Difference between revisions of "Lnc-VSIG10-1:1"

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sequence = <dnaseq>AACAGATTGCTAACCCACCCCCAGATTTTCAGATTTTATTTTATTTATTTATTTATTTTTTTATCTGACTGATTTTCAGATTTTAAAAATCTATCCCTAGATTTTCTGGGGTAGAGTTTGAAAATTTGTGTTTCTAACAAGCTCCCAGATGACGCTGCTGCTACTGCTTCAGGGACCACATTTCAAGAACCATTGATATAACTCTAAACCATTCTTGTCTTCTTCCTATGTATTTTCCACATCAGTCAAAGTGATCTTTTCAAACCATAAATCTGGTCATTCTACTGCATAGTTTTGAAATCCATTGTCTTCCCATTGCTTTTAGGACAAGTCAAAATCCTAGAAGTCCCTACACAGTCCCCTCCTAGCCTACTCGTTCAGTGACATCTCACACTAATGCTGCCCCTACCCTCAACCCACTCTTCGCTGCACCAGCCACCATGGTCACCTTTCAGTTCCTCAAATTTATCAAGCTCCACCCTTCCCCAAGGTCTTTCCACATACTGTTTCTTCCACCAAGATGTTCTCCCTACCCCCAAGCCCTCCCTGACCACAATTTTGCTCGGTTAATTCCTACTTCTCCTCCTTGTGCAATGCGGGATTGGTTATTAGGATCTTAACTTAAATGTCACTTTCCTAAGGAAGCCTTTTCTAACTGCCTCAGCCAAGACAGATGTCTCTGGTTTCCTAACTAGAGCCTTTAATTATACATTTGTTTAATGATTATTTGAGCTACTTACTCTACTAACTGGTAAGCATCATAAGAGCACAGACCATGTTTTTGTTTGCTCACAACTGTATCCCTGTGCCCTGTACACATGAATATTTGGTAAATGAATGATTGATTCTGGAATATTTGGTTGAAGACCACTAGTGGACTTAGGAGTTCTTCCCAAAGAACTGCACTTTGATCTGAAAGCTCAAATTTCTTCAGTTCTCCTTTTACCAGTACTTACAGGTGAATCGTCTGCAGCTCCATGGACTTTTCTTCTCATAAACCTTAGTATTTCTTATTTGTAGACTTACTAAGTGTATTAAGGTTTAATAAAATTCAATATGGCGCATTGTTTTAGTATATATAAAATCATGTGTTTGAGCTCATATTCTTTATTTTTTTTTCTTTTGAGATGGAGTTTCGCTCTTGTTGCCCAAGCTGGAGTGCAATGTCATAGTCTCGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCAACTCTCCTGCTTCAGCCTCCCAAGTAGCCGAGATTACAGGCGTGCACCACCATGCCCAGCTAATTTTTTGTATTTTTAGCCTGGCCAACATGGTAAAACGACATCTCTATAAAAATACAAAATTAGCTGAGCTTGATGGCGGGCGCCTGTAATCCCAGCTACTCAGGAGGTTGAGGCAGGACAAATTGCTTGAATACAGGAGGCAGAGGTTGCAGTAAGCCGAGATCACACCACTGCACTCCAGCCTGGGCAACAGAGTAAGACTCTGTCTCAAAAAAAAATCGTAAAATAAAATAAATAGATACCTTCCTTATTTCTAACTCCACGCGTCCACTCATCCACTGGAGGCCATACTTTATGACTATGGCCACCATTTTGAGTTTTTGTAACATTGAGATATTTGGAAATTTCATGAACTCTACCTTCTAGAAGATTTTCCCACAGAACAGCATTTAAGAGTCCCCACTCAGTCCTCAAGCATACGTCAATTTTTGGCTCACCATACTCAGACTTGAGTGCCAAAGCCCACAGGCCTACACTTCTGTCTTTGAACATGCTC</dnaseq>|
 
