Difference between revisions of "ENST00000417721.1"

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sequence = <dnaseq>CGGGGGCCCAGGGTGGAGAGCACGAGGGCCTGGCCCAGGCACGGCCGGCGCCTCCGCCCTCGAGGAGGGCGTCACCTCAGCTCCCCCCGGCGGCGGAGCCGGCGGGCTCAGGCGGGCGCGGCTGAGGGGAGCGGACCGCGGGGGGCGGGAGATGACTGCGCCCAAGGCCTTTGCGGGCCTCAGCCGGCCCCAGAGGAAGGGGAACCCGTCGAGCGGTTTGGTGCGTGTGAAGCGCGACATGGCGAGGAAGCGGACAAGCCCGGGTGGCCCGGCGTGTAGAGGGAAGGGGGCGGGGCTAGACGCGGCCTGGACAACTACTAGAGCGCCTCGGGCTGTGCTGCTCGAGACTACATTTCCCAGAGCGACGCGCGCGGAGCGGGCGGGAAAGAGAGCGTTTCGGGTCCAGTGCGCAGGTGCGAAAGCCATCTTTGGTTATATAAGGGAGGTTCAGGAAGCCATTCGTTCTTTCGCGTCTGCGGTGCCCGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGGCTTCATACGCTATTGTCCTGCCCGTTAGAGCAGCCAGCGGGTACAGAATGGATTTTGGAAGAGGGAGTCACCACTGGACCTCCAAGGAAGCCACGTGCAGACATCTACAACCTTCGATCTCCTGACGAAAACTGGCGATGGAATATGAGAGGAGCCCTCTGGAAAGAAAAGGACAGACCCTGTGCTTTCATGAAAGTGAAGATCTGGCTGAACCAGTTCCACAAGGTTACTGTATACATAGCCTGAGTTTAAAAGGCTGTGCCCACTTCAAGAATGTCATTGTTAGACTTTGAAATTTCTAACTGCCTACCTGCATAAAGAAAATAAAATCTTTTAAATCAAAA</dnaseq>|
 
sequence = <dnaseq>CGGGGGCCCAGGGTGGAGAGCACGAGGGCCTGGCCCAGGCACGGCCGGCGCCTCCGCCCTCGAGGAGGGCGTCACCTCAGCTCCCCCCGGCGGCGGAGCCGGCGGGCTCAGGCGGGCGCGGCTGAGGGGAGCGGACCGCGGGGGGCGGGAGATGACTGCGCCCAAGGCCTTTGCGGGCCTCAGCCGGCCCCAGAGGAAGGGGAACCCGTCGAGCGGTTTGGTGCGTGTGAAGCGCGACATGGCGAGGAAGCGGACAAGCCCGGGTGGCCCGGCGTGTAGAGGGAAGGGGGCGGGGCTAGACGCGGCCTGGACAACTACTAGAGCGCCTCGGGCTGTGCTGCTCGAGACTACATTTCCCAGAGCGACGCGCGCGGAGCGGGCGGGAAAGAGAGCGTTTCGGGTCCAGTGCGCAGGTGCGAAAGCCATCTTTGGTTATATAAGGGAGGTTCAGGAAGCCATTCGTTCTTTCGCGTCTGCGGTGCCCGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGGCTTCATACGCTATTGTCCTGCCCGTTAGAGCAGCCAGCGGGTACAGAATGGATTTTGGAAGAGGGAGTCACCACTGGACCTCCAAGGAAGCCACGTGCAGACATCTACAACCTTCGATCTCCTGACGAAAACTGGCGATGGAATATGAGAGGAGCCCTCTGGAAAGAAAAGGACAGACCCTGTGCTTTCATGAAAGTGAAGATCTGGCTGAACCAGTTCCACAAGGTTACTGTATACATAGCCTGAGTTTAAAAGGCTGTGCCCACTTCAAGAATGTCATTGTTAGACTTTGAAATTTCTAACTGCCTACCTGCATAAAGAAAATAAAATCTTTTAAATCAAAA</dnaseq>|
 
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[[Category:Intergenic]][[Category:lnc-DDX27-1]][[Category:NONHSAG031976]][[Category:ENSG00000177410.8]]
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[[Category:Intergenic]][[Category:lnc-DDX27-1]][[Category:NONHSAG031976]][[Category:ENSG00000177410.8]][[Category:Transcripts]]

Latest revision as of 14:58, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000417721.1

Source

Gencode19

Same with

lnc-DDX27-1:1,NONHSAT080205

Classification

intergenic

Length

860 nt

Genomic location

chr20+:47894715..47905797

Exon number

3

Exons

47894715..47895253,47895641..47895745,47905582..47905797

Genome context

Sequence
000001 CGGGGGCCCA GGGTGGAGAG CACGAGGGCC TGGCCCAGGC ACGGCCGGCG CCTCCGCCCT CGAGGAGGGC GTCACCTCAG 000080
000081 CTCCCCCCGG CGGCGGAGCC GGCGGGCTCA GGCGGGCGCG GCTGAGGGGA GCGGACCGCG GGGGGCGGGA GATGACTGCG 000160
000161 CCCAAGGCCT TTGCGGGCCT CAGCCGGCCC CAGAGGAAGG GGAACCCGTC GAGCGGTTTG GTGCGTGTGA AGCGCGACAT 000240
000241 GGCGAGGAAG CGGACAAGCC CGGGTGGCCC GGCGTGTAGA GGGAAGGGGG CGGGGCTAGA CGCGGCCTGG ACAACTACTA 000320
000321 GAGCGCCTCG GGCTGTGCTG CTCGAGACTA CATTTCCCAG AGCGACGCGC GCGGAGCGGG CGGGAAAGAG AGCGTTTCGG 000400
000401 GTCCAGTGCG CAGGTGCGAA AGCCATCTTT GGTTATATAA GGGAGGTTCA GGAAGCCATT CGTTCTTTCG CGTCTGCGGT 000480
000481 GCCCGGAGTG TGGTACTTCT CCTAGTTGCA GTCAGGCTTC ATACGCTATT GTCCTGCCCG TTAGAGCAGC CAGCGGGTAC 000560
000561 AGAATGGATT TTGGAAGAGG GAGTCACCAC TGGACCTCCA AGGAAGCCAC GTGCAGACAT CTACAACCTT CGATCTCCTG 000640
000641 ACGAAAACTG GCGATGGAAT ATGAGAGGAG CCCTCTGGAA AGAAAAGGAC AGACCCTGTG CTTTCATGAA AGTGAAGATC 000720
000721 TGGCTGAACC AGTTCCACAA GGTTACTGTA TACATAGCCT GAGTTTAAAA GGCTGTGCCC ACTTCAAGAA TGTCATTGTT 000800
000801 AGACTTTGAA ATTTCTAACT GCCTACCTGC ATAAAGAAAA TAAAATCTTT TAAATCAAAA
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