGTGGTGAAGATAGGAAAAGAGTCCAGGAGCCAGTGCGATTTGGTGAAGGAAGCTAGGAAGAAGGAAGGAGCGCTAACGATTTGGTGGTGAAGCTAGGAAAAAGGATTCCAGGAAGGAGCGAGTGCAATTTGGTGATGAAGGTAGCAGGCGGCTTGGCTTGGCAACCACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAGGCCACAGGGAAAGCGAGTGGTTGGTAAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTTACTTATGGTAACCTTTTATTTATTTTCTAATATAATGGGGGAGTTTCGTACTGAGGTGTAAAGGGATTTATATGGGGACGTAGGCCGATTTCCGGGTGTTGTAGGTTTCTCTTTTTCAGGCTTATACTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAGAAATAGTAGATGGCAAGTTTGTGGGTTTTTTTTTTTTACACGAATTTGAGGAAAACCAAATGAATTTGATAGCCAAATTGAGACAATTTCAGCAAATCTGTAAGCAGTTTGTATGTTTAGTTGGGGTAATGAAGTATTTCAGTTTTGTGAATAGATGACCTGTTTTTACTTCCTCACCCTGAATTCGTTTTGTAAATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTTCAGTATTTTTTTTTGTGGGGGTGGGGGCAAAATATGTTTTCAGTTCTTTTTCCCTTAGGTCTGTCTAGAATCCTAAAGGCAAATGACTCAAGGTGTAACAGAAAACAAGAAAATCCAATATCAGGATAATCAGACCACCACAGGTTTACAGTTTATAGAAACTAGAGCAGTTCTCACGTTGAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTAGTTACTCTTTTTTCCCCCCACCCCCTTAATCAGACTTTAAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTGAAGCATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTACCGCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTATCCTTGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTCCAATAATGTGACTTCTTAAAAGTTTTATTAAAGGGGAGGGGCAAATATTGGCAATTAGTTGGCAGTGGCCTGTTACGGTTGGGATTGGTGGGGTGGGTTTAGGTAATTGTTTAGTTTATGATTGCAGATAAACTCATGCCAGAGAACTTAAAGTCTTAGAATGGAAAAAGTAAAGAAATATCAACTTCCAAGTTGATAACATCTTCTGAGTCATAACCAGCCTGGCAGTATGATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGAGAACATTATCTGCATATGCCAAAAAATTTTAAGCAAATGAAAGCTACCAATTTAAAGTTACGGAATCTACCATTTTAAAGTTAATTGCTTGTCAAGCTATAACCACAAAAATAATGAATTGATGAGAAATACAATGAAGAGGCAATGTCCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAAGCGAAAAGAAATGAAAATGTTACACTACATTAATCCTGGAATAAAAGAAGCCGAAATAAATGAGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTCAGACAGAAACTTTGTCTGCGAACACTCTTTAATGGACCAGATCAGGATTTGAGCGGAAGAACGAATGTAACTTTAAGGCAGGAAAGACAAATTTTATTCTTCATAAAGTGATGAGCATATAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAAATAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGGGGTCTATAAATTGACAGTGATTAGAGTAATACTTTTTCACATTTCCAAAGTTTGCATGTTAACTTTAAATGCTTACAATCTTAGAGTGGTAGGCAATGTTTTACACTATTGACCTTATATAGGGAAGGGAGGGGGTGCCTGTGGGGTTTTAAAGAATTTTCCTTTGCAGAGGCATTTCATCCTTCATGAAGCCATTCAGGATTTTGAATTGCATATGAGTGCTTGGCTCTTCCTTCTGTTCTAACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAAATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAATCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGTATTTGTGATTGAAGCTGAGTACATTTTGCTGGTGTATTTTTAGGTAAAATGCTTTTTGTTCATTTCTGGTGGTGGGAGGGGACTGAAGCCTTTAGTCTTTTCCAGATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAAATTAAACTGGCAAGTGGAAATGTTTAAACAGTTCAGTGATCTTTAGTGCATTGTTTATGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACACTCAGCAGACACACGTATGCGAAGGGCCAGAGAAGCCAGACCCAGTAAGAAAAAATAGCCTATTTACTTTAAATAAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCACCAGTGGACAAAATGAGGAAAACAGGTGAACAAGCTTTTTCTGTATTTACATACAAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTTCAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGTGTTGGCGTGGGGGTGGAGGGGTGAGGTGGGCGCTAAGCCTTTTTTTAAGATTTTTCAGGTACCCCTCACTAAAGGCACCGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCAGGAGAGACAACAAAGCGCTATTATCCTAAGGTCAAGAGAAGTGTCAGCCTCACCTGATTTTTATTAGTAATGAGGACTTGCCTCAACTCCCTCTTTCTGGAGTGAAGCATCCGAAGGAATGCTTGAAGTACCCCTGGGCTTCTCTTAACATTTAAGCAAGCTGTTTTTATAGCAGCTCTTAATAATAAAGCCCAAATCTCAAGCGGTGCTTGAAGGGGAGGGAAAGGGGGAAAGCGGGCAACCACTTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAAGCAAGGTCTCCCCACAAGCAACTTCTCTGCCACATCGCCACCCCGTGCCTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCGATGCAGCCAGTAGCTTGGATCCTTGTGGGCATGATCCATAATCGGTTTCAAGGTAATAGCCTGCAGCTGGTGTTTTG</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:NONHSAG008675]] | + | [[Category:Intergenic]][[Category:NONHSAG008675]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 20:36, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT022142 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
5259 nt |
Genomic location |
chr11+:65266529..65273881 |
Exon number |
5 |
Exons |
65266529..65269474,65270119..65270591,65271200..65271677,65271797..65273133,65273857..65273881 |
Genome context |
|
Sequence |
000001 GCCAGCGCAG GGGCTTCTGC TGAGGGGGCA GGCGGAGCTT GAGGAAACCG CAGATAAGTT TTTTTCTCTT TGAAAGATAG 000080
