Difference between revisions of "Lnc-FOXD4L6-1:1"

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sequence = <dnaseq>TTAGGTGCTGTTGTAGGAGCAAGGGATACAATGATGATCAAGGCAGATGCAGCCGTTACCTTCAGGTTGTGGAGTCCGGATACAGACTGGAGGCAGGCAGCTGTAAGATGTGTGAGAAATGCTGCGCTGGATCAGCCCATGGTATTAGGAGAGCAGGCTTCGGTAGATTGCAAATGACCTGCTTTCTTTCGGATCCCGGGCTGCTTTCGGACACCTGTCGAATAGTAAATCCCAAGTAAGGTACCTGCGGTCGTCGGCAGATCTGAATTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGAGACCGAGAGGTTGATGTCACTCCCAATATCGGAGGAAGTATACACCCCCGTGTGAGATGGTCCTTAATAATATTCCACGGCGGAGGGGGTGATATGACTACATACATGGCAGAAAGTGGAAACCTCCCAGGGATATTGTTCCCACGATCCTGGAGGGAAGAAGATGATGTTACTTTCAATATGACAGAAGGTGGATGAAGTGGTGGACTGCCCCTCCACACCTGTGGACACGCCCCCACTGATATTCCTTCTAATTGCAGCGTGGGAGAGGAGGATATGACACGCGATATCGCAGGGAGTAGAAACACCCCTGTGATACTGTTCTTAATATTCAGGGAGGAAGAGGATGATATTACTCCCAATACAGACGGGTGTACACCCTCTGTACACCGAGGGTGTACACCTGTCTGTGAAAGAGTTCGTAATCTCCAGAGGGGGAGATGATATTACTCACAATATGGTAAAGAGGCTGTGAGTCCACGGAGGATCCTCAGAGCCAGCGGGGGAAGAGGGGCTGGCTCTCAGTCCCCGCCTCGCGGGGGTGACTCCCCCCAGTGCGATGGGGGTCCTAAGAGCCAGTGGGGGAAGAGGGGCTGGCTCTGAGACCCCGCCTCGCGGGGGGTGCCTCCCCGCCCTGTGATGGGGGTCCGAAGAGCCAGAAGGCTTAGAGGGGCTGGCTCTCAGTCCCCGCCTCGCGGGGGGTGCCTCCTCCCCCTGCGATGGGGGTCGTAAGAGCCACTGGGGGAATAGGGGCTTGCTCTCAGTCACCGCCTCGCGGGGGGTGCCTCCTTTCCTTTCTACATAGACACAGTGACAGTCTGATCTCTCTTTCTTTTCCCTACAGATGGACACGCCCCCACTGATATTGTTTTTAATGCAGCGTGGGAGGGGAGGATATGACACGCGATATCGCAGCTGAGTGCCACGTGCTGACGTCACTAAGATCAATACAGCAAACTCTGAAAGATGGACAGAGAGACAGGAGATGGTCCTTTATAATGCAGTGTGATCTGTGCTGCAATAGAGTTTTGGAAGCTAGAAGTTCAAAACGAGGTGTTGGCAGCACCATGCTCTCTCTGAAGATGCTAGGAAGAATCTGCTCCATGCCTTTCCATTCGCTTCTGGGGTTTCCTGCAAGCCCTGACATTCCTTGGCTTGTAGATGCATCACCCCAGTTTCCGCCCCCATCATCACATGGCCTCCTCTCTGTGTGTGCCTCTGCGTTCCCTCTATTCTTCTTCTAAGGACACCGACACCAGTCATAGTGGATTAAGTGTCCACTCCTAACCAATTACATCTGCAACAACCCTATTTCCAAATAAAGTCACATTCTAAG</dnaseq>|
 
