Difference between revisions of "NONHSAT099989"

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sequence = <dnaseq>TTGGACGCCCTTCCTCGGGGCAGCGGGGTGCAGGGAGAGTTCTTCTGGCTGTGAGTCCCGGAGTCCCCGACCCTGGCACCCCTTCAGCAAGGTTCTCAGGCACATCTGCCGGGGGCGCTGAGGGGACCTGAGATGGACGGGCCGGGAGGGAGGCTGAGGGCGAGGGGGtgcattggtctgcttgggccgctgtaacaaaatgccacagcctggatgagtgactgacattgcttccccaccgttctggaggctggaggcccgagatcgaggtCCCTGACACTATTTCAGTGATGCCAGAGCCCAGGAGGAGTCGACCAAGCCCCAGCGTGGCCATAAGCACCTTCGCAGGACCACGGAGTCGCTGCAGGTGTTCAGCCCTGTTGAGAGTGGGAGTCGGTGTCGATGGTCACAGCTCAGTAACTCATCGTCACCAGCGAGTACCACAGAGCAGACACAACTGCACTTCTCTGTAGAGCCTCCAGTCGATACTGAGAGCCACTGGGGCGTCTGACACCCAAGGGTGCAGACATTCACTCCAAGTCCAGAGACCGCGCCCTTTCTAAGGCCCTGTCTCACAGTCGCCCCGTGCTCATTGTGCCGGATGTTTCCACAGCCACAGAGACGGTGCGTGAAGGTGAGGTGCAGCCTAGTGCATATGACTGACAGAAACGTGAAGCCACAGTGGACGCCTGGATGAGACACAGATCACCTTCCAAATCTGAGTGTGGCCTTGGGACCAACCAGGCAGCCAGGGAGAAGGCAGAGACCAGAGGGAACCCAGGTGCcctcaatcccagcctcctctatcccagcctcccaatcccagcctccccaatcccagcctcctaatcccagcctcctccatcccaggacccccactcccagcctcccgatcccagcTTCTCTGATCCCAGCCTCCCCTAAAACCCAGACTCTATGAATCCCAGcctctgaggtgggaactgttagtaaccccactccatggacaagaaagctggggcctggcgaggctaaCAGACTATCCTGATGGTGTGAGGGAGGGATCGGCCTCTGAGGGCTGCTTCCACCCATCTCACCAGTGGCTGCAGGCTCCAGGCGCCACTTTCCTTGAGTCTATGTTCTTTCCAAGCATCCTGCAGCTCCAGAAGCTCTGGAGCCGCCAGCACTGAGAGAAGCGATGGAGCTGCATGCAGGGAAACTTTGTTGACAGCGGTGTCTGGATGGACCAGCAGAGGGCACTCTCACCCACGGGGAAAATCGTGCGCCCGGCCTCGTCCACCGCCAGAAGACGCCGC</dnaseq>|
 
sequence = <dnaseq>TTGGACGCCCTTCCTCGGGGCAGCGGGGTGCAGGGAGAGTTCTTCTGGCTGTGAGTCCCGGAGTCCCCGACCCTGGCACCCCTTCAGCAAGGTTCTCAGGCACATCTGCCGGGGGCGCTGAGGGGACCTGAGATGGACGGGCCGGGAGGGAGGCTGAGGGCGAGGGGGtgcattggtctgcttgggccgctgtaacaaaatgccacagcctggatgagtgactgacattgcttccccaccgttctggaggctggaggcccgagatcgaggtCCCTGACACTATTTCAGTGATGCCAGAGCCCAGGAGGAGTCGACCAAGCCCCAGCGTGGCCATAAGCACCTTCGCAGGACCACGGAGTCGCTGCAGGTGTTCAGCCCTGTTGAGAGTGGGAGTCGGTGTCGATGGTCACAGCTCAGTAACTCATCGTCACCAGCGAGTACCACAGAGCAGACACAACTGCACTTCTCTGTAGAGCCTCCAGTCGATACTGAGAGCCACTGGGGCGTCTGACACCCAAGGGTGCAGACATTCACTCCAAGTCCAGAGACCGCGCCCTTTCTAAGGCCCTGTCTCACAGTCGCCCCGTGCTCATTGTGCCGGATGTTTCCACAGCCACAGAGACGGTGCGTGAAGGTGAGGTGCAGCCTAGTGCATATGACTGACAGAAACGTGAAGCCACAGTGGACGCCTGGATGAGACACAGATCACCTTCCAAATCTGAGTGTGGCCTTGGGACCAACCAGGCAGCCAGGGAGAAGGCAGAGACCAGAGGGAACCCAGGTGCcctcaatcccagcctcctctatcccagcctcccaatcccagcctccccaatcccagcctcctaatcccagcctcctccatcccaggacccccactcccagcctcccgatcccagcTTCTCTGATCCCAGCCTCCCCTAAAACCCAGACTCTATGAATCCCAGcctctgaggtgggaactgttagtaaccccactccatggacaagaaagctggggcctggcgaggctaaCAGACTATCCTGATGGTGTGAGGGAGGGATCGGCCTCTGAGGGCTGCTTCCACCCATCTCACCAGTGGCTGCAGGCTCCAGGCGCCACTTTCCTTGAGTCTATGTTCTTTCCAAGCATCCTGCAGCTCCAGAAGCTCTGGAGCCGCCAGCACTGAGAGAAGCGATGGAGCTGCATGCAGGGAAACTTTGTTGACAGCGGTGTCTGGATGGACCAGCAGAGGGCACTCTCACCCACGGGGAAAATCGTGCGCCCGGCCTCGTCCACCGCCAGAAGACGCCGC</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:NONHSAG039664]][[Category:Transcripts]]
+
[[Category:Intergenic]][[Category:NONHSAG039664]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 01:13, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT099989

