Difference between revisions of "NONHSAT099987"

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sequence = <dnaseq>tctgcccgccttggccttctcaaagtgctgggattacagacatgagccaccgcgcccggccAAAactgggcttttctacggtggggagagcagagctattctctctggggtgggtgcttgtctgggacttgtcaccatcccttactccagggctgtcttcagcactgtcgcccacagtctttccgaacgccttattcagatgttataatttcccacacgatgttcctgaccaagaaacgcattttacagcaaaggggtgaggaacggatctgtggccataggatcccagagccgtgtccccgccactcaggagcaggcgacctgagcagaagggCTTGGCGCTGGTGGGCAGTGGGAGCCCTGCCATGGGCGGCCCGAGGGGTGGTGGGATCCCCGCCGTGGGCAACCCCGGGGGCGGTGGGAGCCACGCTGTGGGTGGGCTGGAGGCCCTACTGGGTGTGCTACCGGAAGGGAGGTCCTGACTGTGAgtccatgttcctggcatgttgaacaaagaattgagcaaaactcacaaaacgacaaataacagagtaatgaaagcgcagatcctttgcagtgaacatgcactccacaaggggggacgggactccagcaagtgctccggagcccccattagggtttgtattgggctaaaagaatttggtaacacccccaggtgccctttccaggtctctgattggctgcatcctatgaagactggcctgcggccaatcagaggctgaggtggagactcctgtcttgttttcccaggaaggaggctgcggcctgtgtgccgcccaatccagccaggaaccggtggcacctgctgccctccggcttctgccttagccctcggtgaccccattccctgttctcctgcctcaGGTGCAGGGCGATGGTTCTCAGTCAACGCTGGGGCCAGAGCCGGGGCTGGGGCCGCTCGTTCTGCACAGGTCCCGGGAGTGGCGGTGAGCAATGCTCTCGCTCTCAGCGACCCACGTGCAAAGCGCTCCCTGCGCCCCCGACCCCGCAGCTTTGGGCTCTGCTGACTTCAAGGCTTCATTCTTCCTCCAGGAGAACACAGCAGGTCCCTCCGACCGCAGTCGGCCTCTCCAGCCTGCCATGCCTCTGGCCATGAGGCGACCCGCTGGAGTGATGGATTCCCGTCACTACCACCCACAGGGCGAGGGGGtgcattggtctgcttgggccgctgtaacaaaatgccacagcctggatgagtgactgacattgcttccccaccgttctggaggctggaggcccgagatcgaggtCCCTGACACTATTTCAGTGATGCCAGAGCCCAGGAGGAGTCGACCAAGCCCCAGCGTGGCCATAAGCACCTTCGCAGGACCACGGAGTCGCTGCAGGTGTTCAGCCCTGTTGAGAGTGGGAGTCGGTGTCGATGGTCACAGCTCAGTAACTCATCGTCACCAGCGAGTACCACAGAGCAGACACAACTGCACTTCTCTGTAGAGCCTCCAGTCGATACTGAGAGCCACTGGGGCGTCTGACACCCAAGGGTGCAGACATTCACTCCAAGTCCAGAGACCGCGCCCTTTCTAAGGCCCTGTCTCACAGTCGCCCCGTGCTCATTGTGCCGGATGTTTCCACAGCCACAGAGACGGTGCGTGAAGGTGAGGTGCAGCCTAGTGCATATGACTGACAGAAACGTGAAGCCACAGTGGACGCCTGGATGAGACACAGATCACCTTCCAAATCTGAGTGTGGCCTTGGGACCAACCAGGCAGCCAGGGAGAAGGCAGAGACCAGAGGGAACCCAGGTGCcctcaatcccagcctcctctatcccagcctcccaatcccagcctccccaatcccagcctcctaatcccagcctcctccatcccaggacccccactcccagcctcccgatcccagcTTCTCTGATCCCAGCCTCCCCTAAAACCCAGACTCTATGAATCCCAGcctctgaggtgggaactgttagtaaccccactccatggacaagaaagctggggcctggcgaggctaaCAGACTATCCTGATGGTGTGAGGGAGGGATCGGCCTCTGAGGGCTGCTTCCACCCATCTCACCAGTGGCTGCAGGCTCCAGGCGCCACTTTCCTTGAGTCTATGTTCTTTCCAAGCATCCTGCAGCTCCAGAAGCTCTGGAGCCGCCAGCACTGAGAGAAGCGATGGAGCTGCATGCAGGGAAACTTTGTTGACAGCGGTGTCTGGATGGACCAGCAGAGGGCACTCTCACCCACGGGGAAAATCGTGCGCCCGGCCTCGTCCACCGCCAGAAGACGCCGC</dnaseq>|
 
