Difference between revisions of "NONHSAT012504"
| Line 42: | Line 42: | ||
sequence = <dnaseq>TCCTGTGGTTAATGATATGAGAAACAGAATGCCTCTCCAGAAACCTTTTCACATCCCAGATTCAGAGTTCCTGAGGCAATGGAATTGGCTGCTTGTTGCTCAATTGAATTGAGGCTCTACATTAGGATAATGAAAAGCTGTAGGCAGTTAGGGAGCAATTGAAAGCCACTTGTGAAGGCCTGAGGGCCTCCAGGAATGGGGCCCATATTCACTCCATTCAGTGTAGAAAAAGCAGAAGACCAAACTATGGATTTAATAGGCTTGCCTAGCTTCAAAGATGATTATCATTACACAAAGATCAGAGCACTGGTTGGGAAAACATGGAGCTCTTGTGCACGGGATGGGGACATTTGGGTGGATGCCTCCAAATATTTTGAGCTCTCAAACTCTTCTAAGCCCTCAGAGC</dnaseq>| | sequence = <dnaseq>TCCTGTGGTTAATGATATGAGAAACAGAATGCCTCTCCAGAAACCTTTTCACATCCCAGATTCAGAGTTCCTGAGGCAATGGAATTGGCTGCTTGTTGCTCAATTGAATTGAGGCTCTACATTAGGATAATGAAAAGCTGTAGGCAGTTAGGGAGCAATTGAAAGCCACTTGTGAAGGCCTGAGGGCCTCCAGGAATGGGGCCCATATTCACTCCATTCAGTGTAGAAAAAGCAGAAGACCAAACTATGGATTTAATAGGCTTGCCTAGCTTCAAAGATGATTATCATTACACAAAGATCAGAGCACTGGTTGGGAAAACATGGAGCTCTTGTGCACGGGATGGGGACATTTGGGTGGATGCCTCCAAATATTTTGAGCTCTCAAACTCTTCTAAGCCCTCAGAGC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:Transcripts]] | + | [[Category:Intergenic]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 20:06, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT012504 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
406 nt |
| Genomic location |
chr10+:29135882..29137154 |
| Exon number |
2 |
| Exons |
29135882..29135957,29136825..29137154 |
| Genome context |
|
| Sequence |
000001 TCCTGTGGTT AATGATATGA GAAACAGAAT GCCTCTCCAG AAACCTTTTC ACATCCCAGA TTCAGAGTTC CTGAGGCAAT 000080
000081 GGAATTGGCT GCTTGTTGCT CAATTGAATT GAGGCTCTAC ATTAGGATAA TGAAAAGCTG TAGGCAGTTA GGGAGCAATT 000160 000161 GAAAGCCACT TGTGAAGGCC TGAGGGCCTC CAGGAATGGG GCCCATATTC ACTCCATTCA GTGTAGAAAA AGCAGAAGAC 000240 000241 CAAACTATGG ATTTAATAGG CTTGCCTAGC TTCAAAGATG ATTATCATTA CACAAAGATC AGAGCACTGG TTGGGAAAAC 000320 000321 ATGGAGCTCT TGTGCACGGG ATGGGGACAT TTGGGTGGAT GCCTCCAAAT ATTTTGAGCT CTCAAACTCT TCTAAGCCCT 000400 000401 CAGAGC |
Predicted Small Protein
| Name | NONHSAT012504_smProtein_320:376 |
| Length | 19 |
| Molecular weight | 1978.3604 |
| Aromaticity | 0.111111111111 |
| Instability index | 59.6 |
| Isoelectric point | 5.22210693359 |
| Runs | 5 |
| Runs residual | 0.0116959064327 |
| Runs probability | 0.041688747571 |
| Amino acid sequence | MELLCTGWGHLGGCLQIF |
| Secondary structure | LEEEELLLLHHHHHHHLL |
| PRMN | - |
| PiMo | - |