000081 AGATTAATAC AACTACTTAA AAAATATAGT CAATAGGTTA CTAAGATATT GCTTAGCGTT AAGTTTTTAA CGTAATTTTA 000160 000161 ATAGCTTAAG ATTTTAAGAG AAAATATGAA GACTTAGAAG AGTAGCATGA GGAAGGAAAA GATAAAAGGT TTCTAAAACA 000240 000241 TGACGGAGGT TGAGATGAAG CTTCTTCATG GAGTAAAAAA TGTATTTAAA AGAAAATTGA GAGAAAGGAC TACAGAGCCC 000320 000321 CGAATTAATA CCAATAGAAG GGCAATGCTT TTAGATTAAA ATGAAGGTGA CTTAAACAGC TTAAAGTTTA GTTTAAAAGT 000400 000401 TGTAGGTGAT TAAAATAATT TGAAGGCGAT CTTTTAAAAA GAGATTAAAC CGAAGGTGAT TAAAAGACCT TGAAATCCAT 000480 000481 GACGCAGGGA GAATTGCGTC ATTTAAAGCC TAGTTAACGC ATTTACTAaa cgcagacgaa aatggaaaga ttaattggga 000560 000561 gtggtaggat gaaacaattt ggagaagata gaagtttgaa gtggaaaact ggaagacaga agtacgggaa ggcgaagaaa 000640 000641 agaatagaga agatagggaa attagaagat aaaaacatac ttttagaaga aaaaagataa atttaaacct gaaaagtagg 000720 000721 aagcagaaga aaaaagacaa gctaggaaac aaaaagctaa gggcaaaatg tacaaactta gaagaaaatt ggaagataga 000800 000801 aacaagatag aaaatgaaaa tattgtcaag agtttcagat agaaaatgaa aaacaagcta agacaagtat tggagaagta 000880 000881 tagaagatag aaaaatataa agccaaaaat tggataaaat agcactgaaa aaatgaggaa attattggta accaatttaT 000960 000961 TTTAAAAGCC CATCAATTTA ATTTCTGGTG GTGCAGAAGT TAGAAGGTAA AGCTTGAGAA GATGAGGGTG TTTACGTAGA 001040 001041 CCAGAACCAA TTTAGAAGAA TACTTGAAGC TAGAAGGGGA AGTTGGTTAA AAATCACATC AAAAAGCTAC TAAAAGGACT 001120 001121 GGTGTAATTT AAAAAAAACT AAGGCAGAAG GCTTTTGGAA GAGTTAGAAG AATTTGGAAG GCCTTAAATA TAGTAGCTTA 001200 001201 GTTTGAAAAA TGTGAAGGAC TTTCGTAACG GAAGTAATTC AAGATCAAGA GTAATTACCA ACTTAATGTT TTTGCATTGG 001280 001281 ACTTTGAGTT AAGATTATTT TTTAAATCCT GAGGACTAGC ATTAATTGAC AGCTGACCCA GGTGCTACAC AGAAGTGGAT 001360 001361 TCAGTGAATC TAGGAAGACA GCAGCAGACA GGATTCCAGG AACCAGTGTT TGATGAAGCT AGGACTGAGG AGCAAGCGAG 001440 001441 CAAGCAGCAG TTCGTGGTGA AGATAGGAAA AGAGTCCAGG AGCCAGTGCG ATTTGGTGAA GGAAGCTAGG AAGAAGGAAG 001520 001521 GAGCGCTAAC GATTTGGTGG TGAAGCTAGG AAAAAGGATT CCAGGAAGGA GCGAGTGCAA TTTGGTGATG AAGGTAGCAG 001600 001601 GCGGCTTGGC TTGGCAACCA CACGGAGGAG GCGAGCAGGC GTTGTGCGTA GAGGATCCTA GACCAGCATG CCAGTGTGCC 001680 001681 AAGGCCACAG GGAAAGCGAG TGGTTGGTAA AAATCCGTGA GGTCGGCAAT ATGTTGTTTT TCTGGAACTT ACTTATGGTA 001760 001761 ACCTTTTATT TATTTTCTAA TATAATGGGG GAGTTTCGTA CTGAGGTGTA AAGGGATTTA TATGGGGACG TAGGCCGATT 001840 001841 TCCGGGTGTT GTAGGTTTCT CTTTTTCAGG CTTATACTCA TGAATCTTGT CTGAAGCTTT TGAGGGCAGA CTGCCAAGTC 001920 001921 CTGGAGAAAT AGTAGATGGC AAGTTTGTGG GTTTTTTTTT TTTACACGAA TTTGAGGAAA ACCAAATGAA TTTGATAGCC 002000 002001 AAATTGAGAC AATTTCAGCA AATCTGTAAG CAGTTTGTAT