sequence = <dnaseq>tctgcccgccttggccttctcaaagtgctgggattacagacatgagccaccgcgcccggccAAAactgggcttttctacggtggggagagcagagctattctctctggggtgggtgcttgtctgggacttgtcaccatcccttactccagggctgtcttcagcactgtcgcccacagtctttccgaacgccttattcagatgttataatttcccacacgatgttcctgaccaagaaacgcattttacagcaaaggggtgaggaacggatctgtggccataggatcccagagccgtgtccccgccactcaggagcaggcgacctgagcagaagggCTTGGCGCTGGTGGGCAGTGGGAGCCCTGCCATGGGCGGCCCGAGGGGTGGTGGGATCCCCGCCGTGGGCAACCCCGGGGGCGGTGGGAGCCACGCTGTGGGTGGGCTGGAGGCCCTACTGGGTGTGCTACCGGAAGGGAGGTCCTGACTGTGAgtccatgttcctggcatgttgaacaaagaattgagcaaaactcacaaaacgacaaataacagagtaatgaaagcgcagatcctttgcagtgaacatgcactccacaaggggggacgggactccagcaagtgctccggagcccccattagggtttgtattgggctaaaagaatttggtaacacccccaggtgccctttccaggtctctgattggctgcatcctatgaagactggcctgcggccaatcagaggctgaggtggagactcctgtcttgttttcccaggaaggaggctgcggcctgtgtgccgcccaatccagccaggaaccggtggcacctgctgccctccggcttctgccttagccctcggtgaccccattccctgttctcctgcctcaGGTGCAGGGCGATGGTTCTCAGTCAACGCTGGGGCCAGAGCCGGGGCTGGGGCCGCTCGTTCTGCACAGGTCCCGGGAGTGGCGGTGAGCAATGCTCTCGCTCTCAGCGACCCACGTGCAAAGCGCTCCCTGCGCCCCCGACCCCGCAGCTTTGGGCTCTGCTGACTTCAAGGCTTCATTCTTCCTCCAGGAGAACACAGCAGGTCCCTCCGACCGCAGTCGGCCTCTCCAGCCTGCCATGCCTCTGGCCATGAGGCGACCCGCTGGAGTGATGGATTCCCGTCACTACCACCCACAGGGCGAGGGGGtgcattggtctgcttgggccgctgtaacaaaatgccacagcctggatgagtgactgacattgcttccccaccgttctggaggctggaggcccgagatcgaggtCCCTGACACTATTTCAGTGATGCCAGAGCCCAGGAGGAGTCGACCAAGCCCCAGCGTGGCCATAAGCACCTTCGCAGGACCACGGAGTCGCTGCAGGTGTTCAGCCCTGTTGAGAGTGGGAGTCGGTGTCGATGGTCACAGCTCAGTAACTCATCGTCACCAGCGAGTACCACAGAGCAGACACAACTGCACTTCTCTGTAGAGCCTCCAGTCGATACTGAGAGCCACTGGGGCGTCTGACACCCAAGGGTGCAGACATTCACTCCAAGTCCAGAGACCGCGCCCTTTCTAAGGCCCTGTCTCACAGTCGCCCCGTGCTCATTGTGCCGGATGTTTCCACAGCCACAGAGACGGTGCGTGAAGGTGAGGTGCAGCCTAGTGCATATGACTGACAGAAACGTGAAGCCACAGTGGACGCCTGGATGAGACACAGATCACCTTCCAAATCTGAGTGTGGCCTTGGGACCAACCAGGCAGCCAGGGAGAAGGCAGAGACCAGAGGGAACCCAGGTGCcctcaatcccagcctcctctatcccagcctcccaatcccagcctccccaatcccagcctcctaatcccagcctcctccatcccaggacccccactcccagcctcccgatcccagcTTCTCTGATCCCAGCCTCCCCTAAAACCCAGACTCTATGAATCCCAGcctctgaggtgggaactgttagtaaccccactccatggacaagaaagctggggcctggcgaggctaaCAGACTATCCTGATGGTGTGAGGGAGGGATCGGCCTCTGAGGGCTGCTTCCACCCATCTCACCAGTGGCTGCAGGCTCCAGGCGCCACTTTCCTTGAGTCTATGTTCTTTCCAAGCATCCTGCAGCTCCAGAAGCTCTGGAGCCGCCAGCACTGAGAGAAGCGATGGAGCTGCATGCAGGGAAACTTTGTTGACAGCGGTGTCTGGATGGACCAGCAGAGGGCACTCTCACCCACGGGGAAAATCGTGCGCCCGGCCTCGTCCACCGCCAGAAGACGCCGC</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:NONHSAG039664]][[Category:Transcripts]]
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[[Category:Intergenic]][[Category:NONHSAG039664]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 01:13, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT099987

