Difference between revisions of "Lnc-FOXB1-3:3"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GGCTGCTCCCCTCCTTTCCTCCCGCCACAAGCGCTCGCTGTGGTTCTGGCAGCGAAGTGCGAGACTGGGCTCGCCAGGCGGAAGTGGTTGGAGACTGCGTGTTTTCCTAGAAAGTCCTCGACCTTCGTCGGGGAGAGGAGGGGAGTGATAAATTGGAAGGCGGACAAGCGACAAGTGCGGTACTGGAAAGACCCAAACATACTTGGTTGTGACCTCAGGACTCAATAAAATAAACAGCTGGAAATAAGCAGACTAGTGTAAGAGTGAATTGAAAAGAAAACCCAAGGTCACATCTCCCAAGAAGCAGTAATGTTCCAGCAATAAGAAAAGGACAGTTTTTTGTCTTTTGCATGGTGAGCCTTATATGAATTACATCAATTTTGTCACCAATATCCATCATCAGAACATTTTGTGGCACTGTGGCTCGAACCAATGTCCAGCTTCCACACTCTCTGCTTGGAAGAGGATTACCCTTATTTGGAAGTCTCAGTTTTGAGGATTTGGGGAAAGCAGGCACGCAAGCAGACACACCTTATTCTCTACAGCATCATTTATACCTCAACTAAGTCAGCTGAACAAATGCCTGCTGAAAAGTTCTGGGAGTGGCATAGCTAAGAACCAGAAAGGCGATCTTTCTTTTGGATTAAGTCAACAGAGTCATACCCACAAGGAGAACTATCAAATATCAGATGCGAGAGGTGAAGTGGGGTTATAAGATTCTACATAACACATTGCAAATGGTCACAACAATCAAGACTATATCCATAGATGTCCCAGAAATAATATCTGACTATACAGAGCAGCATTACCAAGCCACCAAGAAGTCTGCCTAGTAATGACAATGATAACAACAGCTAACACTTAATAATCACTTGCCTTACTGACAGATTCAGAGGAAGCCATCAGTTTTTTGGGCAGAATGAAGGGACAAATGGTGAACTGGTATCCGGGATGCTGCCTAGAACCCTGTCCATTTAAGAAGACACCCAGGTGATACGCAATGCACAAAAAGCACTGGAACTCCCAGCAGGCAAGCACTGCAGTCTATAAACCCTCTATTGAGAAAGGCCATGACATGTCTACCAGGGACACAGATTTGGGAGGCAGAACACAAGACAGGGTGAGGGTGAAAAGCAATGGCTACCTGGCCACGTCAGCCAAATCAGCTCCAAAAATCAATGCGATGACAGTGGTCACAGGCAGATCACTCTCACCTTATAACCTGGGATGGCACAGACCAGACAGATTATTTCATTTTGTTTTTTCATTATTTTTATTTACTTTTTTGGAGAGAGGGTCTCACTCCATTGCCCAGGCTGGAGTCCAGTGGTGTGATCATAGCTCACTGTAACCTTGAACTCCTGGACTCAAGTGATAAACCTGCAGCTGTCTTCCCTGAGTAGCTGGGACTACAGGTACACACCACTACACCGGGCCTCTCATTTTGCTTAATTTATTTAATTAGTCAACTAATTTTGAGGGAGGGCAGATTTTGGAAGTAAAGGGCATAGATGGTTCTGTAGTATGCGGAAATCTGAAGCTTTGCTAAGATGGGATCAACATGAAGCATCTGTACATGTACAAATTAGCAAATGTTACCATGACTAACAGTAAAATGAAGAATTAAGGAAATTATAAGGTTAATTTCCTTGAAGTCTCTCAGTAGTCATTTGTGTCTATAGGTGATTTTGTATTTTACAACATTGTATTTTCTAATTTCATGAAAGGAAAGCTAACCAAATTCGTGGATTTTATTTTTTGCCTCAGCCTCAAAAAGCCTTAGGGCTGATTCAGGCCTGGTTGTAGCAATCGGCTGTCTCAAAGGCCTCCTGCATGTTTAAATAGCTTCTCTCCTGTTTATTTTGCACTGTTTTATCCTGTAAGCTGTCTCGAGGCCCTTCCAATATAAGCATGAGGATTTAAATCTTAATAAATTGAGATTTGAA</dnaseq>| | sequence = <dnaseq>GGCTGCTCCCCTCCTTTCCTCCCGCCACAAGCGCTCGCTGTGGTTCTGGCAGCGAAGTGCGAGACTGGGCTCGCCAGGCGGAAGTGGTTGGAGACTGCGTGTTTTCCTAGAAAGTCCTCGACCTTCGTCGGGGAGAGGAGGGGAGTGATAAATTGGAAGGCGGACAAGCGACAAGTGCGGTACTGGAAAGACCCAAACATACTTGGTTGTGACCTCAGGACTCAATAAAATAAACAGCTGGAAATAAGCAGACTAGTGTAAGAGTGAATTGAAAAGAAAACCCAAGGTCACATCTCCCAAGAAGCAGTAATGTTCCAGCAATAAGAAAAGGACAGTTTTTTGTCTTTTGCATGGTGAGCCTTATATGAATTACATCAATTTTGTCACCAATATCCATCATCAGAACATTTTGTGGCACTGTGGCTCGAACCAATGTCCAGCTTCCACACTCTCTGCTTGGAAGAGGATTACCCTTATTTGGAAGTCTCAGTTTTGAGGATTTGGGGAAAGCAGGCACGCAAGCAGACACACCTTATTCTCTACAGCATCATTTATACCTCAACTAAGTCAGCTGAACAAATGCCTGCTGAAAAGTTCTGGGAGTGGCATAGCTAAGAACCAGAAAGGCGATCTTTCTTTTGGATTAAGTCAACAGAGTCATACCCACAAGGAGAACTATCAAATATCAGATGCGAGAGGTGAAGTGGGGTTATAAGATTCTACATAACACATTGCAAATGGTCACAACAATCAAGACTATATCCATAGATGTCCCAGAAATAATATCTGACTATACAGAGCAGCATTACCAAGCCACCAAGAAGTCTGCCTAGTAATGACAATGATAACAACAGCTAACACTTAATAATCACTTGCCTTACTGACAGATTCAGAGGAAGCCATCAGTTTTTTGGGCAGAATGAAGGGACAAATGGTGAACTGGTATCCGGGATGCTGCCTAGAACCCTGTCCATTTAAGAAGACACCCAGGTGATACGCAATGCACAAAAAGCACTGGAACTCCCAGCAGGCAAGCACTGCAGTCTATAAACCCTCTATTGAGAAAGGCCATGACATGTCTACCAGGGACACAGATTTGGGAGGCAGAACACAAGACAGGGTGAGGGTGAAAAGCAATGGCTACCTGGCCACGTCAGCCAAATCAGCTCCAAAAATCAATGCGATGACAGTGGTCACAGGCAGATCACTCTCACCTTATAACCTGGGATGGCACAGACCAGACAGATTATTTCATTTTGTTTTTTCATTATTTTTATTTACTTTTTTGGAGAGAGGGTCTCACTCCATTGCCCAGGCTGGAGTCCAGTGGTGTGATCATAGCTCACTGTAACCTTGAACTCCTGGACTCAAGTGATAAACCTGCAGCTGTCTTCCCTGAGTAGCTGGGACTACAGGTACACACCACTACACCGGGCCTCTCATTTTGCTTAATTTATTTAATTAGTCAACTAATTTTGAGGGAGGGCAGATTTTGGAAGTAAAGGGCATAGATGGTTCTGTAGTATGCGGAAATCTGAAGCTTTGCTAAGATGGGATCAACATGAAGCATCTGTACATGTACAAATTAGCAAATGTTACCATGACTAACAGTAAAATGAAGAATTAAGGAAATTATAAGGTTAATTTCCTTGAAGTCTCTCAGTAGTCATTTGTGTCTATAGGTGATTTTGTATTTTACAACATTGTATTTTCTAATTTCATGAAAGGAAAGCTAACCAAATTCGTGGATTTTATTTTTTGCCTCAGCCTCAAAAAGCCTTAGGGCTGATTCAGGCCTGGTTGTAGCAATCGGCTGTCTCAAAGGCCTCCTGCATGTTTAAATAGCTTCTCTCCTGTTTATTTTGCACTGTTTTATCCTGTAAGCTGTCTCGAGGCCCTTCCAATATAAGCATGAGGATTTAAATCTTAATAAATTGAGATTTGAA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Antisense]] | + | [[Category:Antisense]][[Category:lnc-FOXB1-3]][[Category:Transcripts]] |
Latest revision as of 04:16, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
lnc-FOXB1-3:3 |
Source |
LNCipedia2.1 |
Same with |
, |
Classification |
antisense |
Length |
1946 nt |
Genomic location |
chr15+:60771380..60823166 |
Exon number |
6 |
Exons |
60771380..60771597,60780723..60780790,60802607..60802732,60812165..60812468,60820779..60820926,60822085..60823166 |
Genome context |
|
Sequence |
000001 GGCTGCTCCC CTCCTTTCCT CCCGCCACAA GCGCTCGCTG TGGTTCTGGC AGCGAAGTGC GAGACTGGGC TCGCCAGGCG 000080
