Difference between revisions of "DPYD-AS2"
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==Annotated Information== | ==Annotated Information== | ||
| − | === | + | ===Name=== |
| − | DPYD-AS2 | + | DPYD-AS2:DPYD antisense RNA 2 |
| − | === | + | |
| − | DPYD antisense | + | ENST00000422259 <ref name="ref1" /> |
| − | === | + | |
| − | + | ===Characteristics=== | |
| − | === | + | ENST00000422259 is a DPYD (dihydropyrimidine dehydrogenase, a pyrimidinecatabolic pathway gene) intronic antisense lncRNA <ref name="ref1" />. |
| − | + | ||
| − | === | + | ===Diseases=== |
| − | + | Cervical squamous cancers <ref name="ref1" /> | |
| − | === | + | |
| − | NR_046591 | + | ===Expression=== |
| − | == | + | ENST00000422259 is significantly upregulated in SiHa/ΔNp63αstable cell lines <ref name="ref1" />. |
| − | + | ||
| − | == | + | ===Regulation=== |
| − | + | ENST00000422259 may be a target of ΔNp63αas it is differentially expressed in ΔNp63α overexpression cells and knockdown cells <ref name="ref1" />. | |
| − | = | + | |
| − | + | ===Sequence=== | |
| − | + | >NR_046591.1 Homo sapiens DPYD antisense RNA 2 (DPYD-AS2), long non-coding RNA | |
| − | + | <dnaseq>GGCAGCAGCAAGCTGATTACACAGGGAAAAGCTTCTATCTAAATACACATAGCATAACAATCACCCCTGG | |
| + | AAAAACTACATGGCTTACCAAAAGAGGTCTCTCTGTTCACTGTCCATTATCTGTTGACTGAACTAGTTCA | ||
| + | AATGAATAACAACCATACAAACACATATATACACAAATATACATATGCTTCAATGAAAAGCAGGCATGCA | ||
| + | GCTGACAGCTCGGCAACCCTGAGCACAGAATTTTGAAGAGAGAATACACTAAAAGGGAAGAACATAACTA | ||
| + | CATGACATCATAAGAAGTCCTGAATTAGAAGCGTATATTTGAAAGGTCATGCATCCTGAGCTGCCAACAG | ||
| + | CTTAACAACCAGAGGCAGAGGCCAGCTTTGCCAGCTCACTGCTTCTACTCATCTTTCATGATAGTAGCCA | ||
| + | GGCTGAATATAGTTCCAGGATGATAATGAATTGGCTGGGCATACTGTTTATATTAGTATGTATGTTCCTG | ||
| + | TACTAAACCAAGCATCATGAGGCCAGCACTATTTTGCCATTTTTCAGAAAAAAAATATGAACCCTTCAAA | ||
| + | ACATAGTAAGCCTTTTTTAAAGTATATATTTGATTTTGAAATAATCAAAATATATGTAGGGATATGACTG | ||
| + | CATCCTAAGATTTATGATAAGTTCTGATGAGTAATATTTTCTTTCTACATGCAAGGCAAAGTTAATAGTA | ||
| + | ACTAGAAAGTCTTTATTTGGCATATCATAGATTTCTGTCAACCAAAACAACTAACTCTGGGGAACATAAC | ||
| + | GTTCTGACAACTTCAGAAGAGTTAAGTCACAGACAAAAGTTTATTGG</dnaseq> | ||
| + | |||
| + | ==Labs working on this lncRNA== | ||
| + | *Department of Obstetrics and Gynecology, Anhui Provincial Hospital, Anhui Medical University, Hefei 230001, China. | ||
| + | ==References== | ||
| + | <references> | ||
| + | <ref name="ref1"> | ||
| + | Qian L, Xu F, Wang X, Jiang M, Wang J, Song W, Wu D, Shen Z, Feng D, Ling B, | ||
| + | Cheng Y, Xiao W, Shan G, Zhou Y. LncRNA expression profile of ΔNp63α in cervical | ||
| + | squamous cancers and its suppressive effects on LIF expression. Cytokine. 2017 | ||
| + | Aug;96:114-122 | ||
| + | </ref> | ||
| + | </references> | ||
Latest revision as of 03:09, 30 August 2017
Contents
Annotated Information
Name
DPYD-AS2:DPYD antisense RNA 2
ENST00000422259 [1]
Characteristics
ENST00000422259 is a DPYD (dihydropyrimidine dehydrogenase, a pyrimidinecatabolic pathway gene) intronic antisense lncRNA [1].
