Difference between revisions of "Lnc-SERPINI1-4:8"

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sequence = <dnaseq>CTGCAAGGCAAAAACATGCTAACTGACAAGAAAATCATGGGTTTTATACAAGGATAACAAGTGCTGGGTTGCTTAGCTATGAGGAAGGCTAGGCTCACTGCATACCAGAAGATGTACAGCGTTGGAGAATTCAGGGATTTTTATCAACAATCAAACTATATTTGTGGAAATTTTGTGCATAAGTGCCAAAGATGGCTGACATCGGACCACATTCTATTTAACTCAACTGAATGACACCAAGCTCTCATCCTAAAACTTATAGTTACATCCACCCTTCTGAAATATTTAATTATTCTCCAATACACTGGAGGTAATAGGTATAAAAAGAATGAGCATGTGCAACTTAGTATCTCATATCTAATTTTGTGTCCCAAGTTCATTCTTCCCCTGAATGTCCCATGTCTACCAGGTGCAGGATTATCTGGATGGGTCAGTTCAAAACAATTTCAGGGAATAAATTGTGTAGGGGACTCAATTTTCTGAGACAGAAACATAATGTGAATAACTCCTTTGTTAGAAAATAATTTCAGTGACAGAAAGCCTTTCAGTTCATAAAGAAAACTTACATATCAACAAGCCTAGCTCCTCACTAGTCCCAGTGAATGCTTACATCAATCAGCTCTACAATATCCAGTAAAGGACTTTCCAATTCGCCTTTGAATAAACTGAGGTATTGGAAACATCTAAGAAAATGGTTTTTAATTCTTCCTAATCTTCAGGGAGTTCTTCCTTATATTGAGCTGATATCTGCCCTCTGTAACTTTCAACTAATTATTCAAATCTCTCAAGTGATTATAATTAATTCCATCTTATAAGGAATTTTTCTCAGCTTCCAGCCTCTTGAAAATACTCTGATATTTTCTCTAATATTCAAGTGGAAATGTAAATGGGTAACGTAAGAGTCTGTGGGGTTAGGAGGGTGGAGGAAAGGTAAGGGAAAGCTAATGAGAAATAACCAAAGCAAGAAAAAGAATTTTATTTTCTTCAAGTTCTTTGTACATCCAAAGTGGAAGATTCCTAAAATAAATTCCCCATACCACATTTTAAAAATTAGGTTAGCAAGCTTACTTTTTAATTTATTTAGAAGCCAACTACTTCCATTTATTATTTCTTTCCAGAATAGAACAATTATCACTAATTGTTTGTCATTATAATGCCAAACTATGTTAATAGATGCCTATTTTTTTAAAGGCTAATTGCAATCATGAAACCAAATATCTAATTAGTTTTAGAGCTTTGGACCACATGCATCAATATTTGAATCATTCAGGTGTATATTTGCTTTCTGCTTTTTTGTCTCTTCAAAAGAAGTATTATATGCATTCTGTTTATAATTTCT</dnaseq>|
 
sequence = <dnaseq>CTGCAAGGCAAAAACATGCTAACTGACAAGAAAATCATGGGTTTTATACAAGGATAACAAGTGCTGGGTTGCTTAGCTATGAGGAAGGCTAGGCTCACTGCATACCAGAAGATGTACAGCGTTGGAGAATTCAGGGATTTTTATCAACAATCAAACTATATTTGTGGAAATTTTGTGCATAAGTGCCAAAGATGGCTGACATCGGACCACATTCTATTTAACTCAACTGAATGACACCAAGCTCTCATCCTAAAACTTATAGTTACATCCACCCTTCTGAAATATTTAATTATTCTCCAATACACTGGAGGTAATAGGTATAAAAAGAATGAGCATGTGCAACTTAGTATCTCATATCTAATTTTGTGTCCCAAGTTCATTCTTCCCCTGAATGTCCCATGTCTACCAGGTGCAGGATTATCTGGATGGGTCAGTTCAAAACAATTTCAGGGAATAAATTGTGTAGGGGACTCAATTTTCTGAGACAGAAACATAATGTGAATAACTCCTTTGTTAGAAAATAATTTCAGTGACAGAAAGCCTTTCAGTTCATAAAGAAAACTTACATATCAACAAGCCTAGCTCCTCACTAGTCCCAGTGAATGCTTACATCAATCAGCTCTACAATATCCAGTAAAGGACTTTCCAATTCGCCTTTGAATAAACTGAGGTATTGGAAACATCTAAGAAAATGGTTTTTAATTCTTCCTAATCTTCAGGGAGTTCTTCCTTATATTGAGCTGATATCTGCCCTCTGTAACTTTCAACTAATTATTCAAATCTCTCAAGTGATTATAATTAATTCCATCTTATAAGGAATTTTTCTCAGCTTCCAGCCTCTTGAAAATACTCTGATATTTTCTCTAATATTCAAGTGGAAATGTAAATGGGTAACGTAAGAGTCTGTGGGGTTAGGAGGGTGGAGGAAAGGTAAGGGAAAGCTAATGAGAAATAACCAAAGCAAGAAAAAGAATTTTATTTTCTTCAAGTTCTTTGTACATCCAAAGTGGAAGATTCCTAAAATAAATTCCCCATACCACATTTTAAAAATTAGGTTAGCAAGCTTACTTTTTAATTTATTTAGAAGCCAACTACTTCCATTTATTATTTCTTTCCAGAATAGAACAATTATCACTAATTGTTTGTCATTATAATGCCAAACTATGTTAATAGATGCCTATTTTTTTAAAGGCTAATTGCAATCATGAAACCAAATATCTAATTAGTTTTAGAGCTTTGGACCACATGCATCAATATTTGAATCATTCAGGTGTATATTTGCTTTCTGCTTTTTTGTCTCTTCAAAAGAAGTATTATATGCATTCTGTTTATAATTTCT</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-SERPINI1-4]][[Category:NONHSAG036597]]
+
[[Category:Intergenic]][[Category:lnc-SERPINI1-4]][[Category:NONHSAG036597]][[Category:Transcripts]]

