Difference between revisions of "LINC02489"
Guangyu Wang (talk | contribs) (Created page with "==Annotated Information== ===Approved Symbol=== LINC02489 ===Approved Name=== long intergenic non-protein coding RNA 2489 ===Previous Symbols=== _ ===Synonyms=== CTD-2589M5 ==...") |
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==Annotated Information== | ==Annotated Information== | ||
| − | === | + | ===Name=== |
| − | LINC02489 | + | LINC02489:long intergenic non-protein coding RNA 2489 |
| − | + | ||
| − | long intergenic non-protein coding RNA 2489 | + | CTD-2589M5 <ref name="ref1" /> |
| − | = | + | |
| − | + | ===Function=== | |
| − | === | + | LncRNA CTD-2589M5 is found to have conserved interaction with miR-210 based on the prediction results of mircode (http://www.mircode.org/) <ref name="ref1" />. |
| − | CTD-2589M5 | + | |
| − | === | + | ===Expression=== |
| − | + | Expression level of lncRNA CTD-2589M5 is significantly increased in osteosarcoma tissues comparing with the matched non-tumor tissues <ref name="ref1" />. | |
| − | === | + | |
| − | + | ===Diseases=== | |
| − | === | + | Osteosarcoma <ref name="ref1" /> |
| − | + | ||
| − | == | + | ===Sequence=== |
| − | + | >XR_001748205.1 PREDICTED: Homo sapiens uncharacterized LOC101928919 (LOC101928919), transcript variant X2, ncRNA | |
| − | == | + | <dnaseq>AGTTAGGGGATGGAGGCCAACGTTGGCTCTGCAAACACCACCTCCACAGGCCCAAATACTGCAGGTCACG |
| − | + | AGAGGCACTGATGGCAGCTCCTTCTGTGACGGGCTCAGGAACACCTGGTTGCTGCTCTCCATGAGCTGTT | |
| + | CCAACTGTGAAGCAAAAGCTTCATGCATAAAGGCATCCCAACGCAGTCAATGACGCACAGGAGAAAGAGG | ||
| + | ACAGAGATAAGCTTCTTGCCTGTTCCAGACACTGAGGATCAGGCAGAGAGAGAGGCTCCTGCCAGGCTGA | ||
| + | GCTTTTCCGGAGTGTGGATATGAACAGCCGTCTTGGGTCCTGAGGTGGAAGCCATGTGTGGAAGATGGAG | ||
| + | GGCATCGGTTAGAAGGAGTCTAGTCCCTGATGGTCACTGAGCTGCAGAACCAGCCTGGGCTGCTTCCTGC | ||
| + | TGGATGTCACTTACTAGAGAGCGAAATTAAATGTGCTTCAGCTACTGTTA</dnaseq> | ||
| + | |||
| + | |||
| + | ==Labs working on this lncRNA== | ||
| + | *Department of Orthopaedics, The Third Xiangya Hospital, Central South University, Changsha, Hunan 410013, China. | ||
| + | ==References== | ||
| + | <references> | ||
| + | <ref name="ref1"> | ||
| + | Wang Z, Liu Z, Wu S. Long non-coding RNA CTA sensitizes osteosarcoma cells to | ||
| + | doxorubicin through inhibition of autophagy. Oncotarget. 2017 May | ||
| + | 9;8(19):31465-31477. | ||
| + | </ref> | ||
| + | </references> | ||
Latest revision as of 09:13, 28 August 2017
Contents
Annotated Information
Name
LINC02489:long intergenic non-protein coding RNA 2489
CTD-2589M5 [1]
Function
LncRNA CTD-2589M5 is found to have conserved interaction with miR-210 based on the prediction results of mircode (http://www.mircode.org/) [1].
Expression
Expression level of lncRNA CTD-2589M5 is significantly increased in osteosarcoma tissues comparing with the matched non-tumor tissues [1].
Diseases
Osteosarcoma [1]
Sequence
>XR_001748205.1 PREDICTED: Homo sapiens uncharacterized LOC101928919 (LOC101928919), transcript variant X2, ncRNA
000001 AGTTAGGGGA TGGAGGCCAA CGTTGGCTCT GCAAACACCA CCTCCACAGG CCCAAATACT GCAGGTCACG AGAGGCACTG 000080
000081 ATGGCAGCTC CTTCTGTGAC GGGCTCAGGA ACACCTGGTT GCTGCTCTCC ATGAGCTGTT CCAACTGTGA AGCAAAAGCT 000160
000161 TCATGCATAA AGGCATCCCA ACGCAGTCAA TGACGCACAG GAGAAAGAGG ACAGAGATAA GCTTCTTGCC TGTTCCAGAC 000240
000241 ACTGAGGATC AGGCAGAGAG AGAGGCTCCT GCCAGGCTGA GCTTTTCCGG AGTGTGGATA TGAACAGCCG TCTTGGGTCC 000320
000321 TGAGGTGGAA GCCATGTGTG GAAGATGGAG GGCATCGGTT AGAAGGAGTC TAGTCCCTGA TGGTCACTGA GCTGCAGAAC 000400
000401 CAGCCTGGGC TGCTTCCTGC TGGATGTCAC TTACTAGAGA GCGAAATTAA ATGTGCTTCA GCTACTGTTA
000081 ATGGCAGCTC CTTCTGTGAC GGGCTCAGGA ACACCTGGTT GCTGCTCTCC ATGAGCTGTT CCAACTGTGA AGCAAAAGCT 000160
000161 TCATGCATAA AGGCATCCCA ACGCAGTCAA TGACGCACAG GAGAAAGAGG ACAGAGATAA GCTTCTTGCC TGTTCCAGAC 000240
000241 ACTGAGGATC AGGCAGAGAG AGAGGCTCCT GCCAGGCTGA GCTTTTCCGG AGTGTGGATA TGAACAGCCG TCTTGGGTCC 000320
000321 TGAGGTGGAA GCCATGTGTG GAAGATGGAG GGCATCGGTT AGAAGGAGTC TAGTCCCTGA TGGTCACTGA GCTGCAGAAC 000400
000401 CAGCCTGGGC TGCTTCCTGC TGGATGTCAC TTACTAGAGA GCGAAATTAA ATGTGCTTCA GCTACTGTTA
Labs working on this lncRNA
- Department of Orthopaedics, The Third Xiangya Hospital, Central South University, Changsha, Hunan 410013, China.
