Difference between revisions of "NONHSAT027634"
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sequence = <dnaseq>GCGGCCGCGGCGGCCAGACAGTCAAGAGCCTGCGGATCCAGGAGCAGGTGCAGCAGACCCTCGCCCGGAAGGGCCGCAGCTCCGTGGGCAACGGTCCAGTGCTAAACTGAAACCAAATCAGCTTCCCCTGCGTAGGAGACACAGGAGGCATATTAGATATTCTTTCTTATCCTCTGAGAATGGCCAGCTAGGAAGAGAGCAAGCAGATACAACTCTTCCATAAATGGAGGGAATGGAGCCATGAACAGAAGAAAAGGGAATGTTGCTGAGCATCTACTATGTGCCTATTCCAGAATCTTCATTATATTCTTGAAACAATTGCTGAGATAGATATGAGAATCCATCTCACATATGAAGTATGTGTCTGTCAGCAATGGTTGGAAATTTAATCCCAACTCCACACATAATCTGTTCTTTCTACAAAGTAATGCATCACCTGTGTGATGAATTCAGCAAGCATCAAATGAGTATGTTCTTCATGCCGGGCGCTGTGCAGGTGCTGAATTAAACACAAAGACTCTGCTTGCTTTAAAGCAAAAAGTTTGAAGAAGGAAGCCAACCGCTAGAAAAATACATTACCAAATAAAAA</dnaseq>| | sequence = <dnaseq>GCGGCCGCGGCGGCCAGACAGTCAAGAGCCTGCGGATCCAGGAGCAGGTGCAGCAGACCCTCGCCCGGAAGGGCCGCAGCTCCGTGGGCAACGGTCCAGTGCTAAACTGAAACCAAATCAGCTTCCCCTGCGTAGGAGACACAGGAGGCATATTAGATATTCTTTCTTATCCTCTGAGAATGGCCAGCTAGGAAGAGAGCAAGCAGATACAACTCTTCCATAAATGGAGGGAATGGAGCCATGAACAGAAGAAAAGGGAATGTTGCTGAGCATCTACTATGTGCCTATTCCAGAATCTTCATTATATTCTTGAAACAATTGCTGAGATAGATATGAGAATCCATCTCACATATGAAGTATGTGTCTGTCAGCAATGGTTGGAAATTTAATCCCAACTCCACACATAATCTGTTCTTTCTACAAAGTAATGCATCACCTGTGTGATGAATTCAGCAAGCATCAAATGAGTATGTTCTTCATGCCGGGCGCTGTGCAGGTGCTGAATTAAACACAAAGACTCTGCTTGCTTTAAAGCAAAAAGTTTGAAGAAGGAAGCCAACCGCTAGAAAAATACATTACCAAATAAAAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG010859]][[Category:Transcripts]] | + | [[Category:Sense]][[Category:NONHSAG010859]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 20:57, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT027634 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
589 nt |
| Genomic location |
chr12-:33047217..33049535 |
| Exon number |
2 |
| Exons |
33047217..33047712,33049443..33049535 |
| Genome context |
|
| Sequence |
000001 GCGGCCGCGG CGGCCAGACA GTCAAGAGCC TGCGGATCCA GGAGCAGGTG CAGCAGACCC TCGCCCGGAA GGGCCGCAGC 000080
000081 TCCGTGGGCA ACGGTCCAGT GCTAAACTGA AACCAAATCA GCTTCCCCTG CGTAGGAGAC ACAGGAGGCA TATTAGATAT 000160 000161 TCTTTCTTAT CCTCTGAGAA TGGCCAGCTA GGAAGAGAGC AAGCAGATAC AACTCTTCCA TAAATGGAGG GAATGGAGCC 000240 000241 ATGAACAGAA GAAAAGGGAA TGTTGCTGAG CATCTACTAT GTGCCTATTC CAGAATCTTC ATTATATTCT TGAAACAATT 000320 000321 GCTGAGATAG ATATGAGAAT CCATCTCACA TATGAAGTAT GTGTCTGTCA GCAATGGTTG GAAATTTAAT CCCAACTCCA 000400 000401 CACATAATCT GTTCTTTCTA CAAAGTAATG CATCACCTGT GTGATGAATT CAGCAAGCAT CAAATGAGTA TGTTCTTCAT 000480 000481 GCCGGGCGCT GTGCAGGTGC TGAATTAAAC ACAAAGACTC TGCTTGCTTT AAAGCAAAAA GTTTGAAGAA GGAAGCCAAC 000560 000561 CGCTAGAAAA ATACATTACC AAATAAAAA |
Predicted Small Protein
| Name | NONHSAT027634_smProtein_278:388 |
| Length | 37 |
| Molecular weight | 4413.1877 |
| Aromaticity | 0.111111111111 |
| Instability index | 47.1555555556 |
| Isoelectric point | 4.55877685547 |
| Runs | 7 |
| Runs residual | 0.013986013986 |
| Runs probability | 0.00844121432357 |
| Amino acid sequence | MCLFQNLHYILETIAEIDMRIHLTYEVCVCQQWLEI |
| Secondary structure | LLLHHHHHHHHHHHHHHHHHHHLLEEEEEEHHHEEL |
| PRMN | - |
| PiMo | - |