000081 GAAGTGGTTG GAGACTGCGT GTTTTCCTAG AAAGTCCTCG ACCTTCGTCG GGGAGAGGAG GGGAGTGATA AATTGGAAGG 000160 000161 CGGACAAGCG ACAAGTGCGG TACTGGAAAG ACCCAAACAT ACTTGGTTGT GACCTCAGGA CTCAATAAAA TAAACAGCTG 000240 000241 GAAATAAGCA GACTAGTGTA AGAGTGAATT GAAAAGAAAA CCCAAGGTCA CATCTCCCAA GAAGCAGTAA TGTTCCAGCA 000320 000321 ATAAGAAAAG GACAGTTTTT TGTCTTTTGC ATGGTGAGCC TTATATGAAT TACATCAATT TTGTCACCAA TATCCATCAT 000400 000401 CAGAACATTT TGTGGCACTG TGGCTCGAAC CAATGTCCAG CTTCCACACT CTCTGCTTGG AAGAGGATTA CCCTTATTTG 000480 000481 GAAGTCTCAG TTTTGAGGAT TTGGGGAAAG CAGGCACGCA AGCAGACACA CCTTATTCTC TACAGCATCA TTTATACCTC 000560 000561 AACTAAGTCA GCTGAACAAA TGCCTGCTGA AAAGTTCTGG GAGTGGCATA GCTAAGAACC AGAAAGGCGA TCTTTCTTTT 000640 000641 GGATTAAGTC AACAGAGTCA TACCCACAAG GAGAACTATC AAATATCAGA TGCGAGAGGT GAAGTGGGGT TATAAGATTC 000720 000721 TACATAACAC ATTGCAAATG GTCACAACAA TCAAGACTAT ATCCATAGAT GTCCCAGAAA TAATATCTGA CTATACAGAG 000800 000801 CAGCATTACC AAGCCACCAA GAAGTCTGCC TAGTAATGAC AATGATAACA ACAGCTAACA CTTAATAATC ACTTGCCTTA 000880 000881 CTGACAGATT CAGAGGAAGC CATCAGTTTT TTGGGCAGAA TGAAGGGACA AATGGTGAAC TGGTATCCGG GATGCTGCCT 000960 000961 AGAACCCTGT CCATTTAAGA AGACACCCAG GTGATACGCA ATGCACAAAA AGCACTGGAA CTCCCAGCAG GCAAGCACTG 001040 001041 CAGTCTATAA ACCCTCTATT GAGAAAGGCC ATGACATGTC TACCAGGGAC ACAGATTTGG GAGGCAGAAC ACAAGACAGG 001120 001121 GTGAGGGTGA AAAGCAATGG CTACCTGGCC ACGTCAGCCA AATCAGCTCC AAAAATCAAT GCGATGACAG TGGTCACAGG 001200 001201 CAGATCACTC TCACCTTATA ACCTGGGATG GCACAGACCA GACAGATTAT TTCATTTTGT TTTTTCATTA TTTTTATTTA 001280 001281 CTTTTTTGGA GAGAGGGTCT CACTCCATTG CCCAGGCTGG AGTCCAGTGG TGTGATCATA GCTCACTGTA ACCTTGAACT 001360 001361 CCTGGACTCA AGTGATAAAC CTGCAGCTGT CTTCCCTGAG TAGCTGGGAC TACAGGTACA CACCACTACA CCGGGCCTCT 001440 001441 CATTTTGCTT AATTTATTTA ATTAGTCAAC TAATTTTGAG GGAGGGCAGA TTTTGGAAGT AAAGGGCATA GATGGTTCTG 001520 001521 TAGTATGCGG AAATCTGAAG CTTTGCTAAG ATGGGATCAA CATGAAGCAT CTGTACATGT ACAAATTAGC AAATGTTACC 001600 001601 ATGACTAACA GTAAAATGAA GAATTAAGGA AATTATAAGG TTAATTTCCT TGAAGTCTCT CAGTAGTCAT TTGTGTCTAT 001680 001681 AGGTGATTTT GTATTTTACA ACATTGTATT TTCTAATTTC ATGAAAGGAA AGCTAACCAA ATTCGTGGAT TTTATTTTTT 001760 001761 GCCTCAGCCT CAAAAAGCCT TAGGGCTGAT TCAGGCCTGG TTGTAGCAAT CGGCTGTCTC AAAGGCCTCC TGCATGTTTA 001840 001841 AATAGCTTCT CTCCTGTTTA TTTTGCACTG TTTTATCCTG TAAGCTGTCT CGAGGCCCTT CCAATATAAG CATGAGGATT 001920 001921 TAAATCTTAA TAAATTGAGA TTTGAA |