Difference between revisions of "NONHSAT058687"
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sequence = <dnaseq>ACCTGAGCAAGGAGAGGTTCTCTGTGCTTAGTGTCAAATCAACAGTGCCTTGACATCTTTCCACACTGCTTTGGAACTTGCAGTAGACCAGAGAGAAATTCAACATGTCTGTCTGTATGAAATTGGTAAATGTGAAATGTCTGTCCAGCCTCTTGTTAAGAAGTAGTATTAATGCAGTATTTTAGCTTTCATGCCATTCAGTGTGTGTCTACAAAATGCTTGGTGCCTTCTGTAGTAAGAAGGACTTCAGTTATTCCCGTAGCACATGCAATGATACTTCTCTCTGATTCTCATTACGTTTTTATAACATTTTTTCTTTACAGCATTTTGATTTTTTAGGATAATAGGTGATGTTAAATGAATTGATTAAATGACCAGAAATACCTTATTGGACTGCATTAGAATTCAAAGCTCTTTGTTCCTCCTTCCCACTAATGTTTACTTGAGAAGAAAAATAggagacaggagatagttggactgaagtcccagtgtttttcaccaactagctct</dnaseq>| | sequence = <dnaseq>ACCTGAGCAAGGAGAGGTTCTCTGTGCTTAGTGTCAAATCAACAGTGCCTTGACATCTTTCCACACTGCTTTGGAACTTGCAGTAGACCAGAGAGAAATTCAACATGTCTGTCTGTATGAAATTGGTAAATGTGAAATGTCTGTCCAGCCTCTTGTTAAGAAGTAGTATTAATGCAGTATTTTAGCTTTCATGCCATTCAGTGTGTGTCTACAAAATGCTTGGTGCCTTCTGTAGTAAGAAGGACTTCAGTTATTCCCGTAGCACATGCAATGATACTTCTCTCTGATTCTCATTACGTTTTTATAACATTTTTTCTTTACAGCATTTTGATTTTTTAGGATAATAGGTGATGTTAAATGAATTGATTAAATGACCAGAAATACCTTATTGGACTGCATTAGAATTCAAAGCTCTTTGTTCCTCCTTCCCACTAATGTTTACTTGAGAAGAAAAATAggagacaggagatagttggactgaagtcccagtgtttttcaccaactagctct</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG023558]][[Category:Transcripts]] | + | [[Category:Sense]][[Category:NONHSAG023558]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 22:35, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT058687 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
510 nt |
| Genomic location |
chr18+:21694304..21694996 |
| Exon number |
2 |
| Exons |
21694304..21694334,21694518..21694996 |
| Genome context |
|
| Sequence |
000001 ACCTGAGCAA GGAGAGGTTC TCTGTGCTTA GTGTCAAATC AACAGTGCCT TGACATCTTT CCACACTGCT TTGGAACTTG 000080
000081 CAGTAGACCA GAGAGAAATT CAACATGTCT GTCTGTATGA AATTGGTAAA TGTGAAATGT CTGTCCAGCC TCTTGTTAAG 000160 000161 AAGTAGTATT AATGCAGTAT TTTAGCTTTC ATGCCATTCA GTGTGTGTCT ACAAAATGCT TGGTGCCTTC TGTAGTAAGA 000240 000241 AGGACTTCAG TTATTCCCGT AGCACATGCA ATGATACTTC TCTCTGATTC TCATTACGTT TTTATAACAT TTTTTCTTTA 000320 000321 CAGCATTTTG ATTTTTTAGG ATAATAGGTG ATGTTAAATG AATTGATTAA ATGACCAGAA ATACCTTATT GGACTGCATT 000400 000401 AGAATTCAAA GCTCTTTGTT CCTCCTTCCC ACTAATGTTT ACTTGAGAAG AAAAATAgga gacaggagat agttggactg 000480 000481 aagtcccagt gtttttcacc aactagctct |
Predicted Small Protein
| Name | NONHSAT058687_smProtein_104:184 |
| Length | 27 |
| Molecular weight | 2856.5364 |
| Aromaticity | 0.0384615384615 |
| Instability index | 81.2115384615 |
| Isoelectric point | 9.50006103516 |
| Runs | 5 |
| Runs residual | 0.0169946332737 |
| Runs probability | 0.0102455396573 |
| Amino acid sequence | MSVCMKLVNVKCLSSLLLRSSINAVF |
| Secondary structure | LLEEEELLLHHHHHHHHHHHHHHHLL |
| PRMN | - |
| PiMo | - |
