Difference between revisions of "LINC02490"
Guangyu Wang (talk | contribs) (Created page with "==Annotated Information== ===Approved Symbol=== LINC02490 ===Approved Name=== long intergenic non-protein coding RNA 2490 ===Previous Symbols=== _ ===Synonyms=== RP11-209E8 ==...") |
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==Annotated Information== | ==Annotated Information== | ||
| − | === | + | ===Name=== |
| − | LINC02490 | + | LINC02490:long intergenic non-protein coding RNA 2490 |
| − | + | ||
| − | long intergenic non-protein coding RNA 2490 | + | RP11-209E8 <ref name="ref1" /> |
| − | === | + | |
| − | + | ===Function=== | |
| − | === | + | LncRNA RP11-209E8 is found to have conserved interaction with miR-210 based on the prediction results of mircode (http://www.mircode.org/) <ref name="ref1" />. |
| − | RP11-209E8 | + | |
| − | === | + | ===Expression=== |
| − | + | Although RP11-209E8 is predicted to have conserved interaction with miR-210 and miR-210 is an important gene in osteosarcoma regulation, its expression shows no significant difference in osteosarcoma tissues and their matched non-tumor tissues <ref name="ref1" />. | |
| − | == | + | |
| − | + | ===Sequence=== | |
| − | == | + | >NR_147181.1 Homo sapiens long intergenic non-protein coding RNA 2490 (LINC02490), long non-coding RNA |
| − | + | <dnaseq>GCTCTCTTCTGCTCTTCTGCCCTGTGAGGATGCAGCAAGAAAACCCTCACCAGATGCCAGTGCCTTGATC | |
| − | + | TTGGACTTCCCAGCCCCCAGAGCTGACTAGATCGCTAGCTGGCCCTTTGATTTAACTCTTCATCTACCAT | |
| − | + | AGTCAGGTGCCACAGCTTGATGAACGAGATAGAATCGCACAATGGGATCAAAGGGACAGCCAGCCCAGTT | |
| − | + | TATTTCCAGAGGAAAAGCTTACCAGGACACAAAGGAGGAAAAAAGACTCGGCTTGAAACCAATTCTTCCC | |
| − | + | TGAAGTACAAATGTAAGAGAAAAGACATCACCAGGAGCAGTTACGTCTATGGCAATCGTAGCTCTGTAAG | |
| + | CCTGGCCTGCTCACGTGGAAGTAAATTATTTGATGAGCTGGGGAAATATAAGCAGTTTGTGTGGATTAAA | ||
| + | AGGAAATCCTCACCCAAACTATATCTTTAAAAATTATCTAGATAATTCAGGTGAAAGCAGGCTTTCTCCC | ||
| + | TTGTGAATTATTAAAGTAATTGATTACATCCATCTGCTCCTCGTCAGAGAATTCAAGGGCCAAATGCTTT | ||
| + | TTCGGCGTCTCCTTTTCTATCCTTCCCTTTCATGTGACTTA</dnaseq> | ||
| + | |||
| + | ==Labs working on this lncRNA== | ||
| + | *Department of Orthopaedics, The Third Xiangya Hospital, Central South University, Changsha, Hunan 410013, China. | ||
| + | ==References== | ||
| + | <references> | ||
| + | <ref name="ref1"> | ||
| + | Wang Z, Liu Z, Wu S. Long non-coding RNA CTA sensitizes osteosarcoma cells to | ||
| + | doxorubicin through inhibition of autophagy. Oncotarget. 2017 May | ||
| + | 9;8(19):31465-31477. | ||
| + | </ref> | ||
| + | </references> | ||
Latest revision as of 09:17, 28 August 2017
Contents
Annotated Information
Name
LINC02490:long intergenic non-protein coding RNA 2490
RP11-209E8 [1]
Function
LncRNA RP11-209E8 is found to have conserved interaction with miR-210 based on the prediction results of mircode (http://www.mircode.org/) [1].
Expression
Although RP11-209E8 is predicted to have conserved interaction with miR-210 and miR-210 is an important gene in osteosarcoma regulation, its expression shows no significant difference in osteosarcoma tissues and their matched non-tumor tissues [1].
Sequence
>NR_147181.1 Homo sapiens long intergenic non-protein coding RNA 2490 (LINC02490), long non-coding RNA
000001 GCTCTCTTCT GCTCTTCTGC CCTGTGAGGA TGCAGCAAGA AAACCCTCAC CAGATGCCAG TGCCTTGATC TTGGACTTCC 000080
000081 CAGCCCCCAG AGCTGACTAG ATCGCTAGCT GGCCCTTTGA TTTAACTCTT CATCTACCAT AGTCAGGTGC CACAGCTTGA 000160
000161 TGAACGAGAT AGAATCGCAC AATGGGATCA AAGGGACAGC CAGCCCAGTT TATTTCCAGA GGAAAAGCTT ACCAGGACAC 000240
000241 AAAGGAGGAA AAAAGACTCG GCTTGAAACC AATTCTTCCC TGAAGTACAA ATGTAAGAGA AAAGACATCA CCAGGAGCAG 000320
000321 TTACGTCTAT GGCAATCGTA GCTCTGTAAG CCTGGCCTGC TCACGTGGAA GTAAATTATT TGATGAGCTG GGGAAATATA 000400
000401 AGCAGTTTGT GTGGATTAAA AGGAAATCCT CACCCAAACT ATATCTTTAA AAATTATCTA GATAATTCAG GTGAAAGCAG 000480
000481 GCTTTCTCCC TTGTGAATTA TTAAAGTAAT TGATTACATC CATCTGCTCC TCGTCAGAGA ATTCAAGGGC CAAATGCTTT 000560
000561 TTCGGCGTCT CCTTTTCTAT CCTTCCCTTT CATGTGACTT A
000081 CAGCCCCCAG AGCTGACTAG ATCGCTAGCT GGCCCTTTGA TTTAACTCTT CATCTACCAT AGTCAGGTGC CACAGCTTGA 000160
000161 TGAACGAGAT AGAATCGCAC AATGGGATCA AAGGGACAGC CAGCCCAGTT TATTTCCAGA GGAAAAGCTT ACCAGGACAC 000240
000241 AAAGGAGGAA AAAAGACTCG GCTTGAAACC AATTCTTCCC TGAAGTACAA ATGTAAGAGA AAAGACATCA CCAGGAGCAG 000320
000321 TTACGTCTAT GGCAATCGTA GCTCTGTAAG CCTGGCCTGC TCACGTGGAA GTAAATTATT TGATGAGCTG GGGAAATATA 000400
000401 AGCAGTTTGT GTGGATTAAA AGGAAATCCT CACCCAAACT ATATCTTTAA AAATTATCTA GATAATTCAG GTGAAAGCAG 000480
000481 GCTTTCTCCC TTGTGAATTA TTAAAGTAAT TGATTACATC CATCTGCTCC TCGTCAGAGA ATTCAAGGGC CAAATGCTTT 000560
000561 TTCGGCGTCT CCTTTTCTAT CCTTCCCTTT CATGTGACTT A
Labs working on this lncRNA
- Department of Orthopaedics, The Third Xiangya Hospital, Central South University, Changsha, Hunan 410013, China.
