Difference between revisions of "NONHSAT056682"
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sequence = <dnaseq>TGTGAGACTGTGACCCTGTGTCATGTGCACACGTGGCTGTGTAGGAGTGTGGCATGTGTGTGACTGGGACCCtgtgtcatgtgtacacgtggctgtgtaggagtgtggcatgtgtgtgactgggaccctgtgtcatgtgtacacgtggctgtgtaggagtgtggtgtgtgtgtgactgggaccctgtgtcatgtgcacacgtggctgtgtaggagtgtggcgtgtgtgtgACTGGGACCCTGTGTCATGTGCACATGTGGCTGTGTAGGAGTGTGGTGTGTGAGACTGCGACCCTGTGTCATGTGCACACATGGCTGTGTAGGCGTGTGTGGGTGCATGtgtgtgcatgtatgcatcaagacttcacagggacactttaaaatagcaacagtgggccgggcacggtagctcacgcctgtaatctcagcacgttgggaggccaaggcgggtggatcacgaggtcaggagttcg</dnaseq>| | sequence = <dnaseq>TGTGAGACTGTGACCCTGTGTCATGTGCACACGTGGCTGTGTAGGAGTGTGGCATGTGTGTGACTGGGACCCtgtgtcatgtgtacacgtggctgtgtaggagtgtggcatgtgtgtgactgggaccctgtgtcatgtgtacacgtggctgtgtaggagtgtggtgtgtgtgtgactgggaccctgtgtcatgtgcacacgtggctgtgtaggagtgtggcgtgtgtgtgACTGGGACCCTGTGTCATGTGCACATGTGGCTGTGTAGGAGTGTGGTGTGTGAGACTGCGACCCTGTGTCATGTGCACACATGGCTGTGTAGGCGTGTGTGGGTGCATGtgtgtgcatgtatgcatcaagacttcacagggacactttaaaatagcaacagtgggccgggcacggtagctcacgcctgtaatctcagcacgttgggaggccaaggcgggtggatcacgaggtcaggagttcg</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:NONHSAG023089]][[Category:Transcripts]] | + | [[Category:Intergenic]][[Category:NONHSAG023089]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 22:30, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT056682 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
472 nt |
| Genomic location |
chr17+:80339317..80339840 |
| Exon number |
2 |
| Exons |
80339317..80339348,80339401..80339840 |
| Genome context |
|
| Sequence |
000001 TGTGAGACTG TGACCCTGTG TCATGTGCAC ACGTGGCTGT GTAGGAGTGT GGCATGTGTG TGACTGGGAC CCtgtgtcat 000080
000081 gtgtacacgt ggctgtgtag gagtgtggca tgtgtgtgac tgggaccctg tgtcatgtgt acacgtggct gtgtaggagt 000160 000161 gtggtgtgtg tgtgactggg accctgtgtc atgtgcacac gtggctgtgt aggagtgtgg cgtgtgtgtg ACTGGGACCC 000240 000241 TGTGTCATGT GCACATGTGG CTGTGTAGGA GTGTGGTGTG TGAGACTGCG ACCCTGTGTC ATGTGCACAC ATGGCTGTGT 000320 000321 AGGCGTGTGT GGGTGCATGt gtgtgcatgt atgcatcaag acttcacagg gacactttaa aatagcaaca gtgggccggg 000400 000401 cacggtagct cacgcctgta atctcagcac gttgggaggc caaggcgggt ggatcacgag gtcaggagtt cg |
Predicted Small Protein
| Name | NONHSAT056682_smProtein_254:379 |
| Length | 42 |
| Molecular weight | 4833.7334 |
| Aromaticity | 0.0975609756098 |
| Instability index | 72.1951219512 |
| Isoelectric point | 7.65997314453 |
| Runs | 9 |
| Runs residual | 0.0435433188688 |
| Runs probability | 0.0466544976348 |
| Amino acid sequence | MWLCRSVVCETATLCHVHTWLCRRVWVHVCACMHQDFTGTL |
| Secondary structure | LEEEEEEEEELLLEEELLHHHHLLEEEEEEEEEELLLLLLL |
| PRMN | - |
| PiMo | - |