Diseases
Cervical squamous cancers [1]
Expression
ENST00000422259 is significantly upregulated in SiHa/ΔNp63αstable cell lines [1].
Regulation
ENST00000422259 may be a target of ΔNp63αas it is differentially expressed in ΔNp63α overexpression cells and knockdown cells [1].
Sequence
>NR_046591.1 Homo sapiens DPYD antisense RNA 2 (DPYD-AS2), long non-coding RNA
000001 GGCAGCAGCA AGCTGATTAC ACAGGGAAAA GCTTCTATCT AAATACACAT AGCATAACAA TCACCCCTGG AAAAACTACA 000080
000081 TGGCTTACCA AAAGAGGTCT CTCTGTTCAC TGTCCATTAT CTGTTGACTG AACTAGTTCA AATGAATAAC AACCATACAA 000160
000161 ACACATATAT ACACAAATAT ACATATGCTT CAATGAAAAG CAGGCATGCA GCTGACAGCT CGGCAACCCT GAGCACAGAA 000240
000241 TTTTGAAGAG AGAATACACT AAAAGGGAAG AACATAACTA CATGACATCA TAAGAAGTCC TGAATTAGAA GCGTATATTT 000320
000321 GAAAGGTCAT GCATCCTGAG CTGCCAACAG CTTAACAACC AGAGGCAGAG GCCAGCTTTG CCAGCTCACT GCTTCTACTC 000400
000401 ATCTTTCATG ATAGTAGCCA GGCTGAATAT AGTTCCAGGA TGATAATGAA TTGGCTGGGC ATACTGTTTA TATTAGTATG 000480
000481 TATGTTCCTG TACTAAACCA AGCATCATGA GGCCAGCACT ATTTTGCCAT TTTTCAGAAA AAAAATATGA ACCCTTCAAA 000560
000561 ACATAGTAAG CCTTTTTTAA AGTATATATT TGATTTTGAA ATAATCAAAA TATATGTAGG GATATGACTG CATCCTAAGA 000640
000641 TTTATGATAA GTTCTGATGA GTAATATTTT CTTTCTACAT GCAAGGCAAA GTTAATAGTA ACTAGAAAGT CTTTATTTGG 000720
000721 CATATCATAG ATTTCTGTCA ACCAAAACAA CTAACTCTGG GGAACATAAC GTTCTGACAA CTTCAGAAGA GTTAAGTCAC 000800
000801 AGACAAAAGT TTATTGG
000081 TGGCTTACCA AAAGAGGTCT CTCTGTTCAC TGTCCATTAT CTGTTGACTG AACTAGTTCA AATGAATAAC AACCATACAA 000160
000161 ACACATATAT ACACAAATAT ACATATGCTT CAATGAAAAG CAGGCATGCA GCTGACAGCT CGGCAACCCT GAGCACAGAA 000240
000241 TTTTGAAGAG AGAATACACT AAAAGGGAAG AACATAACTA CATGACATCA TAAGAAGTCC TGAATTAGAA GCGTATATTT 000320
000321 GAAAGGTCAT GCATCCTGAG CTGCCAACAG CTTAACAACC AGAGGCAGAG GCCAGCTTTG CCAGCTCACT GCTTCTACTC 000400
000401 ATCTTTCATG ATAGTAGCCA GGCTGAATAT AGTTCCAGGA TGATAATGAA TTGGCTGGGC ATACTGTTTA TATTAGTATG 000480
000481 TATGTTCCTG TACTAAACCA AGCATCATGA GGCCAGCACT ATTTTGCCAT TTTTCAGAAA AAAAATATGA ACCCTTCAAA 000560
000561 ACATAGTAAG CCTTTTTTAA AGTATATATT TGATTTTGAA ATAATCAAAA TATATGTAGG GATATGACTG CATCCTAAGA 000640
000641 TTTATGATAA GTTCTGATGA GTAATATTTT CTTTCTACAT GCAAGGCAAA GTTAATAGTA ACTAGAAAGT CTTTATTTGG 000720
000721 CATATCATAG ATTTCTGTCA ACCAAAACAA CTAACTCTGG GGAACATAAC GTTCTGACAA CTTCAGAAGA GTTAAGTCAC 000800
000801 AGACAAAAGT TTATTGG
Labs working on this lncRNA
- Department of Obstetrics and Gynecology, Anhui Provincial Hospital, Anhui Medical University, Hefei 230001, China.
