Difference between revisions of "ACTR3-AS1"
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''ACTR3-AS1'', a set of biomarkers for the prognosis of patients with GBM,enabling a moreaccurate prediction of survival and revealingmorebiological functions. | ''ACTR3-AS1'', a set of biomarkers for the prognosis of patients with GBM,enabling a moreaccurate prediction of survival and revealingmorebiological functions. | ||
==Annotated Information== | ==Annotated Information== | ||
| − | + | Approved symbol:ACTR3-AS1 | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | + | Approved name: ACTR3 antisense RNA 1 | |
| + | |||
| + | HGNC ID:53965 | ||
| + | |||
| + | Alias symbols: AC104653.1 | ||
| + | |||
| + | RefSeq ID:NR_110174 | ||
| + | |||
| + | ==Characteristics== | ||
''ACTR3-AS1'' is a long noncoding RNA with esemble id ENSG00000115091, and is located on chromosome 2q14.1 <ref name="ref1" />. | ''ACTR3-AS1'' is a long noncoding RNA with esemble id ENSG00000115091, and is located on chromosome 2q14.1 <ref name="ref1" />. | ||
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''ACTR3-AS1'' is enriched with ion binding, transport, cell-cell signaling, plasmamembrane parts, and more, and they were mainly related to neuroactive ligand-receptor interaction pathway, calcium signaling pathway, and the mitogen-activated protein kinase signaling pathway <ref name="ref1" />. | ''ACTR3-AS1'' is enriched with ion binding, transport, cell-cell signaling, plasmamembrane parts, and more, and they were mainly related to neuroactive ligand-receptor interaction pathway, calcium signaling pathway, and the mitogen-activated protein kinase signaling pathway <ref name="ref1" />. | ||
| − | + | ==Regulation== | |
NA | NA | ||
| − | + | ==Diseases== | |
*Glioblastoma <ref name="ref1" />. | *Glioblastoma <ref name="ref1" />. | ||
| − | + | ==Expression== | |
''ACTR3-AS1'' is expressed in brain tissues <ref name="ref1" />. | ''ACTR3-AS1'' is expressed in brain tissues <ref name="ref1" />. | ||
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</references> | </references> | ||
| − | + | ==Sequence== | |
>gi|101060091|ref|NR_110174.1|Homo sapiens ACTR3 antisense RNA 1 (ACTR3-AS1), long non-coding RNA | >gi|101060091|ref|NR_110174.1|Homo sapiens ACTR3 antisense RNA 1 (ACTR3-AS1), long non-coding RNA | ||
| − | AGTAACACATGACATCTTTCTCCCTCGAATTAAAATGTGACTTGGTTCACCGGTTAAAACGCAGAGGGAG | + | <dnaseq>AGTAACACATGACATCTTTCTCCCTCGAATTAAAATGTGACTTGGTTCACCGGTTAAAACGCAGAGGGAG |
ATGGAAATGACCAGGAGTCGAAAGGAGAAGATAAGAGTGCAGTGGTGCAGTCATGGCTCACTGCAGCGTC | ATGGAAATGACCAGGAGTCGAAAGGAGAAGATAAGAGTGCAGTGGTGCAGTCATGGCTCACTGCAGCGTC | ||
TGCCTCCTGGACTCAAAGAATCCTCCTACCTCAGCCTCCCAAGTAGCTAGGACCACAGAGTTGTGCTCTC | TGCCTCCTGGACTCAAAGAATCCTCCTACCTCAGCCTCCCAAGTAGCTAGGACCACAGAGTTGTGCTCTC | ||
| Line 42: | Line 46: | ||
ACAGCAGAAGTTGCCTTCCCCATGGTAGCTTAGCAACTTCGTGTCTCTCCAAGGCAGAGAGGAAAATCAA | ACAGCAGAAGTTGCCTTCCCCATGGTAGCTTAGCAACTTCGTGTCTCTCCAAGGCAGAGAGGAAAATCAA | ||
GTCTAACAGGCCTTCCCGAAGGCTAGGTGTGAAATACCAGAAGCCATCTTTGTTTCTGGCGATGTCACTA | GTCTAACAGGCCTTCCCGAAGGCTAGGTGTGAAATACCAGAAGCCATCTTTGTTTCTGGCGATGTCACTA | ||
| − | AATAAGTATTTGTTGATATAAAGTATTACA | + | AATAAGTATTTGTTGATATAAAGTATTACA</dnaseq> |
Latest revision as of 10:19, 19 February 2021
ACTR3-AS1, a set of biomarkers for the prognosis of patients with GBM,enabling a moreaccurate prediction of survival and revealingmorebiological functions.