Latest revision as of 05:15, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-SERPINI1-4:8

Source

LNCipedia2.1

Same with

NONHSAT093119

Classification

intergenic

Length

1339 nt

Genomic location

chr3+:167630686..167641415

Exon number

3

Exons

167630686..167630692,167639732..167639824,167640177..167641415

Genome context

Sequence
000001 CTGCAAGGCA AAAACATGCT AACTGACAAG AAAATCATGG GTTTTATACA AGGATAACAA GTGCTGGGTT GCTTAGCTAT 000080
000081 GAGGAAGGCT AGGCTCACTG CATACCAGAA GATGTACAGC GTTGGAGAAT TCAGGGATTT TTATCAACAA TCAAACTATA 000160
000161 TTTGTGGAAA TTTTGTGCAT AAGTGCCAAA GATGGCTGAC ATCGGACCAC ATTCTATTTA ACTCAACTGA ATGACACCAA 000240
000241 GCTCTCATCC TAAAACTTAT AGTTACATCC ACCCTTCTGA AATATTTAAT TATTCTCCAA TACACTGGAG GTAATAGGTA 000320
000321 TAAAAAGAAT GAGCATGTGC AACTTAGTAT CTCATATCTA ATTTTGTGTC CCAAGTTCAT TCTTCCCCTG AATGTCCCAT 000400
000401 GTCTACCAGG TGCAGGATTA TCTGGATGGG TCAGTTCAAA ACAATTTCAG GGAATAAATT GTGTAGGGGA CTCAATTTTC 000480
000481 TGAGACAGAA ACATAATGTG AATAACTCCT TTGTTAGAAA ATAATTTCAG TGACAGAAAG CCTTTCAGTT CATAAAGAAA 000560
000561 ACTTACATAT CAACAAGCCT AGCTCCTCAC TAGTCCCAGT GAATGCTTAC ATCAATCAGC TCTACAATAT CCAGTAAAGG 000640
000641 ACTTTCCAAT TCGCCTTTGA ATAAACTGAG GTATTGGAAA CATCTAAGAA AATGGTTTTT AATTCTTCCT AATCTTCAGG 000720
000721 GAGTTCTTCC TTATATTGAG CTGATATCTG CCCTCTGTAA CTTTCAACTA ATTATTCAAA TCTCTCAAGT GATTATAATT 000800
000801 AATTCCATCT TATAAGGAAT TTTTCTCAGC TTCCAGCCTC TTGAAAATAC TCTGATATTT TCTCTAATAT TCAAGTGGAA 000880
000881 ATGTAAATGG GTAACGTAAG AGTCTGTGGG GTTAGGAGGG TGGAGGAAAG GTAAGGGAAA GCTAATGAGA AATAACCAAA 000960
000961 GCAAGAAAAA GAATTTTATT TTCTTCAAGT TCTTTGTACA TCCAAAGTGG AAGATTCCTA AAATAAATTC CCCATACCAC 001040
001041 ATTTTAAAAA TTAGGTTAGC AAGCTTACTT TTTAATTTAT TTAGAAGCCA ACTACTTCCA TTTATTATTT CTTTCCAGAA 001120
001121 TAGAACAATT ATCACTAATT GTTTGTCATT ATAATGCCAA ACTATGTTAA TAGATGCCTA TTTTTTTAAA GGCTAATTGC 001200
001201 AATCATGAAA CCAAATATCT AATTAGTTTT AGAGCTTTGG ACCACATGCA TCAATATTTG AATCATTCAG GTGTATATTT 001280
001281 GCTTTCTGCT TTTTTGTCTC TTCAAAAGAA GTATTATATG CATTCTGTTT ATAATTTCT
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