sequence = <dnaseq>TTAGGTGCTGTTGTAGGAGCAAGGGATACAATGATGATCAAGGCAGATGCAGCCGTTACCTTCAGGTTGTGGAGTCCGGATACAGACTGGAGGCAGGCAGCTGTAAGATGTGTGAGAAATGCTGCGCTGGATCAGCCCATGGTATTAGGAGAGCAGGCTTCGGTAGATTGCAAATGACCTGCTTTCTTTCGGATCCCGGGCTGCTTTCGGACACCTGTCGAATAGTAAATCCCAAGTAAGGTACCTGCGGTCGTCGGCAGATCTGAATTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGAGACCGAGAGGTTGATGTCACTCCCAATATCGGAGGAAGTATACACCCCCGTGTGAGATGGTCCTTAATAATATTCCACGGCGGAGGGGGTGATATGACTACATACATGGCAGAAAGTGGAAACCTCCCAGGGATATTGTTCCCACGATCCTGGAGGGAAGAAGATGATGTTACTTTCAATATGACAGAAGGTGGATGAAGTGGTGGACTGCCCCTCCACACCTGTGGACACGCCCCCACTGATATTCCTTCTAATTGCAGCGTGGGAGAGGAGGATATGACACGCGATATCGCAGGGAGTAGAAACACCCCTGTGATACTGTTCTTAATATTCAGGGAGGAAGAGGATGATATTACTCCCAATACAGACGGGTGTACACCCTCTGTACACCGAGGGTGTACACCTGTCTGTGAAAGAGTTCGTAATCTCCAGAGGGGGAGATGATATTACTCACAATATGGTAAAGAGGCTGTGAGTCCACGGAGGATCCTCAGAGCCAGCGGGGGAAGAGGGGCTGGCTCTCAGTCCCCGCCTCGCGGGGGTGACTCCCCCCAGTGCGATGGGGGTCCTAAGAGCCAGTGGGGGAAGAGGGGCTGGCTCTGAGACCCCGCCTCGCGGGGGGTGCCTCCCCGCCCTGTGATGGGGGTCCGAAGAGCCAGAAGGCTTAGAGGGGCTGGCTCTCAGTCCCCGCCTCGCGGGGGGTGCCTCCTCCCCCTGCGATGGGGGTCGTAAGAGCCACTGGGGGAATAGGGGCTTGCTCTCAGTCACCGCCTCGCGGGGGGTGCCTCCTTTCCTTTCTACATAGACACAGTGACAGTCTGATCTCTCTTTCTTTTCCCTACAGATGGACACGCCCCCACTGATATTGTTTTTAATGCAGCGTGGGAGGGGAGGATATGACACGCGATATCGCAGCTGAGTGCCACGTGCTGACGTCACTAAGATCAATACAGCAAACTCTGAAAGATGGACAGAGAGACAGGAGATGGTCCTTTATAATGCAGTGTGATCTGTGCTGCAATAGAGTTTTGGAAGCTAGAAGTTCAAAACGAGGTGTTGGCAGCACCATGCTCTCTCTGAAGATGCTAGGAAGAATCTGCTCCATGCCTTTCCATTCGCTTCTGGGGTTTCCTGCAAGCCCTGACATTCCTTGGCTTGTAGATGCATCACCCCAGTTTCCGCCCCCATCATCACATGGCCTCCTCTCTGTGTGTGCCTCTGCGTTCCCTCTATTCTTCTTCTAAGGACACCGACACCAGTCATAGTGGATTAAGTGTCCACTCCTAACCAATTACATCTGCAACAACCCTATTTCCAAATAAAGTCACATTCTAAG</dnaseq>|
 
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}}
[[Category:Intergenic]][[Category:lnc-FOXD4L6-1]]
+
[[Category:Intergenic]][[Category:lnc-FOXD4L6-1]][[Category:NONHSAG052461]][[Category:Transcripts]]

Latest revision as of 04:16, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-FOXD4L6-1:1

Source

LNCipedia2.1

Same with

NONHSAT131652

Classification

intergenic

Length

1641 nt

Genomic location

chr9-:69174214..69192879

Exon number

6

Exons

69174214..69174523,69175960..69176070,69177697..69178388,69179394..69179617,69180823..69180970,69192724..69192879