Contents
Annotated Information
Approved symbol:ACTR3-AS1
Approved name: ACTR3 antisense RNA 1
HGNC ID:53965
Alias symbols: AC104653.1
RefSeq ID:NR_110174
Characteristics
ACTR3-AS1 is a long noncoding RNA with esemble id ENSG00000115091, and is located on chromosome 2q14.1 [1].
Function
ACTR3-AS1 is enriched with ion binding, transport, cell-cell signaling, plasmamembrane parts, and more, and they were mainly related to neuroactive ligand-receptor interaction pathway, calcium signaling pathway, and the mitogen-activated protein kinase signaling pathway [1].
Regulation
NA
Diseases
- Glioblastoma [1].
Expression
ACTR3-AS1 is expressed in brain tissues [1].
Labs working on this lncRNA
- Department of Neurosurgery, Nanfang Hospital, Southern Medical University, Guangzhou, People's Republic of China.
- Department of Neurosurgery, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, People's Republic of China.
References
Sequence
>gi|101060091|ref|NR_110174.1|Homo sapiens ACTR3 antisense RNA 1 (ACTR3-AS1), long non-coding RNA
000001 AGTAACACAT GACATCTTTC TCCCTCGAAT TAAAATGTGA CTTGGTTCAC CGGTTAAAAC GCAGAGGGAG ATGGAAATGA 000080
000081 CCAGGAGTCG AAAGGAGAAG ATAAGAGTGC AGTGGTGCAG TCATGGCTCA CTGCAGCGTC TGCCTCCTGG ACTCAAAGAA 000160
000161 TCCTCCTACC TCAGCCTCCC AAGTAGCTAG GACCACAGAG TTGTGCTCTC CTGCAGCGTT TTGCGGACGG CTGGCTATCT 000240
000241 TACCCAGAAT CAATCACACT GGGACACTGA AAAAAAAAAA AAAGGAAAAA AGAGCGAGGG AGTAATTCTA GCCTGTTTTT 000320
000321 ACAAGAACAC AGTGGCTATA GACAGTGCCA GTGTGAAGAT GACTCAGCAA ACGTGGAGAA CCAAAGATTC TAGGGCAGCA 000400
000401 CCAAAACTGG GAAAGCAATT ACAGCAGAAG TTGCCTTCCC CATGGTAGCT TAGCAACTTC GTGTCTCTCC AAGGCAGAGA 000480
000481 GGAAAATCAA GTCTAACAGG CCTTCCCGAA GGCTAGGTGT GAAATACCAG AAGCCATCTT TGTTTCTGGC GATGTCACTA 000560
000561 AATAAGTATT TGTTGATATA AAGTATTACA
000081 CCAGGAGTCG AAAGGAGAAG ATAAGAGTGC AGTGGTGCAG TCATGGCTCA CTGCAGCGTC TGCCTCCTGG ACTCAAAGAA 000160
000161 TCCTCCTACC TCAGCCTCCC AAGTAGCTAG GACCACAGAG TTGTGCTCTC CTGCAGCGTT TTGCGGACGG CTGGCTATCT 000240
000241 TACCCAGAAT CAATCACACT GGGACACTGA AAAAAAAAAA AAAGGAAAAA AGAGCGAGGG AGTAATTCTA GCCTGTTTTT 000320
000321 ACAAGAACAC AGTGGCTATA GACAGTGCCA GTGTGAAGAT GACTCAGCAA ACGTGGAGAA CCAAAGATTC TAGGGCAGCA 000400
000401 CCAAAACTGG GAAAGCAATT ACAGCAGAAG TTGCCTTCCC CATGGTAGCT TAGCAACTTC GTGTCTCTCC AAGGCAGAGA 000480
000481 GGAAAATCAA GTCTAACAGG CCTTCCCGAA GGCTAGGTGT GAAATACCAG AAGCCATCTT TGTTTCTGGC GATGTCACTA 000560
000561 AATAAGTATT TGTTGATATA AAGTATTACA
