Difference between revisions of "NONHSAT068260"
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sequence = <dnaseq>AGGGCGGGACTTGTGGCGTCTTCGCAGCGGTCATTTTGGCTGCCCTCCCGGAGGTCCGTTCTGTCTGTCAGCCGCTTTGGTACGCTGCATCGGGATCGAAGTGACGGACCGTGAAGGCGCGAGAGTCAGGTCTGAGGGTCGGGGGCAGAGCCGCCCGCGAGGCCGGCCTGGGGATAGCGATGCTCGGGTTCCCCCCGGGTCGCCCGCAGCTCCCGGTCCAGCTCCGCCCACAGACTCGGATGGCGACCGCACTGAGGGACCCGGCTTCGGTTCCCATAGCTACAGAGGTGCTTTTCAAACTTACACAGGTAAGTGGAGGTATCTCAGCCCCTCACTGGTCTGGAATGTCCCTCCACCCTCCCCAGACAGATATTTTCTTTAGATTTGTGGTGTCATGGGACTCACCTACCATTCTCTCAGCGTTTGGTTTGGGAACCCTGGAGAATCCCTGAGCTAAGGGCCCTGAGTCCAGGCCAATGTTTCCATTTGGAGCAGCCAATGGAAAGATGGGTGAAAATTTATGATAGAAA</dnaseq>| | sequence = <dnaseq>AGGGCGGGACTTGTGGCGTCTTCGCAGCGGTCATTTTGGCTGCCCTCCCGGAGGTCCGTTCTGTCTGTCAGCCGCTTTGGTACGCTGCATCGGGATCGAAGTGACGGACCGTGAAGGCGCGAGAGTCAGGTCTGAGGGTCGGGGGCAGAGCCGCCCGCGAGGCCGGCCTGGGGATAGCGATGCTCGGGTTCCCCCCGGGTCGCCCGCAGCTCCCGGTCCAGCTCCGCCCACAGACTCGGATGGCGACCGCACTGAGGGACCCGGCTTCGGTTCCCATAGCTACAGAGGTGCTTTTCAAACTTACACAGGTAAGTGGAGGTATCTCAGCCCCTCACTGGTCTGGAATGTCCCTCCACCCTCCCCAGACAGATATTTTCTTTAGATTTGTGGTGTCATGGGACTCACCTACCATTCTCTCAGCGTTTGGTTTGGGAACCCTGGAGAATCCCTGAGCTAAGGGCCCTGAGTCCAGGCCAATGTTTCCATTTGGAGCAGCCAATGGAAAGATGGGTGAAAATTTATGATAGAAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG026677]][[Category:Transcripts]] | + | [[Category:Sense]][[Category:NONHSAG026677]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 23:08, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT068260 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
530 nt |
| Genomic location |
chr19+:58144536..58145651 |
| Exon number |
2 |
| Exons |
58144536..58144804,58145391..58145651 |
| Genome context |
|
| Sequence |
000001 AGGGCGGGAC TTGTGGCGTC TTCGCAGCGG TCATTTTGGC TGCCCTCCCG GAGGTCCGTT CTGTCTGTCA GCCGCTTTGG 000080
000081 TACGCTGCAT CGGGATCGAA GTGACGGACC GTGAAGGCGC GAGAGTCAGG TCTGAGGGTC GGGGGCAGAG CCGCCCGCGA 000160 000161 GGCCGGCCTG GGGATAGCGA TGCTCGGGTT CCCCCCGGGT CGCCCGCAGC TCCCGGTCCA GCTCCGCCCA CAGACTCGGA 000240 000241 TGGCGACCGC ACTGAGGGAC CCGGCTTCGG TTCCCATAGC TACAGAGGTG CTTTTCAAAC TTACACAGGT AAGTGGAGGT 000320 000321 ATCTCAGCCC CTCACTGGTC TGGAATGTCC CTCCACCCTC CCCAGACAGA TATTTTCTTT AGATTTGTGG TGTCATGGGA 000400 000401 CTCACCTACC ATTCTCTCAG CGTTTGGTTT GGGAACCCTG GAGAATCCCT GAGCTAAGGG CCCTGAGTCC AGGCCAATGT 000480 000481 TTCCATTTGG AGCAGCCAAT GGAAAGATGG GTGAAAATTT ATGATAGAAA |
Predicted Small Protein
| Name | NONHSAT068260_smProtein_179:451 |
| Length | 91 |
| Molecular weight | 9783.2311 |
| Aromaticity | 0.0888888888889 |
| Instability index | 53.78 |
| Isoelectric point | 8.53057861328 |
| Runs | 10 |
| Runs residual | 0.0287477954145 |
| Runs probability | 0.0491255961844 |
| Amino acid sequence | MLGFPPGRPQLPVQLRPQTRMATALRDPASVPIATEVLFKLTQVSGGISAPHWSGMSLHP PQTDIFFRFVVSWDSPTILSAFGLGTLENP |
| Secondary structure | LLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLLHHHHHHHHHHELLLLLLLLLLLLLLLLL LLLLEEEEEEEELLLLLLEELLLLLLLLLL |
| PRMN | - |
| PiMo | - |
