Difference between revisions of "ENST00000542089.1"

Latest revision as of 17:23, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000542089.1
Source	Gencode19
Same with	lnc-TMEM132C-2:4,NONHSAT031889
Classification	intergenic
Length	1932 nt
Genomic location	chr12+:128400017..128436097
Exon number	4
Exons	128400017..128400227,128418835..128418894,128429263..128429344,128434519..128436097
Genome context
Sequence	000001 GCATCCTCAT TTAATAGAGC TTGAAATTAC TATAATCTGT AAAGTACAGC GAGAAGAAGA AGTTTCACCT GCCTGCACAT 000080 000081 CTGTCGTTGA CTCTCCATCT GACTTGGAGG GACTCTGAGG GACCAACCTG AGCCTGAGAA GAGGCAAGAT TCCCCTTCAA 000160 000161 GGACACACTG GGAACTTACG GACCTCTTTC TCCATGGTGC AGAGCGCAGA GGCTACCTGA GAATATCCAG AGACTACAGA 000240 000241 GGTCATCAAG TTGACGCATC AATGTTTACA TGTGAACAAA CAGACGCATA ATAGCTCTTG AGCTTGCCAT TGGGAAGTGA 000320 000321 AAATCAACTG CTTGAATAAA TGTAAGGACT CAGGTAGACA TCACCTTGTG ACTCAACAGC AGCCAATAAG ATGGAAATAA 000400 000401 AGGCCATGAA GTTATCGGAT GGCATCTACA AGGAATACTT AGATGAGGAG GTGACTCTGG TAGCAATTGT TCTTTTGTCT 000480 000481 TTCTCACCTT CCTTCTTGTC CTGTCTGGGA TGCTGAAGTG ATGGCTGGTA TACAGATGCC CTGTTGTGAT GTTGAGATAA 000560 000561 ACATGAGAAT AAAAGTCGGC GATTACAGAT GGCAGAGAAG AGAGAGAAAG ATAGGATGTA GGTGGATATT GACGGAACTA 000640 000641 AGTTTCTATT GCACAAGTTC TACCACCAAC CTCTGGACTT CATGATATGT GAGGGAGAAA TAAACTCCTA TTTTAGAAGA 000720 000721 GATCTATGTT ACCTGCAACT GAACGGAATG CTTAATTGGC ACATCCTATG TGCTCCAAAC CTTCCTTAAT TTCTGTGTGT 000800 000801 AAGGCATACT TAGTCTTTAC CCATTATTCT GTTCACATTC ATTCACTTGA TCAGCCTCCC AACTCTATGG TAAAGAGTTT 000880 000881 ACTACAGTTT ACTCTATTAG TAAGGGAGAT TCTGGAGCAA GCCCCACAAA TCATAGATTG AATACCCATT CATTAAGAGA 000960 000961 GAGATTTAAA GATACTTCTA TCCAAACACA TTTTAAATTT CCAGCACCTT TGAGGTGGTG GAGGTTCATG GTGGTTGATA 001040 001041 GGGTTTAAAT GACTTGTGAT TCAAGCTCCA TATTACAATG TAACAGTGCA AAAGTTCATT TTTTTAAATT TATTTTACTT 001120 001121 TAAGTTCTGG TATACATGTG TAGAACATGC GGGTTTGTTA CATAGGTATA CATGTGCCAT GGTGGTTTGC TGCACCTATC 001200 001201 AAACCGTCAC CTAGGTTTTA AGAACCACAT GCATTAGGTA TTTGACCTAA TGCTCTCCCT CATGTTGCCC CCCAACTCCC 001280 001281 TGACAGGGCC CAGTGTGTGA TGTTCCCCTC CCTGTGTCCA TGTGTTCTCA TTGTTCAACT CCCACTTATG AGTGAGAACA 001360 001361 TGTGGTGTTT GATTTTCTGT TCCTGTGTTA GTTTGCTGAG AATGATGGCT TCCAGCTTCA TCCATGTCCC TGCAAAGGAC 001440 001441 ACGAACTCAT TCTTTTTTAT GGCTTCATAA TATTCCATGA GTCTGGATTT GGTTACAGAT AGAGCTGGAC AAGCCTTAGC 001520 001521 TATATCTAAT GGCTTTTGAC ATGTTATATC AATTTCTTAC TGCTTTTGTA AATGAATATA TTAAGAAGAA AAAATTACAA 001600 001601 ATGACCCTTT CTTCACAAAC TTTTAGGGTA ATCAAGTTCA GTTATTAAAA AATGGATGTT TGCAACATTC ATAGTAATTA 001680 001681 TTTTCAGAAA ATTAAAAATG ATTAAAAATT ATATTTTCAT CCCATTCAGA TATTATATAT TTAACTGTGA GATAATTCTC 001760 001761 AGAGATAAAT GTCAACTTTT AAAAAATGCT AAATAAATTA AATCAAAATA TCCCCTCTAA AATAAATAAA TTAGCTCCGA 001840 001841 TTATTTCTTC TTTTTAAATT TTTCCTTATA GTTGTAAAAA TAAAGTGAAC GTTTTGGCTC ATTTCCTCAT TAAAGTTTGA 001920 001921 ATTTTCCAGT CA

