Difference between revisions of "ENST00000508671.1"

Latest revision as of 16:41, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000508671.1
Source	Gencode19
Same with	lnc-CLLU1.1-1:1,NONHSAT029888
Classification	intergenic
Length	1968 nt
Genomic location	chr12+:92815307..92877456
Exon number	2
Exons	92815307..92815611,92875794..92877456
Genome context
Sequence	000001 ATTTGAATTG GTGAACTTAG TAAAGCAGAC GGCTCTCACC AATAAGGGCA GGCATCATCC AATCTGTCGA AAGCTTGAAT 000080 000081 AAAACAAAAA GAGGAAGGGA AAATTTGCTT CTTTTCTTCT TGATCTAGTA TATCATCTTC TCCTGCCCTT GGATGTGAGT 000160 000161 GGGCCTTCAG ACTTAAACCA GGAGTTACAC CTTTGGCTTC CCTGGTTCTC AGTTCTTTGG ACTTGGACTG AATTACACTG 000240 000241 CCAGGTTTCC TGGTTCTCCA GCTTGCAGAT GGCAGATCAT GGGACTTCTT GGCCTCCATA ATTGTTATCC CCACTGTGTA 000320 000321 GAGCTGGTCC ACAATGGAGA GGAGGAAAAG TTTTGCATTG GACCAAATCA CTGCCTTAGA AGGAAAGAGA TTGCAATCCC 000400 000401 ATTCATTTTT AAGATCTGCA ATGGGTTGGG ATGATACCCA TTTAAAAAAG AAAAAAAAAG AGGTTACCTC TTTGGCCTCT 000480 000481 TTGGCAAAGG ATATGAACTA GTAATAAAGC CTCAGCATCA AGGCTTGGGA GTCTGGCTCA AAGTGGCTAA GACTAGAAGC 000560 000561 ATCTTCTAAC ATAAATATGG CAGCATTAGG AAAATAGCTT GGCCTTTAGA GAGACCCAGA TTATCTTCAC CTTAAAAACT 000640 000641 ACCAAGACCC TGGTCCAGCA AGACCACCAT CACAGCAGTA AATACATAGC CACCAACTTC ACAGAAGGTT TTCCACTGAG 000720 000721 ACATTGTGAA AACCACAATC CATTACCGGT GGATGAGTCC CAGCTCTCTT ACTACCTGGA GCTTCCAAGC AAGACTTACC 000800 000801 TGTCCTTTGT TCCAGATTGG TTCCTGGGAT CCTGGACCAA CACAAAGAGA AGAGGAAAGC CTCAAGGGAA ATAAAAGTGA 000880 000881 AGGTTTCAGT GATAGTTTAA ATATATATTT TTAAATGTTA GCTTTTTTTT AAATACTTCA CAGTGATGGA TGGAGTATTT 000960 000961 CAACCACAAT GGCAAAGAAT GAATTACCGG CAGTGTCAGA GTTTCTTGTT GCTGTGGGAA GACAGCTGCC ATGTTGAGAG 001040 001041 GTGCCTTGTG GAGAGGCTCA TGTGGCGAGG AACTGAGACT GGCTTCTATC CAACAACCAG TGAGGAACTA AGGCCCTAAA 001120 001121 GTCCTATAGT CCACAAGGAA CTAAATCCTA CCAACAACTA CATGAGTGAG CCTGGAATCT GATTTTCCCC AGTGGGGACT 001200 001201 TAAGGTACCT ACAACCTGGC TGTTATGGGC TAAACTGCAT CCTGCCCAAA TTTATATGTT TGAGTCTTAA CTCCCAGCAC 001280 001281 TTCAGAACAT GGTTTTGTTT GGAGACATAG TCATTAAAGA GGTAATGAAG TTAAAATGAG GTCATTAGGA TGAGTCCTAA 001360 001361 TCCAATAGGA CTGGTGTTCT TATATGAAGA GGAAATTTGA ACACAGACAC ATATACAGGA AAGACCATGC GAAGAAGACA 001440 001441 CAGAGAGGAA ACGGCCATCT ACAATCCAAG GAGAGAGGCC TCAGAACAAG CCAACCCTGC AGATACCTTG ATCTAGGCAT 001520 001521 CCAGAATTGT ATGAAAATAC ATTTTTGTTA TTTAAGCTAC CCAGTCTGTG GTGCTTTGTT ATGGCAATCC CAGAAAACTA 001600 001601 ATTAACTAAT TGACTGCAGC CTTGCAAGGG ACCCTGAACC AGAGGACCCA GTTAAGCCAT GTGCAGATTC CTGACTCACA 001680 001681 GAACTAGGAG ATAACAAATG TTTGTTGTTC TAAGGTGCTA AATGTTGGGA AAATATGTTA TGTGGCTATG TTGTTTTGCA 001760 001761 CATGTGCCAC ATAATGATGT TTTGGTCAAC AACAGACCAC ACATATGATG GTGGGCCCAT AAGATTGTAA TACTGTGTTT 001840 001841 CTATTATGCA TTCTCTATTT ATAGATACAC AAATACTTGC CACTGTGTTA CAATTGCCTA CTGTCTTCAG TACTGTAACA 001920 001921 TGCTGTACAG GTTTGTAGCC CAGAAGCAAT AGACTATACC ATACAGTC

