Difference between revisions of "Lnc-PRSS3-1:2"

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sequence = <dnaseq>GGTGAGAAAGGACAGGCCTAGACAATGAAGCAAGGGGCGAGTGGGTGGATGGGTAAAACCACCTGCTCCTCAAAACAGCCAGGCTCTGAGATGAAGCAGGAATCTGCACTTAAACCGAGGCTGGATCCATCCTAGGGATTCAAGCCTGTGTTGTCAAGCGAAAACAGAAAAGAGAAGGGAATTCCACCTTTGCCCACTGAGAACACATCTATGCTGAGAACACATCTACCCAACTCCTCTGTCACAACCCCTGTGAGAAGGTTCTGCCATCTCCCAGCCCTGAAGATTGTGAGCTCCCTGATGGCCCTGGGCCTCCCTCCCGACAGCTGAGGCCCTTCCTGGATCTCTACACGTCACCAAGCTAAGCCAGTGTTCCAAAATAGTCTCCTGAACAATGATGACAACTGCACAGTTATTTTGGAAGAACTTCCTGGCAGTGATGGCAGTGGAACATTGGAAACAGAGATGAACAGGAGGTGGGAAGAGGAGGCTAAGTACATGTAGGCCTAAAAGTCTCTGCCTTGGGAGATTTTTAACAGTCCTGGATGGAGAAAGGGAGAGCCATTTGGTCAAGAGGCTGCCCATCAGATCCTGTGTCCTTCTGCACTGCTAATATCTATCTGTGGCCCTGCTTTAAAACCCAAATACGAACATCTCTTCCATGAAGCCCTTCCTGATTGCCAGTGCCCTCAACAGTGGGATAAACTGCCAGGCATCTTGGAGATCTAGACCCGTGGTTCTCAATCCCGACTTCCCCCGGCCTCCTGAGAAGCTTTTAATAGGTGCATCAGCCCTGGATTCTTACCAGTAGGTCTGAGAGGGAGGCTTAGCGCTTGTGTTCTTTTAATAGTGTGCACAGGGTTGACGGGAAACACACACACACTGTGCAGAACCATTCCACGAGGCTGTGTGTCCGGAATTGGTTCCCTCCAATGGGTTCCTGGTGCCGCTGACTTCAAGAATGAAGCCGCGGACCCTCGCAGTGTTACACTTCTTAAAGACGGTGTGTCCAGAGTTTGTTCCTTCAGATGTTCAGATGTGTCAGGAGTTTCTTCCTTCTACTGGGTTCGTGGTCTATGCACGACTTCATGAGTGAAGCCGCAGACCTTTGCAGTGAGCGTTACAGCTCTTAAAGGTGGTGCGTCCGGAGTTGTTTGTTCCTCCCGGTGGGTTCGTGGTCTGGCTGACTTCAGGGGTGAAGCCGCAGACCTTCACAGTGAGTCTTATAGCTCTTAAAGCCACAGTGAGTCTTATGGCGGCTCCAGAGTTGTTTGTTTCTCATGGTGGGTTCCTGGTCTGGCTGGCTTCAGGAGTGAAGCTGCAAACCTTCACCATGAGTGTTACAGCTCATAAAGGTAGTGTGGACCTAAAAAGTGAGCAGCAGCAAGATTTATTGCAAAAGGGGAAAGAACAAATCTCCCACAATGTGGGAGGGGACCCGAACGGGGAAG</dnaseq>|
 
sequence = <dnaseq>GGTGAGAAAGGACAGGCCTAGACAATGAAGCAAGGGGCGAGTGGGTGGATGGGTAAAACCACCTGCTCCTCAAAACAGCCAGGCTCTGAGATGAAGCAGGAATCTGCACTTAAACCGAGGCTGGATCCATCCTAGGGATTCAAGCCTGTGTTGTCAAGCGAAAACAGAAAAGAGAAGGGAATTCCACCTTTGCCCACTGAGAACACATCTATGCTGAGAACACATCTACCCAACTCCTCTGTCACAACCCCTGTGAGAAGGTTCTGCCATCTCCCAGCCCTGAAGATTGTGAGCTCCCTGATGGCCCTGGGCCTCCCTCCCGACAGCTGAGGCCCTTCCTGGATCTCTACACGTCACCAAGCTAAGCCAGTGTTCCAAAATAGTCTCCTGAACAATGATGACAACTGCACAGTTATTTTGGAAGAACTTCCTGGCAGTGATGGCAGTGGAACATTGGAAACAGAGATGAACAGGAGGTGGGAAGAGGAGGCTAAGTACATGTAGGCCTAAAAGTCTCTGCCTTGGGAGATTTTTAACAGTCCTGGATGGAGAAAGGGAGAGCCATTTGGTCAAGAGGCTGCCCATCAGATCCTGTGTCCTTCTGCACTGCTAATATCTATCTGTGGCCCTGCTTTAAAACCCAAATACGAACATCTCTTCCATGAAGCCCTTCCTGATTGCCAGTGCCCTCAACAGTGGGATAAACTGCCAGGCATCTTGGAGATCTAGACCCGTGGTTCTCAATCCCGACTTCCCCCGGCCTCCTGAGAAGCTTTTAATAGGTGCATCAGCCCTGGATTCTTACCAGTAGGTCTGAGAGGGAGGCTTAGCGCTTGTGTTCTTTTAATAGTGTGCACAGGGTTGACGGGAAACACACACACACTGTGCAGAACCATTCCACGAGGCTGTGTGTCCGGAATTGGTTCCCTCCAATGGGTTCCTGGTGCCGCTGACTTCAAGAATGAAGCCGCGGACCCTCGCAGTGTTACACTTCTTAAAGACGGTGTGTCCAGAGTTTGTTCCTTCAGATGTTCAGATGTGTCAGGAGTTTCTTCCTTCTACTGGGTTCGTGGTCTATGCACGACTTCATGAGTGAAGCCGCAGACCTTTGCAGTGAGCGTTACAGCTCTTAAAGGTGGTGCGTCCGGAGTTGTTTGTTCCTCCCGGTGGGTTCGTGGTCTGGCTGACTTCAGGGGTGAAGCCGCAGACCTTCACAGTGAGTCTTATAGCTCTTAAAGCCACAGTGAGTCTTATGGCGGCTCCAGAGTTGTTTGTTTCTCATGGTGGGTTCCTGGTCTGGCTGGCTTCAGGAGTGAAGCTGCAAACCTTCACCATGAGTGTTACAGCTCATAAAGGTAGTGTGGACCTAAAAAGTGAGCAGCAGCAAGATTTATTGCAAAAGGGGAAAGAACAAATCTCCCACAATGTGGGAGGGGACCCGAACGGGGAAG</dnaseq>|
 