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1295 nt

Genomic location

chr5-:1174645..1182915

Exon number

4

Exons

1174645..1174745,1175244..1175803,1176076..1176551,1182758..1182915

Genome context

Sequence
000001 TTGGACGCCC TTCCTCGGGG CAGCGGGGTG CAGGGAGAGT TCTTCTGGCT GTGAGTCCCG GAGTCCCCGA CCCTGGCACC 000080
000081 CCTTCAGCAA GGTTCTCAGG CACATCTGCC GGGGGCGCTG AGGGGACCTG AGATGGACGG GCCGGGAGGG AGGCTGAGGG 000160
000161 CGAGGGGGtg cattggtctg cttgggccgc tgtaacaaaa tgccacagcc tggatgagtg actgacattg cttccccacc 000240
000241 gttctggagg ctggaggccc gagatcgagg tCCCTGACAC TATTTCAGTG ATGCCAGAGC CCAGGAGGAG TCGACCAAGC 000320
000321 CCCAGCGTGG CCATAAGCAC CTTCGCAGGA CCACGGAGTC GCTGCAGGTG TTCAGCCCTG TTGAGAGTGG GAGTCGGTGT 000400
000401 CGATGGTCAC AGCTCAGTAA CTCATCGTCA CCAGCGAGTA CCACAGAGCA GACACAACTG CACTTCTCTG TAGAGCCTCC 000480
000481 AGTCGATACT GAGAGCCACT GGGGCGTCTG ACACCCAAGG GTGCAGACAT TCACTCCAAG TCCAGAGACC GCGCCCTTTC 000560
000561 TAAGGCCCTG TCTCACAGTC GCCCCGTGCT CATTGTGCCG GATGTTTCCA CAGCCACAGA GACGGTGCGT GAAGGTGAGG 000640
000641 TGCAGCCTAG TGCATATGAC TGACAGAAAC GTGAAGCCAC AGTGGACGCC TGGATGAGAC ACAGATCACC TTCCAAATCT 000720
000721 GAGTGTGGCC TTGGGACCAA CCAGGCAGCC AGGGAGAAGG CAGAGACCAG AGGGAACCCA GGTGCcctca atcccagcct 000800
000801 cctctatccc agcctcccaa tcccagcctc cccaatccca gcctcctaat cccagcctcc tccatcccag gacccccact 000880
000881 cccagcctcc cgatcccagc TTCTCTGATC CCAGCCTCCC CTAAAACCCA GACTCTATGA ATCCCAGcct ctgaggtggg 000960
000961 aactgttagt aaccccactc catggacaag aaagctgggg cctggcgagg ctaaCAGACT ATCCTGATGG TGTGAGGGAG 001040
001041 GGATCGGCCT CTGAGGGCTG CTTCCACCCA TCTCACCAGT GGCTGCAGGC TCCAGGCGCC ACTTTCCTTG AGTCTATGTT 001120
001121 CTTTCCAAGC ATCCTGCAGC TCCAGAAGCT CTGGAGCCGC CAGCACTGAG AGAAGCGATG GAGCTGCATG CAGGGAAACT 001200
001201 TTGTTGACAG CGGTGTCTGG ATGGACCAGC AGAGGGCACT CTCACCCACG GGGAAAATCG TGCGCCCGGC CTCGTCCACC 001280
001281 GCCAGAAGAC GCCGC
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