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Predicted Small Protein

Name	`ENST00000508671.1_smProtein_752:913`
Length	`54`
Molecular weight	`5972.5404`

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>ATTTGAATTGGTGAACTTAGTAAAGCAGACGGCTCTCACCAATAAGGGCAGGCATCATCCAATCTGTCGAAAGCTTGAATAAAACAAAAAGAGGAAGGGAAAATTTGCTTCTTTTCTTCTTGATCTAGTATATCATCTTCTCCTGCCCTTGGATGTGAGTGGGCCTTCAGACTTAAACCAGGAGTTACACCTTTGGCTTCCCTGGTTCTCAGTTCTTTGGACTTGGACTGAATTACACTGCCAGGTTTCCTGGTTCTCCAGCTTGCAGATGGCAGATCATGGGACTTCTTGGCCTCCATAATTGTTATCCCCACTGTGTAGAGCTGGTCCACAATGGAGAGGAGGAAAAGTTTTGCATTGGACCAAATCACTGCCTTAGAAGGAAAGAGATTGCAATCCCATTCATTTTTAAGATCTGCAATGGGTTGGGATGATACCCATTTAAAAAAGAAAAAAAAAGAGGTTACCTCTTTGGCCTCTTTGGCAAAGGATATGAACTAGTAATAAAGCCTCAGCATCAAGGCTTGGGAGTCTGGCTCAAAGTGGCTAAGACTAGAAGCATCTTCTAACATAAATATGGCAGCATTAGGAAAATAGCTTGGCCTTTAGAGAGACCCAGATTATCTTCACCTTAAAAACTACCAAGACCCTGGTCCAGCAAGACCACCATCACAGCAGTAAATACATAGCCACCAACTTCACAGAAGGTTTTCCACTGAGACATTGTGAAAACCACAATCCATTACCGGTGGATGAGTCCCAGCTCTCTTACTACCTGGAGCTTCCAAGCAAGACTTACCTGTCCTTTGTTCCAGATTGGTTCCTGGGATCCTGGACCAACACAAAGAGAAGAGGAAAGCCTCAAGGGAAATAAAAGTGAAGGTTTCAGTGATAGTTTAAATATATATTTTTAAATGTTAGCTTTTTTTTAAATACTTCACAGTGATGGATGGAGTATTTCAACCACAATGGCAAAGAATGAATTACCGGCAGTGTCAGAGTTTCTTGTTGCTGTGGGAAGACAGCTGCCATGTTGAGAGGTGCCTTGTGGAGAGGCTCATGTGGCGAGGAACTGAGACTGGCTTCTATCCAACAACCAGTGAGGAACTAAGGCCCTAAAGTCCTATAGTCCACAAGGAACTAAATCCTACCAACAACTACATGAGTGAGCCTGGAATCTGATTTTCCCCAGTGGGGACTTAAGGTACCTACAACCTGGCTGTTATGGGCTAAACTGCATCCTGCCCAAATTTATATGTTTGAGTCTTAACTCCCAGCACTTCAGAACATGGTTTTGTTTGGAGACATAGTCATTAAAGAGGTAATGAAGTTAAAATGAGGTCATTAGGATGAGTCCTAATCCAATAGGACTGGTGTTCTTATATGAAGAGGAAATTTGAACACAGACACATATACAGGAAAGACCATGCGAAGAAGACACAGAGAGGAAACGGCCATCTACAATCCAAGGAGAGAGGCCTCAGAACAAGCCAACCCTGCAGATACCTTGATCTAGGCATCCAGAATTGTATGAAAATACATTTTTGTTATTTAAGCTACCCAGTCTGTGGTGCTTTGTTATGGCAATCCCAGAAAACTAATTAACTAATTGACTGCAGCCTTGCAAGGGACCCTGAACCAGAGGACCCAGTTAAGCCATGTGCAGATTCCTGACTCACAGAACTAGGAGATAACAAATGTTTGTTGTTCTAAGGTGCTAAATGTTGGGAAAATATGTTATGTGGCTATGTTGTTTTGCACATGTGCCACATAATGATGTTTTGGTCAACAACAGACCACACATATGATGGTGGGCCCATAAGATTGTAATACTGTGTTTCTATTATGCATTCTCTATTTATAGATACACAAATACTTGCCACTGTGTTACAATTGCCTACTGTCTTCAGTACTGTAACATGCTGTACAGGTTTGTAGCCCAGAAGCAATAGACTATACCATACAGTC</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-CLLU1.1-1]]
+[[Category:Intergenic]][[Category:lnc-CLLU1.1-1]][[Category:NONHSAG011898]][[Category:ENSG00000266923.1]][[Category:Transcripts]][[Category:Transcripts]]