Difference between revisions of "MIR200CHG"
Guangyu Wang (talk | contribs) (Created page with "==Annotated Information== ===Approved Symbol=== MIR200CHG ===Approved Name=== MIR200C and MIR141 host gene ===Previous Symbols=== _ ===Synonyms=== U47924.27 ===Chromosome=== 1...") |
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==Annotated Information== | ==Annotated Information== | ||
| − | === | + | ===Name=== |
| − | MIR200CHG | + | MIR200CHG:MIR200C and MIR141 host gene |
| − | + | ||
| − | MIR200C and MIR141 host gene | + | U47924.27 <ref name="ref1" /> |
| − | === | + | |
| − | + | ===Characteristics=== | |
| − | === | + | U47924.27, which is located on chromosome 12, is a lincRNA (long intergenic non-coding RNA) <ref name="ref1" />. |
| − | U47924.27 | + | |
| − | === | + | ===Function=== |
| − | + | Low expression of U47924.27 is significantly associated with decreased survival of patients with melanoma <ref name="ref1" />. | |
| − | === | + | |
| − | + | ===Diseases=== | |
| − | === | + | Melanoma <ref name="ref1" /> |
| − | + | ||
| − | == | + | ===Expression=== |
| − | + | U47924.27 is down-regulated in primary melanoma and metastatic melanoma <ref name="ref1" />. | |
| − | == | + | |
| − | + | ===Sequence=== | |
| + | >NR_135032.1 Homo sapiens MIR200C and MIR141 host gene (MIR200CHG), long non-coding RNA | ||
| + | <dnaseq>AAGAGCGGAGGCCAGGGCGGGCTCTAGGCCGTGGAATCTGGGGCCTTAAAGCCCCTTCGTCTCCCCAGCA | ||
| + | CCCACTCTCTGGGGGCAGGTGGGCCCGGTGACAGTAACCTTCAGGGAGCCCTGAAGACCATGGAGGACTA | ||
| + | CTGACCAACAACCTCTGACCTTCACCCCTCTGGATGGGGGACGAATCACTAGGCAAAGGGGAACAATGGG | ||
| + | AAGGAGACAAAATGGCTGCCTTTACAGCTGCAGCAAGATGTGGAAACACTGGTTCCCTAGGCACCTCCAT | ||
| + | TGTCTTCCCGCCTTGGGAGCATGAAATAAATAAAGTGTGAAGGGGAACATGAGGAAGACTGATCCAAGTC | ||
| + | AAAAAAAAAAAAAAAA</dnaseq> | ||
| + | |||
| + | ==Labs working on this lncRNA== | ||
| + | *Department of Radiology, Union Hospital of Tongji Medical College, Huazhong University of Science and Technology, Wuhan, People's Republic of China. | ||
| + | ==References== | ||
| + | <references> | ||
| + | <ref name="ref1"> | ||
| + | Wang S, Fan W, Wan B, Tu M, Jin F, Liu F, Xu H, Han P. Characterization of | ||
| + | long noncoding RNA and messenger RNA signatures in melanoma tumorigenesis and | ||
| + | metastasis. PLoS One. 2017 Feb 22;12(2). | ||
| + | </ref> | ||
| + | </references> | ||
Latest revision as of 07:31, 31 August 2017
Contents
Annotated Information
Name
MIR200CHG:MIR200C and MIR141 host gene
U47924.27 [1]
Characteristics
U47924.27, which is located on chromosome 12, is a lincRNA (long intergenic non-coding RNA) [1].
Function
Low expression of U47924.27 is significantly associated with decreased survival of patients with melanoma [1].
Diseases
Melanoma [1]
Expression
U47924.27 is down-regulated in primary melanoma and metastatic melanoma [1].
Sequence
>NR_135032.1 Homo sapiens MIR200C and MIR141 host gene (MIR200CHG), long non-coding RNA
000001 AAGAGCGGAG GCCAGGGCGG GCTCTAGGCC GTGGAATCTG GGGCCTTAAA GCCCCTTCGT CTCCCCAGCA CCCACTCTCT 000080
000081 GGGGGCAGGT GGGCCCGGTG ACAGTAACCT TCAGGGAGCC CTGAAGACCA TGGAGGACTA CTGACCAACA ACCTCTGACC 000160
000161 TTCACCCCTC TGGATGGGGG ACGAATCACT AGGCAAAGGG GAACAATGGG AAGGAGACAA AATGGCTGCC TTTACAGCTG 000240
000241 CAGCAAGATG TGGAAACACT GGTTCCCTAG GCACCTCCAT TGTCTTCCCG CCTTGGGAGC ATGAAATAAA TAAAGTGTGA 000320
000321 AGGGGAACAT GAGGAAGACT GATCCAAGTC AAAAAAAAAA AAAAAA
000081 GGGGGCAGGT GGGCCCGGTG ACAGTAACCT TCAGGGAGCC CTGAAGACCA TGGAGGACTA CTGACCAACA ACCTCTGACC 000160
000161 TTCACCCCTC TGGATGGGGG ACGAATCACT AGGCAAAGGG GAACAATGGG AAGGAGACAA AATGGCTGCC TTTACAGCTG 000240
000241 CAGCAAGATG TGGAAACACT GGTTCCCTAG GCACCTCCAT TGTCTTCCCG CCTTGGGAGC ATGAAATAAA TAAAGTGTGA 000320
000321 AGGGGAACAT GAGGAAGACT GATCCAAGTC AAAAAAAAAA AAAAAA
Labs working on this lncRNA
- Department of Radiology, Union Hospital of Tongji Medical College, Huazhong University of Science and Technology, Wuhan, People's Republic of China.