sequence = <dnaseq>AACAGATTGCTAACCCACCCCCAGATTTTCAGATTTTATTTTATTTATTTATTTATTTTTTTATCTGACTGATTTTCAGATTTTAAAAATCTATCCCTAGATTTTCTGGGGTAGAGTTTGAAAATTTGTGTTTCTAACAAGCTCCCAGATGACGCTGCTGCTACTGCTTCAGGGACCACATTTCAAGAACCATTGATATAACTCTAAACCATTCTTGTCTTCTTCCTATGTATTTTCCACATCAGTCAAAGTGATCTTTTCAAACCATAAATCTGGTCATTCTACTGCATAGTTTTGAAATCCATTGTCTTCCCATTGCTTTTAGGACAAGTCAAAATCCTAGAAGTCCCTACACAGTCCCCTCCTAGCCTACTCGTTCAGTGACATCTCACACTAATGCTGCCCCTACCCTCAACCCACTCTTCGCTGCACCAGCCACCATGGTCACCTTTCAGTTCCTCAAATTTATCAAGCTCCACCCTTCCCCAAGGTCTTTCCACATACTGTTTCTTCCACCAAGATGTTCTCCCTACCCCCAAGCCCTCCCTGACCACAATTTTGCTCGGTTAATTCCTACTTCTCCTCCTTGTGCAATGCGGGATTGGTTATTAGGATCTTAACTTAAATGTCACTTTCCTAAGGAAGCCTTTTCTAACTGCCTCAGCCAAGACAGATGTCTCTGGTTTCCTAACTAGAGCCTTTAATTATACATTTGTTTAATGATTATTTGAGCTACTTACTCTACTAACTGGTAAGCATCATAAGAGCACAGACCATGTTTTTGTTTGCTCACAACTGTATCCCTGTGCCCTGTACACATGAATATTTGGTAAATGAATGATTGATTCTGGAATATTTGGTTGAAGACCACTAGTGGACTTAGGAGTTCTTCCCAAAGAACTGCACTTTGATCTGAAAGCTCAAATTTCTTCAGTTCTCCTTTTACCAGTACTTACAGGTGAATCGTCTGCAGCTCCATGGACTTTTCTTCTCATAAACCTTAGTATTTCTTATTTGTAGACTTACTAAGTGTATTAAGGTTTAATAAAATTCAATATGGCGCATTGTTTTAGTATATATAAAATCATGTGTTTGAGCTCATATTCTTTATTTTTTTTTCTTTTGAGATGGAGTTTCGCTCTTGTTGCCCAAGCTGGAGTGCAATGTCATAGTCTCGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCAACTCTCCTGCTTCAGCCTCCCAAGTAGCCGAGATTACAGGCGTGCACCACCATGCCCAGCTAATTTTTTGTATTTTTAGCCTGGCCAACATGGTAAAACGACATCTCTATAAAAATACAAAATTAGCTGAGCTTGATGGCGGGCGCCTGTAATCCCAGCTACTCAGGAGGTTGAGGCAGGACAAATTGCTTGAATACAGGAGGCAGAGGTTGCAGTAAGCCGAGATCACACCACTGCACTCCAGCCTGGGCAACAGAGTAAGACTCTGTCTCAAAAAAAAATCGTAAAATAAAATAAATAGATACCTTCCTTATTTCTAACTCCACGCGTCCACTCATCCACTGGAGGCCATACTTTATGACTATGGCCACCATTTTGAGTTTTTGTAACATTGAGATATTTGGAAATTTCATGAACTCTACCTTCTAGAAGATTTTCCCACAGAACAGCATTTAAGAGTCCCCACTCAGTCCTCAAGCATACGTCAATTTTTGGCTCACCATACTCAGACTTGAGTGCCAAAGCCCACAGGCCTACACTTCTGTCTTTGAACATGCTC</dnaseq>|
 
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[[Category:Intronic(S)]]
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[[Category:Intronic(S)]][[Category:lnc-VSIG10-1]][[Category:Transcripts]]

Latest revision as of 05:39, 17 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-VSIG10-1:1

Source

LNCipedia2.1

Same with

,

Classification

intronic(S)

