Difference between revisions of "ENST00000593211.1"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>AGAGAGCAAGGCGCAGTTTTTCATTGATCACCACTTTCAAGATGCTCCCAGAATCGTGCTGTCTAGGAAGCCATTTAAACTGGTGAGAAGCCATCCTCTCTTGAATGGGGGCTCCCACTGTACATCTGGCACCCACTTCACAGATTCTGGGGGATGTCAACACCAGCACTGCTGAGCTGTGTGACCTTGAGCAAGACAGTTAGCCTCTCTGAACCTCAGTGTCCTTCTCTGTAGGCTGGAGATTGATATACCTTCATTATCGGGGTATGAGAGTGTTATAAGGTGGGATGGTGGAACACGCTGACTGGTCTGGGCTATTCAAGATCCATGAACTGGAAGATGCTTTCTTATAACTCAGAGAAAAGAGATGAAAATGAATCAAAGAACAGGAAGGAGACAAGCTCAGGAGGGAGAGGTAAAGGGGACCCTTACACCAAAACACAGGCAAGAAAACAAACAAACAAACAGAACATATTTCCTGAAAAAGGCTATGTCTTTCTGTTTGAATGACAATGCATAGGACTGACTGAACTCCTCATTTTGAGTCACCCTAAGAAGGATGTGTGGAAG</dnaseq>| | sequence = <dnaseq>AGAGAGCAAGGCGCAGTTTTTCATTGATCACCACTTTCAAGATGCTCCCAGAATCGTGCTGTCTAGGAAGCCATTTAAACTGGTGAGAAGCCATCCTCTCTTGAATGGGGGCTCCCACTGTACATCTGGCACCCACTTCACAGATTCTGGGGGATGTCAACACCAGCACTGCTGAGCTGTGTGACCTTGAGCAAGACAGTTAGCCTCTCTGAACCTCAGTGTCCTTCTCTGTAGGCTGGAGATTGATATACCTTCATTATCGGGGTATGAGAGTGTTATAAGGTGGGATGGTGGAACACGCTGACTGGTCTGGGCTATTCAAGATCCATGAACTGGAAGATGCTTTCTTATAACTCAGAGAAAAGAGATGAAAATGAATCAAAGAACAGGAAGGAGACAAGCTCAGGAGGGAGAGGTAAAGGGGACCCTTACACCAAAACACAGGCAAGAAAACAAACAAACAAACAGAACATATTTCCTGAAAAAGGCTATGTCTTTCTGTTTGAATGACAATGCATAGGACTGACTGAACTCCTCATTTTGAGTCACCCTAAGAAGGATGTGTGGAAG</dnaseq>| | ||
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− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:ENSG00000267094.1]][[Category:NONHSAG025446]][[Category:Transcripts]] |
Latest revision as of 18:35, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000593211.1 |
Source |
Gencode19 |
Same with |
NONHSAT064155 |
Classification |
intergenic |
Length |
570 nt |
Genomic location |
chr19-:32413790..32436304 |
Exon number |
7 |
Exons |
32413790..32413816,32421194..32421327,32428122..32428207,32432527..32432568,32433216..32433353,32435281..32435341,32436223..32436304 |
Genome context |
|
Sequence |
000001 AGAGAGCAAG GCGCAGTTTT TCATTGATCA CCACTTTCAA GATGCTCCCA GAATCGTGCT GTCTAGGAAG CCATTTAAAC 000080
000081 TGGTGAGAAG CCATCCTCTC TTGAATGGGG GCTCCCACTG TACATCTGGC ACCCACTTCA CAGATTCTGG GGGATGTCAA 000160 000161 CACCAGCACT GCTGAGCTGT GTGACCTTGA GCAAGACAGT TAGCCTCTCT GAACCTCAGT GTCCTTCTCT GTAGGCTGGA 000240 000241 GATTGATATA CCTTCATTAT CGGGGTATGA GAGTGTTATA AGGTGGGATG GTGGAACACG CTGACTGGTC TGGGCTATTC 000320 000321 AAGATCCATG AACTGGAAGA TGCTTTCTTA TAACTCAGAG AAAAGAGATG AAAATGAATC AAAGAACAGG AAGGAGACAA 000400 000401 GCTCAGGAGG GAGAGGTAAA GGGGACCCTT ACACCAAAAC ACAGGCAAGA AAACAAACAA ACAAACAGAA CATATTTCCT 000480 000481 GAAAAAGGCT ATGTCTTTCT GTTTGAATGA CAATGCATAG GACTGACTGA ACTCCTCATT TTGAGTCACC CTAAGAAGGA 000560 000561 TGTGTGGAAG |
Predicted Small Protein
Name | ENST00000593211.1_smProtein_104:202 |
Length | 33 |
Molecular weight | 3314.6089 |
Aromaticity | 0.0 |
Instability index | 52.53125 |
Isoelectric point | 3.76678466797 |
Runs | 7 |
Runs residual | 0.0271045918367 |
Runs probability | 0.027418174477 |
Amino acid sequence | MGAPTVHLAPTSQILGDVNTSTAELCDLEQDS |
Secondary structure | LLLLEEELLLLLLEELLLLLLHHHHHHHHLLL |
PRMN | - |
PiMo | - |