Difference between revisions of "ILF3-AS1"
Qianpeng Li (talk | contribs) |
Qianpeng Li (talk | contribs) |
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| − | ''ILF3-AS1'', | + | ''ILF3-AS1'', a lncRNA that is associated with melanoma. |
==Annotated Information== | ==Annotated Information== | ||
===Name=== | ===Name=== | ||
| Line 28: | Line 28: | ||
===Expression=== | ===Expression=== | ||
| − | ''ILF3-DT' is up-regulated in melanoma tissues and cell lines<ref name="ref1" />. | + | ''ILF3-DT'' is up-regulated in melanoma tissues and cell lines<ref name="ref1" />. |
===Evolution=== | ===Evolution=== | ||
| + | ===Sequence=== | ||
| + | >gi|210147556|ref|NR_024333.1| Homo sapiens ILF3 antisense RNA 1 (head to head) (ILF3-AS1), long non-coding RNA | ||
| + | <dnaseq>ATCTTACGCCCGTCGCCCTGAGTACGTTAGCGGAAATGGCTCCGAGAGGCTTTGACGCATGTGTACCTTTTTAGTGGCGGTATCTCGGCCGGGGATTTTCGGGCTCCAGTGGAGGTGGCTATGCTCACCCCATCTCCCTTGAGAGGCACAGAAGGTTAGAGATGTGTGCGAGGAACGGCCAGGTCCAGCGTCTCCTCGTTGCTGCCCCTTGAGCCCGGGACCGGCGCCAATGCGCGCCCGGGTTCTTGGGTTCTTTCGTCCCGCAGACCTGCCTTGGTGTGGCGTCCCTGGGCCGTAGCTTCCGAAGGCTGCAGCCGACCTGGTCGGGGTCCTCTAGCCCGCCTTCCCCTTCCCCCATTGACAGATGGAGAAACTGAGGCCCAGGCCAAAAAATATCTCACTAGAGGGCTCACCGCCATTTCCTGGAAAAATTGGGGCTGGGACTCAACGGACGCTCGTCCAGCAGCAGCGCGGAGCTCCGAAGTAAAGGCGCCCGTGACCGAGTGCTTTGTCCTTACAAGCGTGGTGTTCTTGAATGCTTCCAGGCGCCTTATGAGGCCCCCGATGTACAATCTGTGCTTAACTAAACCCCACTGTCTTCCAGGGTCAGGTTGGCCATCCGCAGGCGTAGTTGCTAGGAAGGTTTGACAGATGTCCGCCTGTTGATTCAGACGTTCCCAGGATTTGGAGCAAGAAGAGCAAGGAAGGCCAGGCGCGGTGGCTCACGTTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGTTCGAGACCAGCCTGGCCAGCATGGTGAAACCCCGTCTCTACTAAAAATACAAAAGAAAATTAGCCGGGTGTGGTGGCACATGCCTGTAGTCCCACCTACTTGGGAGGCTGAGGCAGGAGAATTGTTTGACCTGGCAGGCGGAGGTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGTCTGGGCGACAGAGCGAGACTCTGTCTCAGAAAAAAAAAAGAGCAAGGAGGTGTTGAAAATGGGTTTCCTGGCTGGGCGTGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAAGCTGAGGTGGGCGGATCACTTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACACCGTCTCCACTAAAAATAGAAAAATTAACTGGGTGTGGTGGAGGGCGCCTGTAATCCCAGCTAATCAGGAAGCTGAGACAGGAGGATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATTGCTCCATTGCACTCCAGCCTGGGCGATAGAGTGAGACTCAGCCTCAAAAAAAAAAAAAAAAAAAAATTCGCCAGGTGTGGTGGTGTGCGCCTATAATCCCAGCTACTCAGGAGGCAGAGGCACAAGAATGGCTTGAATCACTTGAACCTGGGAGGCAGAGGTTACAATGAGCCGAGATGGCACCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGACTTCCCATCTTAAAAAAAAAAAAAAAAAAAAAAAAGAAGTGTAAAGATGTGATTATGTGGCAGGGGGTAAGGGTTAAAAAGAAAACAAGAACAAGTTTTCCTCTGCTTAGCCAGCTTACTTCAAGGACAGTTATAACACTGAAAAGTCGAGGCCAAAGGAATGGGCTCCAGACAGCCTCCTCCGGAGCAAAGTTGAAAAGAAAAATTCCTTTACTGTCTCTCCTTTTCTGAACCATTAAATATGACTGTTTGCCAATGGTTGTATTTAGTAAGATTTGTAGACTCTGTTTTTCTTTTGACACAGCTGCAAGGCCAACAGCTGTGCAAAGCCACAAGTTATGCTAAGTCAGCAGTTATGCTATAGATTACATGACCTGTGACTGTATCATTAACTGCTTTTGTTTTGCTTCTGTAAGTTTGCCTATAAAAACCACACTCAGTCTTTGTTCAATGGTCAGCTTTTCAGATACAAATCCACTGAGCCGGTGTACATCTAAATAAATCCTCCTGTTTCCCGTGTCAAAAAAAAAAAAAAAAAAAAAA</dnaseq> | ||
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</ref>(1) | </ref>(1) | ||
</references> | </references> | ||
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Latest revision as of 01:51, 13 August 2019
ILF3-AS1, a lncRNA that is associated with melanoma.
Contents
Annotated Information
Name
Approved symbol: ILF3-DT
Previous symbols: ILF3-AS1
Approved name: ILF3-DT: ILF3 divergent transcript
HGNC ID: HGNC: 27115
Chromosome: 19p13.2
RefSeq ID: NR_024333
Ensembl ID: ENSG00000267100
Characteristics
Function
- ILF3-DT promotes cell proliferation, migration, and invasion via negatively regulating miR-200b/a/429 in melanoma[1].
Regulation
Diseases
Melanoma[1].
Expression
ILF3-DT is up-regulated in melanoma tissues and cell lines[1].
Evolution
Sequence
>gi|210147556|ref|NR_024333.1| Homo sapiens ILF3 antisense RNA 1 (head to head) (ILF3-AS1), long non-coding RNA
000001 ATCTTACGCC CGTCGCCCTG AGTACGTTAG CGGAAATGGC TCCGAGAGGC TTTGACGCAT GTGTACCTTT TTAGTGGCGG 000080
000081 TATCTCGGCC GGGGATTTTC GGGCTCCAGT GGAGGTGGCT ATGCTCACCC CATCTCCCTT GAGAGGCACA GAAGGTTAGA 000160
000161 GATGTGTGCG AGGAACGGCC AGGTCCAGCG TCTCCTCGTT GCTGCCCCTT GAGCCCGGGA CCGGCGCCAA TGCGCGCCCG 000240
000241 GGTTCTTGGG TTCTTTCGTC CCGCAGACCT GCCTTGGTGT GGCGTCCCTG GGCCGTAGCT TCCGAAGGCT GCAGCCGACC 000320
000321 TGGTCGGGGT CCTCTAGCCC GCCTTCCCCT TCCCCCATTG ACAGATGGAG AAACTGAGGC CCAGGCCAAA AAATATCTCA 000400
000401 CTAGAGGGCT CACCGCCATT TCCTGGAAAA ATTGGGGCTG GGACTCAACG GACGCTCGTC CAGCAGCAGC GCGGAGCTCC 000480
000481 GAAGTAAAGG CGCCCGTGAC CGAGTGCTTT GTCCTTACAA GCGTGGTGTT CTTGAATGCT TCCAGGCGCC TTATGAGGCC 000560
000561 CCCGATGTAC AATCTGTGCT TAACTAAACC CCACTGTCTT CCAGGGTCAG GTTGGCCATC CGCAGGCGTA GTTGCTAGGA 000640
000641 AGGTTTGACA GATGTCCGCC TGTTGATTCA GACGTTCCCA GGATTTGGAG CAAGAAGAGC AAGGAAGGCC AGGCGCGGTG 000720
000721 GCTCACGTTT GTAATCCCAG CACTTTGGGA GGCCGAGGCG GGCGGATCAC GAGGTCAGGA GTTCGAGACC AGCCTGGCCA 000800
000801 GCATGGTGAA ACCCCGTCTC TACTAAAAAT ACAAAAGAAA ATTAGCCGGG TGTGGTGGCA CATGCCTGTA GTCCCACCTA 000880
000881 CTTGGGAGGC TGAGGCAGGA GAATTGTTTG ACCTGGCAGG CGGAGGTTGC AGTGAGCCGA GATTGCGCCA CTGCACTCCA 000960
000961 GTCTGGGCGA CAGAGCGAGA CTCTGTCTCA GAAAAAAAAA AGAGCAAGGA GGTGTTGAAA ATGGGTTTCC TGGCTGGGCG 001040
001041 TGGTGGCTCA CGCTTGTAAT CCCAGCACTT TGGGAAGCTG AGGTGGGCGG ATCACTTGAG GTCAGGAGTT TGAGACCAGC 001120
001121 CTGGCCAACA TGGTGAAACA CCGTCTCCAC TAAAAATAGA AAAATTAACT GGGTGTGGTG GAGGGCGCCT GTAATCCCAG 001200
001201 CTAATCAGGA AGCTGAGACA GGAGGATCGC TTGAACCCAG GAGGCGGAGG TTGCAGTGAG CCGAGATTGC TCCATTGCAC 001280
001281 TCCAGCCTGG GCGATAGAGT GAGACTCAGC CTCAAAAAAA AAAAAAAAAA AAAATTCGCC AGGTGTGGTG GTGTGCGCCT 001360
001361 ATAATCCCAG CTACTCAGGA GGCAGAGGCA CAAGAATGGC TTGAATCACT TGAACCTGGG AGGCAGAGGT TACAATGAGC 001440
001441 CGAGATGGCA CCACTGCACT CCAGCCTGGG CGACAGAGCG AGACTCCGAC TTCCCATCTT AAAAAAAAAA AAAAAAAAAA 001520
001521 AAAAGAAGTG TAAAGATGTG ATTATGTGGC AGGGGGTAAG GGTTAAAAAG AAAACAAGAA CAAGTTTTCC TCTGCTTAGC 001600
001601 CAGCTTACTT CAAGGACAGT TATAACACTG AAAAGTCGAG GCCAAAGGAA TGGGCTCCAG ACAGCCTCCT CCGGAGCAAA 001680
001681 GTTGAAAAGA AAAATTCCTT TACTGTCTCT CCTTTTCTGA ACCATTAAAT ATGACTGTTT GCCAATGGTT GTATTTAGTA 001760
001761 AGATTTGTAG ACTCTGTTTT TCTTTTGACA CAGCTGCAAG GCCAACAGCT GTGCAAAGCC ACAAGTTATG CTAAGTCAGC 001840
001841 AGTTATGCTA TAGATTACAT GACCTGTGAC TGTATCATTA ACTGCTTTTG TTTTGCTTCT GTAAGTTTGC CTATAAAAAC 001920
001921 CACACTCAGT CTTTGTTCAA TGGTCAGCTT TTCAGA
000081 TATCTCGGCC GGGGATTTTC GGGCTCCAGT GGAGGTGGCT ATGCTCACCC CATCTCCCTT GAGAGGCACA GAAGGTTAGA 000160
000161 GATGTGTGCG AGGAACGGCC AGGTCCAGCG TCTCCTCGTT GCTGCCCCTT GAGCCCGGGA CCGGCGCCAA TGCGCGCCCG 000240