GTTTAGTTGG GGTAATGAAG TATTTCAGTT TTGTGAATAG 002080 002081 ATGACCTGTT TTTACTTCCT CACCCTGAAT TCGTTTTGTA AATGTAGAGT TTGGATGTGT AACTGAGGCG GGGGGGAGTT 002160 002161 TTCAGTATTT TTTTTTGTGG GGGTGGGGGC AAAATATGTT TTCAGTTCTT TTTCCCTTAG GTCTGTCTAG AATCCTAAAG 002240 002241 GCAAATGACT CAAGGTGTAA CAGAAAACAA GAAAATCCAA TATCAGGATA ATCAGACCAC CACAGGTTTA CAGTTTATAG 002320 002321 AAACTAGAGC AGTTCTCACG TTGAGGTCTG TGGAAGAGAT GTCCATTGGA GAAATGGCTG GTAGTTACTC TTTTTTCCCC 002400 002401 CCACCCCCTT AATCAGACTT TAAAAGTGCT TAACCCCTTA AACTTGTTAT TTTTTACTTG AAGCATTTTG GGATGGTCTT 002480 002481 AACAGGGAAG AGAGAGGGTG GGGGAGAAAA TGTTTTTTTC TAAGATTTTC CACAGATGCT ATAGTACTAT TGACAAACTG 002560 002561 GGTTAGAGAA GGAGTGTACC GCTGTGCTGT TGGCACGAAC ACCTTCAGGG ACTGGAGCTG CTTTTATCCT TGGAAGAGTA 002640 002641 TTCCCAGTTG AAGCTGAAAA GTACAGCACA GTGCAGCTTT GGTTCATATT CAGTCATCTC AGGAGAACTT CAGAAGAGCT 002720 002721 TGAGTAGGCC AAATGTTGAA GTTAAGTTTT CCAATAATGT GACTTCTTAA AAGTTTTATT AAAGGGGAGG GGCAAATATT 002800 002801 GGCAATTAGT TGGCAGTGGC CTGTTACGGT TGGGATTGGT GGGGTGGGTT TAGGTAATTG TTTAGTTTAT GATTGCAGAT 002880 002881 AAACTCATGC CAGAGAACTT AAAGTCTTAG AATGGAAAAA GTAAAGAAAT ATCAACTTCC AAGTTGATAA CATCTTCTGA 002960 002961 GTCATAACCA GCCTGGCAGT ATGATGGCCT AGATGCAGAG AAAACAGCTC CTTGGTGAAT TGATAAGTAA AGGCAGAAAA 003040 003041 GATTATATGT CATACCTCCA TTGGGGAATA AGCATAACCC TGAGATTCTT ACTACTGATG AGAACATTAT CTGCATATGC 003120 003121 CAAAAAATTT TAAGCAAATG AAAGCTACCA ATTTAAAGTT ACGGAATCTA CCATTTTAAA GTTAATTGCT TGTCAAGCTA 003200 003201 TAACCACAAA AATAATGAAT TGATGAGAAA TACAATGAAG AGGCAATGTC CATCTCAAAA TACTGCTTTT ACAAAAGCAG 003280 003281 AATAAAAGCG AAAAGAAATG AAAATGTTAC ACTACATTAA TCCTGGAATA AAAGAAGCCG AAATAAATGA GAGATGAGTT 003360 003361 GGGATCAAGT GGATTGAGGA GGCTGTGCTG TGTGCCAATG TTTCGTTTGC CTCAGACAGA AACTTTGTCT GCGAACACTC 003440 003441 TTTAATGGAC CAGATCAGGA TTTGAGCGGA AGAACGAATG TAACTTTAAG GCAGGAAAGA CAAATTTTAT TCTTCATAAA 003520 003521 GTGATGAGCA TATAATAATT CCAGGCACAT GGCAATAGAG GCCCTCTAAA TAAGGAATAA ATAACCTCTT AGACAGGTGG 003600 003601 GAGATTATGA TCAGAGTAAA AGGTAATTAC ACATTTTATT TCCAGAAAGT CAGGGGTCTA TAAATTGACA GTGATTAGAG 003680 003681 TAATACTTTT TCACATTTCC AAAGTTTGCA TGTTAACTTT AAATGCTTAC AATCTTAGAG TGGTAGGCAA TGTTTTACAC 003760 003761 TATTGACCTT ATATAGGGAA GGGAGGGGGT GCCTGTGGGG TTTTAAAGAA TTTTCCTTTG CAGAGGCATT