Genome context

Sequence
000001 TTAGGTGCTG TTGTAGGAGC AAGGGATACA ATGATGATCA AGGCAGATGC AGCCGTTACC TTCAGGTTGT GGAGTCCGGA 000080
000081 TACAGACTGG AGGCAGGCAG CTGTAAGATG TGTGAGAAAT GCTGCGCTGG ATCAGCCCAT GGTATTAGGA GAGCAGGCTT 000160
000161 CGGTAGATTG CAAATGACCT GCTTTCTTTC GGATCCCGGG CTGCTTTCGG ACACCTGTCG AATAGTAAAT CCCAAGTAAG 000240
000241 GTACCTGCGG TCGTCGGCAG ATCTGAATTT TCTTCTTGGA CACCTAATAC CCACAGTCCT CCAGAGACCG AGAGGTTGAT 000320
000321 GTCACTCCCA ATATCGGAGG AAGTATACAC CCCCGTGTGA GATGGTCCTT AATAATATTC CACGGCGGAG GGGGTGATAT 000400
000401 GACTACATAC ATGGCAGAAA GTGGAAACCT CCCAGGGATA TTGTTCCCAC GATCCTGGAG GGAAGAAGAT GATGTTACTT 000480
000481 TCAATATGAC AGAAGGTGGA TGAAGTGGTG GACTGCCCCT CCACACCTGT GGACACGCCC CCACTGATAT TCCTTCTAAT 000560
000561 TGCAGCGTGG GAGAGGAGGA TATGACACGC GATATCGCAG GGAGTAGAAA CACCCCTGTG ATACTGTTCT TAATATTCAG 000640
000641 GGAGGAAGAG GATGATATTA CTCCCAATAC AGACGGGTGT ACACCCTCTG TACACCGAGG GTGTACACCT GTCTGTGAAA 000720
000721 GAGTTCGTAA TCTCCAGAGG GGGAGATGAT ATTACTCACA ATATGGTAAA GAGGCTGTGA GTCCACGGAG GATCCTCAGA 000800
000801 GCCAGCGGGG GAAGAGGGGC TGGCTCTCAG TCCCCGCCTC GCGGGGGTGA CTCCCCCCAG TGCGATGGGG GTCCTAAGAG 000880
000881 CCAGTGGGGG AAGAGGGGCT GGCTCTGAGA CCCCGCCTCG CGGGGGGTGC CTCCCCGCCC TGTGATGGGG GTCCGAAGAG 000960
000961 CCAGAAGGCT TAGAGGGGCT GGCTCTCAGT CCCCGCCTCG CGGGGGGTGC CTCCTCCCCC TGCGATGGGG GTCGTAAGAG 001040
001041 CCACTGGGGG AATAGGGGCT TGCTCTCAGT CACCGCCTCG CGGGGGGTGC CTCCTTTCCT TTCTACATAG ACACAGTGAC 001120
001121 AGTCTGATCT CTCTTTCTTT TCCCTACAGA TGGACACGCC CCCACTGATA TTGTTTTTAA TGCAGCGTGG GAGGGGAGGA 001200
001201 TATGACACGC GATATCGCAG CTGAGTGCCA CGTGCTGACG TCACTAAGAT CAATACAGCA AACTCTGAAA GATGGACAGA 001280
001281 GAGACAGGAG ATGGTCCTTT ATAATGCAGT GTGATCTGTG CTGCAATAGA GTTTTGGAAG CTAGAAGTTC AAAACGAGGT 001360
001361 GTTGGCAGCA CCATGCTCTC TCTGAAGATG CTAGGAAGAA TCTGCTCCAT GCCTTTCCAT TCGCTTCTGG GGTTTCCTGC 001440
001441 AAGCCCTGAC ATTCCTTGGC TTGTAGATGC ATCACCCCAG TTTCCGCCCC CATCATCACA TGGCCTCCTC TCTGTGTGTG 001520
001521 CCTCTGCGTT CCCTCTATTC TTCTTCTAAG GACACCGACA CCAGTCATAG TGGATTAAGT GTCCACTCCT AACCAATTAC 001600
001601 ATCTGCAACA ACCCTATTTC CAAATAAAGT CACATTCTAA G
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