Difference between revisions of "Lnc-VRK1-5:3"

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sequence = <dnaseq>CTTGCCGAGGACTTTGTCCACCAAGTGATGAAAGCATGCAAATGCCTCCGAATCAAAGATGAGGAAAACAAAAGCTCAGAAACTATCTTGGAGTCAGCAAGTAAGAAGGAGCTTAGAAAGGCTTAACATTTTCCATGCTTCTGCCTGGCTTCAGAGCCCATGCACTCTGCCTTACCACGGCAGGTGAAAGATGGCCCCAAATTCTTAGGTACATCTCCTGCCAAAAGACCCCTCCTATGGGTTCTGTGACTACTTCAATGAAAAGAATAGGGCAGAAGAGATGATGAGAACTTAACATCTGGCAGTGTCCATTTCCTGTCTTTTGAAACTTTCTGTTAAAGGCCTGAGCCACGTATGAAGTGTGAATCTTCACACCATGCAAGAGAAGCCACATGTTATTGCTCTGGTCAACAATCCCAGCTGACCCAACCAGATAGTGTATCAGGCATATGAGTAAAGCATTCTTAGATTCTTCAGTCCAGCCCTTCACCAGCAGAACACCATTCAGCAACCCTTGTCGGCATCATGTGGGACAGAAGAACCACCCAGCTGAGCCTTATCCAAATTCCTGACCACAAAATCATAAGAGAGAATGACTTCTTTCATATCGCTGAATGGAGCAACATGTTTGGCCAAGTTCCTGTCCCAGGGAGGAGAACCTTCAGCTTGCAACAAGTCCTGGCCGTTGGAGAAACCATGAGACTAGACCTTGTGTAAAGCAGCTGATTCTGCCATGGGGGAAATGCCCTTTTGTTTACTGAGCTTCTCCCACCCATGCCTTGCTCCACTTTCCTCTAGAAGCCTGAGATATTGGGAATAAGAGTCTCAGCCTCCAAGAGATGGAGAACATATCAAGAGAGTCTGGATTTCTGGGGTGATTAAGTTCACTTGATTCATTAGCCTAAGTGCTCAAGTAAATTTCAAATCACAGTGTTATGTGTGATTGTCCACGTCCTTCCTCCAAACACTCCCCACCTCCCACCCAAGGGCCCATGTAACTTGCTATTGAGAACCTTTGATTTCTTAGGTATTTGGGTGATAGGGTTTTGTTGCCTCTCCTGAAGAAAATAGTGGCAATTTGTACTCAGCTGTGGAATAAAGGAAATCATGAC</dnaseq>|
 
sequence = <dnaseq>CTTGCCGAGGACTTTGTCCACCAAGTGATGAAAGCATGCAAATGCCTCCGAATCAAAGATGAGGAAAACAAAAGCTCAGAAACTATCTTGGAGTCAGCAAGTAAGAAGGAGCTTAGAAAGGCTTAACATTTTCCATGCTTCTGCCTGGCTTCAGAGCCCATGCACTCTGCCTTACCACGGCAGGTGAAAGATGGCCCCAAATTCTTAGGTACATCTCCTGCCAAAAGACCCCTCCTATGGGTTCTGTGACTACTTCAATGAAAAGAATAGGGCAGAAGAGATGATGAGAACTTAACATCTGGCAGTGTCCATTTCCTGTCTTTTGAAACTTTCTGTTAAAGGCCTGAGCCACGTATGAAGTGTGAATCTTCACACCATGCAAGAGAAGCCACATGTTATTGCTCTGGTCAACAATCCCAGCTGACCCAACCAGATAGTGTATCAGGCATATGAGTAAAGCATTCTTAGATTCTTCAGTCCAGCCCTTCACCAGCAGAACACCATTCAGCAACCCTTGTCGGCATCATGTGGGACAGAAGAACCACCCAGCTGAGCCTTATCCAAATTCCTGACCACAAAATCATAAGAGAGAATGACTTCTTTCATATCGCTGAATGGAGCAACATGTTTGGCCAAGTTCCTGTCCCAGGGAGGAGAACCTTCAGCTTGCAACAAGTCCTGGCCGTTGGAGAAACCATGAGACTAGACCTTGTGTAAAGCAGCTGATTCTGCCATGGGGGAAATGCCCTTTTGTTTACTGAGCTTCTCCCACCCATGCCTTGCTCCACTTTCCTCTAGAAGCCTGAGATATTGGGAATAAGAGTCTCAGCCTCCAAGAGATGGAGAACATATCAAGAGAGTCTGGATTTCTGGGGTGATTAAGTTCACTTGATTCATTAGCCTAAGTGCTCAAGTAAATTTCAAATCACAGTGTTATGTGTGATTGTCCACGTCCTTCCTCCAAACACTCCCCACCTCCCACCCAAGGGCCCATGTAACTTGCTATTGAGAACCTTTGATTTCTTAGGTATTTGGGTGATAGGGTTTTGTTGCCTCTCCTGAAGAAAATAGTGGCAATTTGTACTCAGCTGTGGAATAAAGGAAATCATGAC</dnaseq>|
 