TCATCCTTCA 003840 003841 TGAAGCCATT CAGGATTTTG AATTGCATAT GAGTGCTTGG CTCTTCCTTC TGTTCTAACT TCACAGAGAA TGCAGTTGTC 003920 003921 TTGACTTCAG GTCTGTCTGT TCTGTTGGCA AGTAAATGCA GTACTGTTCT GATCCCGCTG CTATTAGAAT GCATTGTGAA 004000 004001 ACGACTGGAG TATGATTAAA AGTTGTGTTC CCCAATGCTT GGAGTAGTGA TTGTTGAAGG AAAAAATCCA GCTGAGTGAT 004080 004081 AAAGGCTGAG TGTTGAGGAA ATTTCTGCAG TTTTAAGCAG TCGTATTTGT GATTGAAGCT GAGTACATTT TGCTGGTGTA 004160 004161 TTTTTAGGTA AAATGCTTTT TGTTCATTTC TGGTGGTGGG AGGGGACTGA AGCCTTTAGT CTTTTCCAGA TGCAACCTTA 004240 004241 AAATCAGTGA CAAGAAACAT TCCAAACAAG CAACAGTCTT CAAGAAATTA AACTGGCAAG TGGAAATGTT TAAACAGTTC 004320 004321 AGTGATCTTT AGTGCATTGT TTATGTGTGG GTTTCTCTCT CCCCTCCCTT GGTCTTAATT CTTACATGCA GGAACACTCA 004400 004401 GCAGACACAC GTATGCGAAG GGCCAGAGAA GCCAGACCCA GTAAGAAAAA ATAGCCTATT TACTTTAAAT AAACCAAACA 004480 004481 TTCCATTTTA AATGTGGGGA TTGGGAACCA CTAGTTCTTT CAGATGGTAT TCTTCAGACT ATAGAAGGAG CTTCCAGTTG 004560 004561 AATTCACCAG TGGACAAAAT GAGGAAAACA GGTGAACAAG CTTTTTCTGT ATTTACATAC AAAGTCAGAT CAGTTATGGG 004640 004641 ACAATAGTAT TGAATAGATT TCAGCTTTAT GCTGGAGTAA CTGGCATGTG AGCAAACTGT GTTGGCGTGG GGGTGGAGGG 004720 004721 GTGAGGTGGG CGCTAAGCCT TTTTTTAAGA TTTTTCAGGT ACCCCTCACT AAAGGCACCG AAGGCTTAAA GTAGGACAAC 004800 004801 CATGGAGCCT TCCTGTGGCA GGAGAGACAA CAAAGCGCTA TTATCCTAAG GTCAAGAGAA GTGTCAGCCT CACCTGATTT 004880 004881 TTATTAGTAA TGAGGACTTG CCTCAACTCC CTCTTTCTGG AGTGAAGCAT CCGAAGGAAT GCTTGAAGTA CCCCTGGGCT 004960 004961 TCTCTTAACA TTTAAGCAAG CTGTTTTTAT AGCAGCTCTT AATAATAAAG CCCAAATCTC AAGCGGTGCT TGAAGGGGAG 005040 005041 GGAAAGGGGG AAAGCGGGCA ACCACTTTTC CCTAGCTTTT CCAGAAGCCT GTTAAAAGCA AGGTCTCCCC ACAAGCAACT 005120 005121 TCTCTGCCAC ATCGCCACCC CGTGCCTTTT GATCTAGCAC AGACCCTTCA CCCCTCACCT CGATGCAGCC AGTAGCTTGG 005200 005201 ATCCTTGTGG GCATGATCCA TAATCGGTTT CAAGGTAATA GCCTGCAGCT GGTGTTTTG |
Predicted Small Protein
Name | NONHSAT022142_smProtein_1667:1810 |
Length | 48 |
Molecular weight | 5699.6696 |
Aromaticity | 0.170212765957 |
Instability index | 45.444893617 |
Isoelectric point | 5.60491943359 |
Runs | 4 |
Runs residual | 0.081170212766 |
Runs probability | 0.0421082847552 |
Amino acid sequence | MPVCQGHRESEWLVKIREVGNMLFFWNLLMVTFYLFSNIMGEFRTEV |
Secondary structure | LLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooo |