Difference between revisions of "Lnc-C17orf77-1:3"

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sequence = <dnaseq>GGGAGAGCGGGAAGCTGGGCCTCTTGCTTTTCTTTCACATTCCCAGCATGGTAGATGGGTGTGGACATCAATCCGAAGCCCACCTCCTTTCGAGGGATCAATAGGATGTCTCATCACCGCGCAAATGCGGCTGCCCCTGTTTAACCCCATCACAGCCTGGTGCTTCAGGATCCCTCAAAGTCCAGGGTCAAGGCCCATTCTCTCCCTGGATCCTGCCTTCCCTGCTCCACCGGCTCCCTTCTCCAGCCCAACTCCGTTCCTTTCAAAGGGTCTTGTTCCCTGGAGCCTGCCAGCACCGATCCTGTGTTCCCTAGGAGTCCGGAAGAGGCGAGGCACTGGGGATGCTTCCTGACCTGGCCTTCGTCTCGCTCCACTGTTTGCAGAGCGGTTGTTCTGCTGAGTGGGGATGGCAGTGCCAGGACTTCTAGCGAGACGGGAGAGGCACAAGGGGAAACTTGGCGGGAAGAGACCAAGGGTGCGGCGGCTCCACGGGGAGTGGAACTTGCAAGAAGAACACAGTGGTTTAAAGGGTATTTTTAGGATGTGCAATATGGCAGGCCTGCTCTCACTCAAGAAAACTCTGAGTTAAATTCACATGACTCATCACTGCTTCCATGCCCTGGGCTGGAGGCCAGCTTCGGGGAGAGAACAGGGATGGCCTGAGGGAAAGGGCCCTGGCACTGGGTGTAGGGGAGTGGATGAGGAATAAGACTGGGGAATCAGACTCTTACACGCTGATGGGGACTCCCCAGAACCCACTCGTTTAGCTAGACCAAATATTAAACATGTGGGTGATATGAGGCAGCAGGTCTCAGATCTGCTGTCATAAAGTGGGTCCAAGCAGGAGGAGACCCCTCCCAGGAGAACCAAATAGATAAATAGCCAGGTTGTTAGAAGTGGGGGAATCTTCCTGTGCTTCAAAGAGGTAATAATAATTAGATTTGAGCTTGAAAGATGGGCAGAAGTGACAAAGGGAGACACAAGGCAGAGAGAGGAGCAGAAGCAGGAATACAGGACACAGCAGACCCTCGAGCTTGGCGGGACACAGGATCCTGCTCTGCAACATCCACTTCCTGCTCCCGATCTCCCTGAAGGGGCTGCTGCTCGTGGGCCTGCTCTGCACTGTGCTGCAAGTGAGCAGTGCTAAGGGGGCCTCCAGGGGGAAATAAAGTCACAGCCTGAGCCGGGGAACCGCAGCTCCCACACCATCAACACCCTCGGAGGGGGCAAGCAGAACCTCTGGCCTCCTATCAGGCCTCCTTTCCTTGTGGCTCCAGGATGACCCTGTCAGAGATACTGGACTATCGTTCAGTTGCAGAGGCCCCAGGGCCTGTCTGGACTTTTCCATCCCAAGAGGGGCTCGGCTCTATCCCCTTTGTGCCTGTGACCCTCTCCATCCCCCACCCGGCTCAGAACTGGCACAGCCACCACCAACCACTCCTGATTCAACCCAAGCTTCGCCCTTTCCACCTCTCGAGCTGTGCAACAACAAATGCAGGATGCTCAGCCCTCATGTGTCAGTCCCCTCAATTCACTTGTAATTAAATAACAACACACCTC</dnaseq>|
 
sequence = <dnaseq>GGGAGAGCGGGAAGCTGGGCCTCTTGCTTTTCTTTCACATTCCCAGCATGGTAGATGGGTGTGGACATCAATCCGAAGCCCACCTCCTTTCGAGGGATCAATAGGATGTCTCATCACCGCGCAAATGCGGCTGCCCCTGTTTAACCCCATCACAGCCTGGTGCTTCAGGATCCCTCAAAGTCCAGGGTCAAGGCCCATTCTCTCCCTGGATCCTGCCTTCCCTGCTCCACCGGCTCCCTTCTCCAGCCCAACTCCGTTCCTTTCAAAGGGTCTTGTTCCCTGGAGCCTGCCAGCACCGATCCTGTGTTCCCTAGGAGTCCGGAAGAGGCGAGGCACTGGGGATGCTTCCTGACCTGGCCTTCGTCTCGCTCCACTGTTTGCAGAGCGGTTGTTCTGCTGAGTGGGGATGGCAGTGCCAGGACTTCTAGCGAGACGGGAGAGGCACAAGGGGAAACTTGGCGGGAAGAGACCAAGGGTGCGGCGGCTCCACGGGGAGTGGAACTTGCAAGAAGAACACAGTGGTTTAAAGGGTATTTTTAGGATGTGCAATATGGCAGGCCTGCTCTCACTCAAGAAAACTCTGAGTTAAATTCACATGACTCATCACTGCTTCCATGCCCTGGGCTGGAGGCCAGCTTCGGGGAGAGAACAGGGATGGCCTGAGGGAAAGGGCCCTGGCACTGGGTGTAGGGGAGTGGATGAGGAATAAGACTGGGGAATCAGACTCTTACACGCTGATGGGGACTCCCCAGAACCCACTCGTTTAGCTAGACCAAATATTAAACATGTGGGTGATATGAGGCAGCAGGTCTCAGATCTGCTGTCATAAAGTGGGTCCAAGCAGGAGGAGACCCCTCCCAGGAGAACCAAATAGATAAATAGCCAGGTTGTTAGAAGTGGGGGAATCTTCCTGTGCTTCAAAGAGGTAATAATAATTAGATTTGAGCTTGAAAGATGGGCAGAAGTGACAAAGGGAGACACAAGGCAGAGAGAGGAGCAGAAGCAGGAATACAGGACACAGCAGACCCTCGAGCTTGGCGGGACACAGGATCCTGCTCTGCAACATCCACTTCCTGCTCCCGATCTCCCTGAAGGGGCTGCTGCTCGTGGGCCTGCTCTGCACTGTGCTGCAAGTGAGCAGTGCTAAGGGGGCCTCCAGGGGGAAATAAAGTCACAGCCTGAGCCGGGGAACCGCAGCTCCCACACCATCAACACCCTCGGAGGGGGCAAGCAGAACCTCTGGCCTCCTATCAGGCCTCCTTTCCTTGTGGCTCCAGGATGACCCTGTCAGAGATACTGGACTATCGTTCAGTTGCAGAGGCCCCAGGGCCTGTCTGGACTTTTCCATCCCAAGAGGGGCTCGGCTCTATCCCCTTTGTGCCTGTGACCCTCTCCATCCCCCACCCGGCTCAGAACTGGCACAGCCACCACCAACCACTCCTGATTCAACCCAAGCTTCGCCCTTTCCACCTCTCGAGCTGTGCAACAACAAATGCAGGATGCTCAGCCCTCATGTGTCAGTCCCCTCAATTCACTTGTAATTAAATAACAACACACCTC</dnaseq>|
 
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}}
[[Category:Intergenic]][[Category:lnc-C17orf77-1]][[Category:NONHSAG022705]]
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[[Category:Intergenic]][[Category:lnc-C17orf77-1]][[Category:NONHSAG022705]][[Category:Transcripts]]

Latest revision as of 03:46, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-C17orf77-1:3