Length

1770 nt

Genomic location

chr12-:118612199..118614556

Exon number

2

Exons

118612199..118612678,118613267..118614556

Genome context

Sequence
000001 AACAGATTGC TAACCCACCC CCAGATTTTC AGATTTTATT TTATTTATTT ATTTATTTTT TTATCTGACT GATTTTCAGA 000080
000081 TTTTAAAAAT CTATCCCTAG ATTTTCTGGG GTAGAGTTTG AAAATTTGTG TTTCTAACAA GCTCCCAGAT GACGCTGCTG 000160
000161 CTACTGCTTC AGGGACCACA TTTCAAGAAC CATTGATATA ACTCTAAACC ATTCTTGTCT TCTTCCTATG TATTTTCCAC 000240
000241 ATCAGTCAAA GTGATCTTTT CAAACCATAA ATCTGGTCAT TCTACTGCAT AGTTTTGAAA TCCATTGTCT TCCCATTGCT 000320
000321 TTTAGGACAA GTCAAAATCC TAGAAGTCCC TACACAGTCC CCTCCTAGCC TACTCGTTCA GTGACATCTC ACACTAATGC 000400
000401 TGCCCCTACC CTCAACCCAC TCTTCGCTGC ACCAGCCACC ATGGTCACCT TTCAGTTCCT CAAATTTATC AAGCTCCACC 000480
000481 CTTCCCCAAG GTCTTTCCAC ATACTGTTTC TTCCACCAAG ATGTTCTCCC TACCCCCAAG CCCTCCCTGA CCACAATTTT 000560
000561 GCTCGGTTAA TTCCTACTTC TCCTCCTTGT GCAATGCGGG ATTGGTTATT AGGATCTTAA CTTAAATGTC ACTTTCCTAA 000640
000641 GGAAGCCTTT TCTAACTGCC TCAGCCAAGA CAGATGTCTC TGGTTTCCTA ACTAGAGCCT TTAATTATAC ATTTGTTTAA 000720
000721 TGATTATTTG AGCTACTTAC TCTACTAACT GGTAAGCATC ATAAGAGCAC AGACCATGTT TTTGTTTGCT CACAACTGTA 000800
000801 TCCCTGTGCC CTGTACACAT GAATATTTGG TAAATGAATG ATTGATTCTG GAATATTTGG TTGAAGACCA CTAGTGGACT 000880
000881 TAGGAGTTCT TCCCAAAGAA CTGCACTTTG ATCTGAAAGC TCAAATTTCT TCAGTTCTCC TTTTACCAGT ACTTACAGGT 000960
000961 GAATCGTCTG CAGCTCCATG GACTTTTCTT CTCATAAACC TTAGTATTTC TTATTTGTAG ACTTACTAAG TGTATTAAGG 001040
001041 TTTAATAAAA TTCAATATGG CGCATTGTTT TAGTATATAT AAAATCATGT GTTTGAGCTC ATATTCTTTA TTTTTTTTTC 001120
001121 TTTTGAGATG GAGTTTCGCT CTTGTTGCCC AAGCTGGAGT GCAATGTCAT AGTCTCGGCT CACTGCAACC TCCACCTCCC 001200
001201 GGGTTCAAGC AACTCTCCTG CTTCAGCCTC CCAAGTAGCC GAGATTACAG GCGTGCACCA CCATGCCCAG CTAATTTTTT 001280
001281 GTATTTTTAG CCTGGCCAAC ATGGTAAAAC GACATCTCTA TAAAAATACA AAATTAGCTG AGCTTGATGG CGGGCGCCTG 001360
001361 TAATCCCAGC TACTCAGGAG GTTGAGGCAG GACAAATTGC TTGAATACAG GAGGCAGAGG TTGCAGTAAG CCGAGATCAC 001440
001441 ACCACTGCAC TCCAGCCTGG GCAACAGAGT AAGACTCTGT CTCAAAAAAA AATCGTAAAA TAAAATAAAT AGATACCTTC 001520
001521 CTTATTTCTA ACTCCACGCG TCCACTCATC CACTGGAGGC CATACTTTAT GACTATGGCC ACCATTTTGA GTTTTTGTAA 001600
001601 CATTGAGATA TTTGGAAATT TCATGAACTC TACCTTCTAG AAGATTTTCC CACAGAACAG CATTTAAGAG TCCCCACTCA 001680
001681 GTCCTCAAGC ATACGTCAAT TTTTGGCTCA CCATACTCAG ACTTGAGTGC CAAAGCCCAC AGGCCTACAC TTCTGTCTTT 001760
001761 GAACATGCTC
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