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@@ Line 42: / Line 42: @@
 sequence = <dnaseq>GCATCCTCATTTAATAGAGCTTGAAATTACTATAATCTGTAAAGTACAGCGAGAAGAAGAAGTTTCACCTGCCTGCACATCTGTCGTTGACTCTCCATCTGACTTGGAGGGACTCTGAGGGACCAACCTGAGCCTGAGAAGAGGCAAGATTCCCCTTCAAGGACACACTGGGAACTTACGGACCTCTTTCTCCATGGTGCAGAGCGCAGAGGCTACCTGAGAATATCCAGAGACTACAGAGGTCATCAAGTTGACGCATCAATGTTTACATGTGAACAAACAGACGCATAATAGCTCTTGAGCTTGCCATTGGGAAGTGAAAATCAACTGCTTGAATAAATGTAAGGACTCAGGTAGACATCACCTTGTGACTCAACAGCAGCCAATAAGATGGAAATAAAGGCCATGAAGTTATCGGATGGCATCTACAAGGAATACTTAGATGAGGAGGTGACTCTGGTAGCAATTGTTCTTTTGTCTTTCTCACCTTCCTTCTTGTCCTGTCTGGGATGCTGAAGTGATGGCTGGTATACAGATGCCCTGTTGTGATGTTGAGATAAACATGAGAATAAAAGTCGGCGATTACAGATGGCAGAGAAGAGAGAGAAAGATAGGATGTAGGTGGATATTGACGGAACTAAGTTTCTATTGCACAAGTTCTACCACCAACCTCTGGACTTCATGATATGTGAGGGAGAAATAAACTCCTATTTTAGAAGAGATCTATGTTACCTGCAACTGAACGGAATGCTTAATTGGCACATCCTATGTGCTCCAAACCTTCCTTAATTTCTGTGTGTAAGGCATACTTAGTCTTTACCCATTATTCTGTTCACATTCATTCACTTGATCAGCCTCCCAACTCTATGGTAAAGAGTTTACTACAGTTTACTCTATTAGTAAGGGAGATTCTGGAGCAAGCCCCACAAATCATAGATTGAATACCCATTCATTAAGAGAGAGATTTAAAGATACTTCTATCCAAACACATTTTAAATTTCCAGCACCTTTGAGGTGGTGGAGGTTCATGGTGGTTGATAGGGTTTAAATGACTTGTGATTCAAGCTCCATATTACAATGTAACAGTGCAAAAGTTCATTTTTTTAAATTTATTTTACTTTAAGTTCTGGTATACATGTGTAGAACATGCGGGTTTGTTACATAGGTATACATGTGCCATGGTGGTTTGCTGCACCTATCAAACCGTCACCTAGGTTTTAAGAACCACATGCATTAGGTATTTGACCTAATGCTCTCCCTCATGTTGCCCCCCAACTCCCTGACAGGGCCCAGTGTGTGATGTTCCCCTCCCTGTGTCCATGTGTTCTCATTGTTCAACTCCCACTTATGAGTGAGAACATGTGGTGTTTGATTTTCTGTTCCTGTGTTAGTTTGCTGAGAATGATGGCTTCCAGCTTCATCCATGTCCCTGCAAAGGACACGAACTCATTCTTTTTTATGGCTTCATAATATTCCATGAGTCTGGATTTGGTTACAGATAGAGCTGGACAAGCCTTAGCTATATCTAATGGCTTTTGACATGTTATATCAATTTCTTACTGCTTTTGTAAATGAATATATTAAGAAGAAAAAATTACAAATGACCCTTTCTTCACAAACTTTTAGGGTAATCAAGTTCAGTTATTAAAAAATGGATGTTTGCAACATTCATAGTAATTATTTTCAGAAAATTAAAAATGATTAAAAATTATATTTTCATCCCATTCAGATATTATATATTTAACTGTGAGATAATTCTCAGAGATAAATGTCAACTTTTAAAAAATGCTAAATAAATTAAATCAAAATATCCCCTCTAAAATAAATAAATTAGCTCCGATTATTTCTTCTTTTTAAATTTTTCCTTATAGTTGTAAAAATAAAGTGAACGTTTTGGCTCATTTCCTCATTAAAGTTTGAATTTTCCAGTCA</dnaseq>|
 }}
-[[Category:Intergenic]]
+[[Category:Intergenic]][[Category:lnc-TMEM132C-2]][[Category:NONHSAG012719]][[Category:ENSG00000256193.1]][[Category:Transcripts]][[Category:Transcripts]]