Source

LNCipedia2.1

Same with

NONHSAT055800

Classification

intergenic

Length

1560 nt

Genomic location

chr17+:72601129..72603313

Exon number

3

Exons

72601129..72602176,72602560..72602765,72603008..72603313

Genome context

Sequence
000001 GGGAGAGCGG GAAGCTGGGC CTCTTGCTTT TCTTTCACAT TCCCAGCATG GTAGATGGGT GTGGACATCA ATCCGAAGCC 000080
000081 CACCTCCTTT CGAGGGATCA ATAGGATGTC TCATCACCGC GCAAATGCGG CTGCCCCTGT TTAACCCCAT CACAGCCTGG 000160
000161 TGCTTCAGGA TCCCTCAAAG TCCAGGGTCA AGGCCCATTC TCTCCCTGGA TCCTGCCTTC CCTGCTCCAC CGGCTCCCTT 000240
000241 CTCCAGCCCA ACTCCGTTCC TTTCAAAGGG TCTTGTTCCC TGGAGCCTGC CAGCACCGAT CCTGTGTTCC CTAGGAGTCC 000320
000321 GGAAGAGGCG AGGCACTGGG GATGCTTCCT GACCTGGCCT TCGTCTCGCT CCACTGTTTG CAGAGCGGTT GTTCTGCTGA 000400
000401 GTGGGGATGG CAGTGCCAGG ACTTCTAGCG AGACGGGAGA GGCACAAGGG GAAACTTGGC GGGAAGAGAC CAAGGGTGCG 000480
000481 GCGGCTCCAC GGGGAGTGGA ACTTGCAAGA AGAACACAGT GGTTTAAAGG GTATTTTTAG GATGTGCAAT ATGGCAGGCC 000560
000561 TGCTCTCACT CAAGAAAACT CTGAGTTAAA TTCACATGAC TCATCACTGC TTCCATGCCC TGGGCTGGAG GCCAGCTTCG 000640
000641 GGGAGAGAAC AGGGATGGCC TGAGGGAAAG GGCCCTGGCA CTGGGTGTAG GGGAGTGGAT GAGGAATAAG ACTGGGGAAT 000720
000721 CAGACTCTTA CACGCTGATG GGGACTCCCC AGAACCCACT CGTTTAGCTA GACCAAATAT TAAACATGTG GGTGATATGA 000800
000801 GGCAGCAGGT CTCAGATCTG CTGTCATAAA GTGGGTCCAA GCAGGAGGAG ACCCCTCCCA GGAGAACCAA ATAGATAAAT 000880
000881 AGCCAGGTTG TTAGAAGTGG GGGAATCTTC CTGTGCTTCA AAGAGGTAAT AATAATTAGA TTTGAGCTTG AAAGATGGGC 000960
000961 AGAAGTGACA AAGGGAGACA CAAGGCAGAG AGAGGAGCAG AAGCAGGAAT ACAGGACACA GCAGACCCTC GAGCTTGGCG 001040
001041 GGACACAGGA TCCTGCTCTG CAACATCCAC TTCCTGCTCC CGATCTCCCT GAAGGGGCTG CTGCTCGTGG GCCTGCTCTG 001120
001121 CACTGTGCTG CAAGTGAGCA GTGCTAAGGG GGCCTCCAGG GGGAAATAAA GTCACAGCCT GAGCCGGGGA ACCGCAGCTC 001200
001201 CCACACCATC AACACCCTCG GAGGGGGCAA GCAGAACCTC TGGCCTCCTA TCAGGCCTCC TTTCCTTGTG GCTCCAGGAT 001280
001281 GACCCTGTCA GAGATACTGG ACTATCGTTC AGTTGCAGAG GCCCCAGGGC CTGTCTGGAC TTTTCCATCC CAAGAGGGGC 001360
001361 TCGGCTCTAT CCCCTTTGTG CCTGTGACCC TCTCCATCCC CCACCCGGCT CAGAACTGGC ACAGCCACCA CCAACCACTC 001440
001441 CTGATTCAAC CCAAGCTTCG CCCTTTCCAC CTCTCGAGCT GTGCAACAAC AAATGCAGGA TGCTCAGCCC TCATGTGTCA 001520
001521 GTCCCCTCAA TTCACTTGTA ATTAAATAAC AACACACCTC
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