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}}
[[Category:Intergenic]][[Category:lnc-PRSS3-1]]
+
[[Category:Intergenic]][[Category:lnc-PRSS3-1]][[Category:NONHSAG052048]][[Category:Transcripts]]

Latest revision as of 05:00, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-PRSS3-1:2

Source

LNCipedia2.1

Same with

NONHSAT130794

Classification

intergenic

Length

1451 nt

Genomic location

chr9+:33730335..33749410

Exon number

5

Exons

33730335..33730477,33731149..33731298,33731762..33731892,33733126..33733252,33748511..33749410

Genome context

Sequence
000001 GGTGAGAAAG GACAGGCCTA GACAATGAAG CAAGGGGCGA GTGGGTGGAT GGGTAAAACC ACCTGCTCCT CAAAACAGCC 000080
000081 AGGCTCTGAG ATGAAGCAGG AATCTGCACT TAAACCGAGG CTGGATCCAT CCTAGGGATT CAAGCCTGTG TTGTCAAGCG 000160
000161 AAAACAGAAA AGAGAAGGGA ATTCCACCTT TGCCCACTGA GAACACATCT ATGCTGAGAA CACATCTACC CAACTCCTCT 000240
000241 GTCACAACCC CTGTGAGAAG GTTCTGCCAT CTCCCAGCCC TGAAGATTGT GAGCTCCCTG ATGGCCCTGG GCCTCCCTCC 000320
000321 CGACAGCTGA GGCCCTTCCT GGATCTCTAC ACGTCACCAA GCTAAGCCAG TGTTCCAAAA TAGTCTCCTG AACAATGATG 000400
000401 ACAACTGCAC AGTTATTTTG GAAGAACTTC CTGGCAGTGA TGGCAGTGGA ACATTGGAAA CAGAGATGAA CAGGAGGTGG 000480
000481 GAAGAGGAGG CTAAGTACAT GTAGGCCTAA AAGTCTCTGC CTTGGGAGAT TTTTAACAGT CCTGGATGGA GAAAGGGAGA 000560
000561 GCCATTTGGT CAAGAGGCTG CCCATCAGAT CCTGTGTCCT TCTGCACTGC TAATATCTAT CTGTGGCCCT GCTTTAAAAC 000640
000641 CCAAATACGA ACATCTCTTC CATGAAGCCC TTCCTGATTG CCAGTGCCCT CAACAGTGGG ATAAACTGCC AGGCATCTTG 000720
000721 GAGATCTAGA CCCGTGGTTC TCAATCCCGA CTTCCCCCGG CCTCCTGAGA AGCTTTTAAT AGGTGCATCA GCCCTGGATT 000800
000801 CTTACCAGTA GGTCTGAGAG GGAGGCTTAG CGCTTGTGTT CTTTTAATAG TGTGCACAGG GTTGACGGGA AACACACACA 000880
000881 CACTGTGCAG AACCATTCCA CGAGGCTGTG TGTCCGGAAT TGGTTCCCTC CAATGGGTTC CTGGTGCCGC TGACTTCAAG 000960
000961 AATGAAGCCG CGGACCCTCG CAGTGTTACA CTTCTTAAAG ACGGTGTGTC CAGAGTTTGT TCCTTCAGAT GTTCAGATGT 001040
001041 GTCAGGAGTT TCTTCCTTCT ACTGGGTTCG TGGTCTATGC ACGACTTCAT GAGTGAAGCC GCAGACCTTT GCAGTGAGCG 001120
001121 TTACAGCTCT TAAAGGTGGT GCGTCCGGAG TTGTTTGTTC CTCCCGGTGG GTTCGTGGTC TGGCTGACTT CAGGGGTGAA 001200
001201 GCCGCAGACC TTCACAGTGA GTCTTATAGC TCTTAAAGCC ACAGTGAGTC TTATGGCGGC TCCAGAGTTG TTTGTTTCTC 001280
001281 ATGGTGGGTT CCTGGTCTGG CTGGCTTCAG GAGTGAAGCT GCAAACCTTC ACCATGAGTG TTACAGCTCA TAAAGGTAGT 001360
001361 GTGGACCTAA AAAGTGAGCA GCAGCAAGAT TTATTGCAAA AGGGGAAAGA ACAAATCTCC CACAATGTGG GAGGGGACCC 001440
001441 GAACGGGGAA G
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