Difference between revisions of "ENST00000453100.1"

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==Annotated Information==
 
==Annotated Information==
 
===Name===
 
===Name===
LINC00570
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===Characteristics===
 
===Characteristics===
Multiple 2-4 exon isoforms with variation in splicing and TSSs. Isoforms between 380 nt and 1.3kb. Intergenic between ROCK2 and E2F6. In-vitro translation showed no sign of protein product.
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===Function===
 
===Function===
LINC00570 expression appears to stimulate ROCK2 gene expression (in HeLa cells).
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===Expression===
 
===Expression===
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==References==
 
==References==
Please input cited references here.
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[http://www.lncrnadb.org/LINC00570/ Annotation originally sourced from lncRNAdb.]
  
 
{{basic|
 
{{basic|

Latest revision as of 11:27, 30 June 2016

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Annotated Information

Name

Characteristics

Function

Expression

Expressed in HeLa cells.

Conservation

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Misc

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Transcriptomic Nomeclature

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Regulation

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

Annotation originally sourced from lncRNAdb.

Basic Information

Transcript ID

ENST00000453100.1

Source

Gencode19

Same with

lnc-GREB1-4:3,NONHSAT069166

Classification

intergenic

Length

399 nt

Genomic location

chr2+:11539180..11542384

Exon number

2

Exons

11539180..11539344,11542151..11542384

Genome context

Sequence
000001 ACTGTGCCCT GGATGTGAGA CGTGGAATCA AGGAGATTAT TTTGGAGCTT TAAGACGTAA TGGCACCCTG CTGGGTTTCA 000080
000081 GACTTGAGTG GAGCCTGCAG CCTTTCTTTC GGCCGGTTTC TCCCTTTTGG AACGGGAGTA TTTACCCAAT GCCTGTACCC 000160
000161 CCATGGTGGC AGCTGAGGCT TACTACCCCA GGAAAGGGAT GCCACCAGAG AAGGCAGACA ACCAAGATGG CGACTCTCAA 000240
000241 TTTTTGAGCT CCTAATTTTC TCATGTCAGA CATAAGAAAA AAAAATATTT TTTAAAGAAA AAGCTTTAGG TTGCAAAAAT 000320
000321 CTAGGCCTTT CAACTTTAAA ATCCTATTCT TGCAAGCCTT GGAGAATAAA GCTTATGCAT AAACAGTAGA TTTGGAAAC
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