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2319 nt

Genomic location

chr5-:1174645..1177733

Exon number

3

Exons

1174645..1174745,1175244..1175803,1176076..1177733

Genome context

Sequence
000001 tctgcccgcc ttggccttct caaagtgctg ggattacaga catgagccac cgcgcccggc cAAAactggg cttttctacg 000080
000081 gtggggagag cagagctatt ctctctgggg tgggtgcttg tctgggactt gtcaccatcc cttactccag ggctgtcttc 000160
000161 agcactgtcg cccacagtct ttccgaacgc cttattcaga tgttataatt tcccacacga tgttcctgac caagaaacgc 000240
000241 attttacagc aaaggggtga ggaacggatc tgtggccata ggatcccaga gccgtgtccc cgccactcag gagcaggcga 000320
000321 cctgagcaga agggCTTGGC GCTGGTGGGC AGTGGGAGCC CTGCCATGGG CGGCCCGAGG GGTGGTGGGA TCCCCGCCGT 000400
000401 GGGCAACCCC GGGGGCGGTG GGAGCCACGC TGTGGGTGGG CTGGAGGCCC TACTGGGTGT GCTACCGGAA GGGAGGTCCT 000480
000481 GACTGTGAgt ccatgttcct ggcatgttga acaaagaatt gagcaaaact cacaaaacga caaataacag agtaatgaaa 000560
000561 gcgcagatcc tttgcagtga acatgcactc cacaaggggg gacgggactc cagcaagtgc tccggagccc ccattagggt 000640
000641 ttgtattggg ctaaaagaat ttggtaacac ccccaggtgc cctttccagg tctctgattg gctgcatcct atgaagactg 000720
000721 gcctgcggcc aatcagaggc tgaggtggag actcctgtct tgttttccca ggaaggaggc tgcggcctgt gtgccgccca 000800
000801 atccagccag gaaccggtgg cacctgctgc cctccggctt ctgccttagc cctcggtgac cccattccct gttctcctgc 000880
000881 ctcaGGTGCA GGGCGATGGT TCTCAGTCAA CGCTGGGGCC AGAGCCGGGG CTGGGGCCGC TCGTTCTGCA CAGGTCCCGG 000960
000961 GAGTGGCGGT GAGCAATGCT CTCGCTCTCA GCGACCCACG TGCAAAGCGC TCCCTGCGCC CCCGACCCCG CAGCTTTGGG 001040
001041 CTCTGCTGAC TTCAAGGCTT CATTCTTCCT CCAGGAGAAC ACAGCAGGTC CCTCCGACCG CAGTCGGCCT CTCCAGCCTG 001120
001121 CCATGCCTCT GGCCATGAGG CGACCCGCTG GAGTGATGGA TTCCCGTCAC TACCACCCAC AGGGCGAGGG GGtgcattgg 001200
001201 tctgcttggg ccgctgtaac aaaatgccac agcctggatg agtgactgac attgcttccc caccgttctg gaggctggag 001280
001281 gcccgagatc gaggtCCCTG ACACTATTTC AGTGATGCCA GAGCCCAGGA GGAGTCGACC AAGCCCCAGC GTGGCCATAA 001360
001361 GCACCTTCGC AGGACCACGG AGTCGCTGCA GGTGTTCAGC CCTGTTGAGA GTGGGAGTCG GTGTCGATGG TCACAGCTCA 001440
001441 GTAACTCATC GTCACCAGCG AGTACCACAG AGCAGACACA ACTGCACTTC TCTGTAGAGC CTCCAGTCGA TACTGAGAGC 001520
001521 CACTGGGGCG TCTGACACCC AAGGGTGCAG ACATTCACTC CAAGTCCAGA GACCGCGCCC TTTCTAAGGC CCTGTCTCAC 001600
001601 AGTCGCCCCG TGCTCATTGT GCCGGATGTT TCCACAGCCA CAGAGACGGT GCGTGAAGGT GAGGTGCAGC CTAGTGCATA 001680
001681 TGACTGACAG AAACGTGAAG CCACAGTGGA CGCCTGGATG AGACACAGAT CACCTTCCAA ATCTGAGTGT GGCCTTGGGA 001760
001761 CCAACCAGGC AGCCAGGGAG AAGGCAGAGA CCAGAGGGAA CCCAGGTGCc ctcaatccca gcctcctcta tcccagcctc 001840
001841 ccaatcccag cctccccaat cccagcctcc taatcccagc ctcctccatc ccaggacccc cactcccagc ctcccgatcc 001920
001921 cagcTTCTCT GATCCCAGCC TCCCCTAAAA CCCAGACTCT ATGAATCCCA Gcctctgagg tgggaactgt tagtaacccc 002000
002001 actccatgga caagaaagct ggggcctggc gaggctaaCA GACTATCCTG ATGGTGTGAG GGAGGGATCG GCCTCTGAGG 002080
002081 GCTGCTTCCA CCCATCTCAC CAGTGGCTGC AGGCTCCAGG CGCCACTTTC CTTGAGTCTA TGTTCTTTCC AAGCATCCTG 002160
002161 CAGCTCCAGA AGCTCTGGAG CCGCCAGCAC TGAGAGAAGC GATGGAGCTG CATGCAGGGA AACTTTGTTG ACAGCGGTGT 002240
002241 CTGGATGGAC CAGCAGAGGG CACTCTCACC CACGGGGAAA ATCGTGCGCC CGGCCTCGTC CACCGCCAGA AGACGCCGC
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