Difference between revisions of "NONHSAT026019"
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sequence = <dnaseq>AACAAAGGAACATTCTTCCAGCTGAACTgcacactagcagggacttcacctacttcatctgcagttctcacaacagccatgcaacatttctcatcctccttattcagataaagaaggcagcgggttaaggggacggaagaaaatgacggggcaaaaagcacctacttgctgtatttgaagaaggttaccagatacttccaccttgcgacattggccagaaatactgtttatggaaacacctcattgcaagggagatgtggtcttaatgctggatggccatgtgctttgttaaaaatgaagaacatgagaacagctgtcgggacagctagcagtctgccacCAAGATCTTGGAATTTGACCCTTGCCCTCCCAACCCTACctcaaacttagaacatctgcacccacttaatggacatctgttacacacttgagccaacgaccctaaagaaagttaaaacagcattcatcacagtttgaaaataaagacaaaggAATAAAAGCCAGGGATCCATCTTTGTCCGGATACACGCCCCGTGGCAGGTGCTGGCCAGAGAGGCAGAATTCTTGAAGATCAAAGTTCCTACCA</dnaseq>| | sequence = <dnaseq>AACAAAGGAACATTCTTCCAGCTGAACTgcacactagcagggacttcacctacttcatctgcagttctcacaacagccatgcaacatttctcatcctccttattcagataaagaaggcagcgggttaaggggacggaagaaaatgacggggcaaaaagcacctacttgctgtatttgaagaaggttaccagatacttccaccttgcgacattggccagaaatactgtttatggaaacacctcattgcaagggagatgtggtcttaatgctggatggccatgtgctttgttaaaaatgaagaacatgagaacagctgtcgggacagctagcagtctgccacCAAGATCTTGGAATTTGACCCTTGCCCTCCCAACCCTACctcaaacttagaacatctgcacccacttaatggacatctgttacacacttgagccaacgaccctaaagaaagttaaaacagcattcatcacagtttgaaaataaagacaaaggAATAAAAGCCAGGGATCCATCTTTGTCCGGATACACGCCCCGTGGCAGGTGCTGGCCAGAGAGGCAGAATTCTTGAAGATCAAAGTTCCTACCA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG010273]][[Category:Transcripts]] | + | [[Category:Sense]][[Category:NONHSAG010273]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 20:51, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT026019 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
586 nt |
| Genomic location |
chr12-:5963214..5990972 |
| Exon number |
4 |
| Exons |
5963214..5963307,5965424..5965799,5967777..5967864,5990945..5990972 |
| Genome context |
|
| Sequence |
000001 AACAAAGGAA CATTCTTCCA GCTGAACTgc acactagcag ggacttcacc tacttcatct gcagttctca caacagccat 000080
000081 gcaacatttc tcatcctcct tattcagata aagaaggcag cgggttaagg ggacggaaga aaatgacggg gcaaaaagca 000160 000161 cctacttgct gtatttgaag aaggttacca gatacttcca ccttgcgaca ttggccagaa atactgttta tggaaacacc 000240 000241 tcattgcaag ggagatgtgg tcttaatgct ggatggccat gtgctttgtt aaaaatgaag aacatgagaa cagctgtcgg 000320 000321 gacagctagc agtctgccac CAAGATCTTG GAATTTGACC CTTGCCCTCC CAACCCTACc tcaaacttag aacatctgca 000400 000401 cccacttaat ggacatctgt tacacacttg agccaacgac cctaaagaaa gttaaaacag cattcatcac agtttgaaaa 000480 000481 taaagacaaa ggAATAAAAG CCAGGGATCC ATCTTTGTCC GGATACACGC CCCGTGGCAG GTGCTGGCCA GAGAGGCAGA 000560 000561 ATTCTTGAAG ATCAAAGTTC CTACCA |
Predicted Small Protein
| Name | NONHSAT026019_smProtein_272:328 |
| Length | 19 |
| Molecular weight | 2130.3623 |
| Aromaticity | 0.0555555555556 |
| Instability index | 57.4333333333 |
| Isoelectric point | 4.83099365234 |
| Runs | 5 |
| Runs residual | 0.0116959064327 |
| Runs probability | 0.0144497438615 |
| Amino acid sequence | MAMCFVKNEEHENSCRDS |
| Secondary structure | LLEEEELLLHHHLLLLLL |
| PRMN | - |
| PiMo | - |