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[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-VRK1-5]][[Category:Transcripts]]

Latest revision as of 05:39, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-VRK1-5:3

Source

LNCipedia2.1

Same with

,

Classification

intergenic

Length

1112 nt

Genomic location

chr14+:97925207..97930493

Exon number

3

Exons

97925207..97925264,97928141..97928669,97929969..97930493

Genome context

Sequence
000001 CTTGCCGAGG ACTTTGTCCA CCAAGTGATG AAAGCATGCA AATGCCTCCG AATCAAAGAT GAGGAAAACA AAAGCTCAGA 000080
000081 AACTATCTTG GAGTCAGCAA GTAAGAAGGA GCTTAGAAAG GCTTAACATT TTCCATGCTT CTGCCTGGCT TCAGAGCCCA 000160
000161 TGCACTCTGC CTTACCACGG CAGGTGAAAG ATGGCCCCAA ATTCTTAGGT ACATCTCCTG CCAAAAGACC CCTCCTATGG 000240
000241 GTTCTGTGAC TACTTCAATG AAAAGAATAG GGCAGAAGAG ATGATGAGAA CTTAACATCT GGCAGTGTCC ATTTCCTGTC 000320
000321 TTTTGAAACT TTCTGTTAAA GGCCTGAGCC ACGTATGAAG TGTGAATCTT CACACCATGC AAGAGAAGCC ACATGTTATT 000400
000401 GCTCTGGTCA ACAATCCCAG CTGACCCAAC CAGATAGTGT ATCAGGCATA TGAGTAAAGC ATTCTTAGAT TCTTCAGTCC 000480
000481 AGCCCTTCAC CAGCAGAACA CCATTCAGCA ACCCTTGTCG GCATCATGTG GGACAGAAGA ACCACCCAGC TGAGCCTTAT 000560
000561 CCAAATTCCT GACCACAAAA TCATAAGAGA GAATGACTTC TTTCATATCG CTGAATGGAG CAACATGTTT GGCCAAGTTC 000640
000641 CTGTCCCAGG GAGGAGAACC TTCAGCTTGC AACAAGTCCT GGCCGTTGGA GAAACCATGA GACTAGACCT TGTGTAAAGC 000720
000721 AGCTGATTCT GCCATGGGGG AAATGCCCTT TTGTTTACTG AGCTTCTCCC ACCCATGCCT TGCTCCACTT TCCTCTAGAA 000800
000801 GCCTGAGATA TTGGGAATAA GAGTCTCAGC CTCCAAGAGA TGGAGAACAT ATCAAGAGAG TCTGGATTTC TGGGGTGATT 000880
000881 AAGTTCACTT GATTCATTAG CCTAAGTGCT CAAGTAAATT TCAAATCACA GTGTTATGTG TGATTGTCCA CGTCCTTCCT 000960
000961 CCAAACACTC CCCACCTCCC ACCCAAGGGC CCATGTAACT TGCTATTGAG AACCTTTGAT TTCTTAGGTA TTTGGGTGAT 001040
001041 AGGGTTTTGT TGCCTCTCCT GAAGAAAATA GTGGCAATTT GTACTCAGCT GTGGAATAAA GGAAATCATG AC
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