000241 GGTTCTTGGG TTCTTTCGTC CCGCAGACCT GCCTTGGTGT GGCGTCCCTG GGCCGTAGCT TCCGAAGGCT GCAGCCGACC 000320
000321 TGGTCGGGGT CCTCTAGCCC GCCTTCCCCT TCCCCCATTG ACAGATGGAG AAACTGAGGC CCAGGCCAAA AAATATCTCA 000400
000401 CTAGAGGGCT CACCGCCATT TCCTGGAAAA ATTGGGGCTG GGACTCAACG GACGCTCGTC CAGCAGCAGC GCGGAGCTCC 000480
000481 GAAGTAAAGG CGCCCGTGAC CGAGTGCTTT GTCCTTACAA GCGTGGTGTT CTTGAATGCT TCCAGGCGCC TTATGAGGCC 000560
000561 CCCGATGTAC AATCTGTGCT TAACTAAACC CCACTGTCTT CCAGGGTCAG GTTGGCCATC CGCAGGCGTA GTTGCTAGGA 000640
000641 AGGTTTGACA GATGTCCGCC TGTTGATTCA GACGTTCCCA GGATTTGGAG CAAGAAGAGC AAGGAAGGCC AGGCGCGGTG 000720
000721 GCTCACGTTT GTAATCCCAG CACTTTGGGA GGCCGAGGCG GGCGGATCAC GAGGTCAGGA GTTCGAGACC AGCCTGGCCA 000800
000801 GCATGGTGAA ACCCCGTCTC TACTAAAAAT ACAAAAGAAA ATTAGCCGGG TGTGGTGGCA CATGCCTGTA GTCCCACCTA 000880
000881 CTTGGGAGGC TGAGGCAGGA GAATTGTTTG ACCTGGCAGG CGGAGGTTGC AGTGAGCCGA GATTGCGCCA CTGCACTCCA 000960
000961 GTCTGGGCGA CAGAGCGAGA CTCTGTCTCA GAAAAAAAAA AGAGCAAGGA GGTGTTGAAA ATGGGTTTCC TGGCTGGGCG 001040
001041 TGGTGGCTCA CGCTTGTAAT CCCAGCACTT TGGGAAGCTG AGGTGGGCGG ATCACTTGAG GTCAGGAGTT TGAGACCAGC 001120
001121 CTGGCCAACA TGGTGAAACA CCGTCTCCAC TAAAAATAGA AAAATTAACT GGGTGTGGTG GAGGGCGCCT GTAATCCCAG 001200
001201 CTAATCAGGA AGCTGAGACA GGAGGATCGC TTGAACCCAG GAGGCGGAGG TTGCAGTGAG CCGAGATTGC TCCATTGCAC 001280
001281 TCCAGCCTGG GCGATAGAGT GAGACTCAGC CTCAAAAAAA AAAAAAAAAA AAAATTCGCC AGGTGTGGTG GTGTGCGCCT 001360
001361 ATAATCCCAG CTACTCAGGA GGCAGAGGCA CAAGAATGGC TTGAATCACT TGAACCTGGG AGGCAGAGGT TACAATGAGC 001440
001441 CGAGATGGCA CCACTGCACT CCAGCCTGGG CGACAGAGCG AGACTCCGAC TTCCCATCTT AAAAAAAAAA AAAAAAAAAA 001520
001521 AAAAGAAGTG TAAAGATGTG ATTATGTGGC AGGGGGTAAG GGTTAAAAAG AAAACAAGAA CAAGTTTTCC TCTGCTTAGC 001600
001601 CAGCTTACTT CAAGGACAGT TATAACACTG AAAAGTCGAG GCCAAAGGAA TGGGCTCCAG ACAGCCTCCT CCGGAGCAAA 001680
001681 GTTGAAAAGA AAAATTCCTT TACTGTCTCT CCTTTTCTGA ACCATTAAAT ATGACTGTTT GCCAATGGTT GTATTTAGTA 001760
001761 AGATTTGTAG ACTCTGTTTT TCTTTTGACA CAGCTGCAAG GCCAACAGCT GTGCAAAGCC ACAAGTTATG CTAAGTCAGC 001840
001841 AGTTATGCTA TAGATTACAT GACCTGTGAC TGTATCATTA ACTGCTTTTG TTTTGCTTCT GTAAGTTTGC CTATAAAAAC 001920
001921 CACACTCAGT CTTTGTTCAA TGGTCAGCTT TTCAGA