Difference between revisions of "Lnc-PTPN14-3:2"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TCAATAGGACAGAAGAGCTCCTTGGCACTGGATGCCTCCGGGTCTGGTTGAGAGAGGAATGGTTAGGAGACTGTTCTGAGGATACGCAGACATCATCCAAAGCTTCCTACATTCAGATGAGGACAGAGGTTGGGCCAGAGCTTTGTAAGCTTGTTACCTAAGGATGGTTCTGACCATGTAAGCAGATCACAGAAGCTGGAGGCAAAGGATGCCAAGATGGGAAAGCCACATAATGGAAGGATCCTGGATTTCAGAGCTGTCACTTGGAGGAGGGGCACCCAGTGAAGGTGTCTTATCTAACCCACACCATATCTTCATGAAGTGGCCATATGGATTTGATCCCTATCCTTCAGAGGTGCTCAGCCTAAGGGAACACGGATAGTAGATTAAGCACTGACCAGAGCCAGCCTTGACAATGTGCTGATGGCAACCTAGAACATAAGCAGAGGAGTATACAGGACAAGAACTTGATGGTCTCGGGAAAATGGACAACATGACTCAGGTGAAAAAGATTGATCATCAGATGTTTCTTATGTATCAACCTGATATTTAAATCCATGAAGGACAGAGACGACAAAGGCAGGTGGAATAGATAGAGAAGAGATTCAAGGTCTGAGCTCTACATTACTCAAACTGTTAGAGATTAGGAAGAAGAGGAAGACCTGGCAAAAGAATGTCCTGGGATGTAGAAAGAAAACCAGAAGCTTGTGTTCTCTGGAAACCAAATGAAGAAAGGGCTTCCAGAAGGACAGACAAAGTGTAGTGTGTCAAAGGCTCCTGAGCAATCAGAGGAGAGCACAAAGGGGCTCACAGGACTTTGGTATCTGGATCACCCAGTGACACTTCCTGATCACGAGAAACTGTCAGACCAACAGGGGCACTTTCTGAAACCAGCAGTTCTTCAGTGCCCAAATGCAACCTTGATGGTTTGATTTTGGAGGATGGCAATTCATTAACAGCACTCCCCAGTGATAAATATGAAAACCAATAAAACCCCCCACCCAAGGCAATCTCTCCCAGCTCCTCGCTTTGAGTAAAGTGAGTAACCTCCATTTCTGCCAACTCCTGTCTTGTCTGAAGCCACATTTCCCCAGCAATGTCACATATGCATTTCTTGATCCTGGTCATTTCTCCTCTTGGGAGATGAATCATAAAGAAAATGAGATCTGTGTGCCCTGGTGACTATGGATGCAAGAGTCTGCTGCCCTGGAGGGAACAGCTGGAAAAGTAGATGGTGAAGACGTGTGGGGGGGAAACAGTGGAGAAGGCATCTTTGCAGGGGATCAAGGTGACAGAGTGATTAGTTACACTGTTTTGACATGTGAGAACAGGGGGTTATAAAAATGGATACAGGAAGAGGGAGAGAAAGTAAGGACCAAAACATGAAGCCAGTCATGAATGTTTTTACATAAAAAGCAGCAGATTTACGGCAAATATGTGATGTTTCCACATTTTCTGCCTCTAGTTAGCAGGGGCAGCACAAAGAGCATTACTGTGGAGCTGAACTTTGGGTAAAAGATTAACAGCCAGTCCTTTCTCTCCAGTGTCTGCTTCCTTCTGGGCTTGCCCTGGGGGAAAAGGAGGGCTGGCATGGATATGCCTGCAGCCCTCACCCTAGATGTTCTTCCACGCCTCTCTGTTCATTCATTGCTTAGTCATTCCTCAGGCATGGATTGAGACCACTGTGTGCCCAGGACCGACCTGGCCTAGGATGGACATAGAGATGGAAAAGGCACAGGGAGCAGGTGACAGAGACAAATCAAGGTCATGGAGAATAGCAGAGTAAGATAGAAGATGAAGGCAGGAGATGGGGTTCTTGAGAAAGCGAGAGCAGGACTGACCCGTGTCTGCCTCACCTGTTATTGCTGTAGCCTCTTCTCCTTGGAGTATCCCTCCTGCTCTTGCATCACCTTAGGAACTTGGATCAGAGAGGAAAGTTACGGCCTGGATATGTTGTAGTAGGAGGGGACAAACATGTTTGGAGACAGAAATGCTTGGGGAGCGGGTGTTTTTGGGGGATGAGACTTTCCAGGTCTCTCAATTCACACTATGTAGGTAGTTCACTGCACAGCTTAAATAAGAGACAACTCTCCGGAGTGGTTGGCTCTCATCCAAAAAATGTGTTTTGGGCCTCAGATTTCCAACGGAAGGGCTGAAGCGTGACTGGCCTGATGTCAACTACTGAAGTCCACCTGCCCCTGCCCTATCAGGTGTGGAAATGCTGGGGTTCCTCTCTCAGAACCTACTTCCTGAGATGTCGAAATATACCCAAGAGTATTTCTGGGCCTTCTCCAATCCGAAACTGTTTAGTTTTTGTGTGTGTGTGCCTACTTGGCCACACTAGAAGACAGAGGTGGCCTGGGTGAAATGCAGGTTTCTAGAGGCTCTCTGACAAAGCTCAGGCCACCAGCCCCAGGCCAGCCTGTGGGTAGTCCTGGCTGACAGTCACTTCATACCTCACCTGGGCTTTTTGCCAAATTCAAAGTGTGTGTATATGTGGAGTGCTGGGTTCCCACCACTGACAGTCTGTAAGTCATTCACTTAGCTCAATTTGTCTTACTTTCTTCTGAAATTTCTTCCTTCTTGTTCTTTTTCCCAGGAGAAACCAGGAGAAGGCAGTCCTAGGGCAGTCTCCGGGCCAGCTTTCCCTAATAAGAAGGCAGAGCTCCTCTTCACCCAGACTTCAGACCTATAGAGGCAGCCTGGGGTCCCGGGATGCCCTTGCACTCAGAGATGTCCCCAGAGTCCTAGGGAAATGGAGGATAACTAGGAGGAAGCTGTTCATGGCTGGCGATGAGGTCTATACCTTCTTGTCCGTCTCAGTGCTGTCTGCTATTGAATTTTTGTGCAGATCACATTAACTTAAAGCCAGTTCTCAAGAAGCTCCCCCTGCCGCCGGCATATCCACCAGTTGCTCCCCTTTCCTGCCATTAATCAGGGTCTGCTAGTTAGAGAACAAATTCCTATTTGTCCAAACAGTTGCCAACACCCCCACCCCAAGGTAGTTAAATGAGGATGAATGGGTCATTCTTATTAAAAAATGACTTAAATTTCTCAAATTCTATTTATGTTTCTTTTACATCCCAATTTTCTATAGATTTAGTGACTCCAAATGATAAGGTCTCAAGCTCATAATAATTTATCCCTTGGGTAACACACAAGGCTTGGTGGTATTTCAGTAATATTCATGACAACAGCAGCTGTCGTGCTAATAAGGACTGATGTCACCAGAGCACTTTCTATGTGCCAAGCATGGTGCACAACACTTTACATACATTATGTCATTTAATTTTCACAAAAC</dnaseq>| | sequence = <dnaseq>TCAATAGGACAGAAGAGCTCCTTGGCACTGGATGCCTCCGGGTCTGGTTGAGAGAGGAATGGTTAGGAGACTGTTCTGAGGATACGCAGACATCATCCAAAGCTTCCTACATTCAGATGAGGACAGAGGTTGGGCCAGAGCTTTGTAAGCTTGTTACCTAAGGATGGTTCTGACCATGTAAGCAGATCACAGAAGCTGGAGGCAAAGGATGCCAAGATGGGAAAGCCACATAATGGAAGGATCCTGGATTTCAGAGCTGTCACTTGGAGGAGGGGCACCCAGTGAAGGTGTCTTATCTAACCCACACCATATCTTCATGAAGTGGCCATATGGATTTGATCCCTATCCTTCAGAGGTGCTCAGCCTAAGGGAACACGGATAGTAGATTAAGCACTGACCAGAGCCAGCCTTGACAATGTGCTGATGGCAACCTAGAACATAAGCAGAGGAGTATACAGGACAAGAACTTGATGGTCTCGGGAAAATGGACAACATGACTCAGGTGAAAAAGATTGATCATCAGATGTTTCTTATGTATCAACCTGATATTTAAATCCATGAAGGACAGAGACGACAAAGGCAGGTGGAATAGATAGAGAAGAGATTCAAGGTCTGAGCTCTACATTACTCAAACTGTTAGAGATTAGGAAGAAGAGGAAGACCTGGCAAAAGAATGTCCTGGGATGTAGAAAGAAAACCAGAAGCTTGTGTTCTCTGGAAACCAAATGAAGAAAGGGCTTCCAGAAGGACAGACAAAGTGTAGTGTGTCAAAGGCTCCTGAGCAATCAGAGGAGAGCACAAAGGGGCTCACAGGACTTTGGTATCTGGATCACCCAGTGACACTTCCTGATCACGAGAAACTGTCAGACCAACAGGGGCACTTTCTGAAACCAGCAGTTCTTCAGTGCCCAAATGCAACCTTGATGGTTTGATTTTGGAGGATGGCAATTCATTAACAGCACTCCCCAGTGATAAATATGAAAACCAATAAAACCCCCCACCCAAGGCAATCTCTCCCAGCTCCTCGCTTTGAGTAAAGTGAGTAACCTCCATTTCTGCCAACTCCTGTCTTGTCTGAAGCCACATTTCCCCAGCAATGTCACATATGCATTTCTTGATCCTGGTCATTTCTCCTCTTGGGAGATGAATCATAAAGAAAATGAGATCTGTGTGCCCTGGTGACTATGGATGCAAGAGTCTGCTGCCCTGGAGGGAACAGCTGGAAAAGTAGATGGTGAAGACGTGTGGGGGGGAAACAGTGGAGAAGGCATCTTTGCAGGGGATCAAGGTGACAGAGTGATTAGTTACACTGTTTTGACATGTGAGAACAGGGGGTTATAAAAATGGATACAGGAAGAGGGAGAGAAAGTAAGGACCAAAACATGAAGCCAGTCATGAATGTTTTTACATAAAAAGCAGCAGATTTACGGCAAATATGTGATGTTTCCACATTTTCTGCCTCTAGTTAGCAGGGGCAGCACAAAGAGCATTACTGTGGAGCTGAACTTTGGGTAAAAGATTAACAGCCAGTCCTTTCTCTCCAGTGTCTGCTTCCTTCTGGGCTTGCCCTGGGGGAAAAGGAGGGCTGGCATGGATATGCCTGCAGCCCTCACCCTAGATGTTCTTCCACGCCTCTCTGTTCATTCATTGCTTAGTCATTCCTCAGGCATGGATTGAGACCACTGTGTGCCCAGGACCGACCTGGCCTAGGATGGACATAGAGATGGAAAAGGCACAGGGAGCAGGTGACAGAGACAAATCAAGGTCATGGAGAATAGCAGAGTAAGATAGAAGATGAAGGCAGGAGATGGGGTTCTTGAGAAAGCGAGAGCAGGACTGACCCGTGTCTGCCTCACCTGTTATTGCTGTAGCCTCTTCTCCTTGGAGTATCCCTCCTGCTCTTGCATCACCTTAGGAACTTGGATCAGAGAGGAAAGTTACGGCCTGGATATGTTGTAGTAGGAGGGGACAAACATGTTTGGAGACAGAAATGCTTGGGGAGCGGGTGTTTTTGGGGGATGAGACTTTCCAGGTCTCTCAATTCACACTATGTAGGTAGTTCACTGCACAGCTTAAATAAGAGACAACTCTCCGGAGTGGTTGGCTCTCATCCAAAAAATGTGTTTTGGGCCTCAGATTTCCAACGGAAGGGCTGAAGCGTGACTGGCCTGATGTCAACTACTGAAGTCCACCTGCCCCTGCCCTATCAGGTGTGGAAATGCTGGGGTTCCTCTCTCAGAACCTACTTCCTGAGATGTCGAAATATACCCAAGAGTATTTCTGGGCCTTCTCCAATCCGAAACTGTTTAGTTTTTGTGTGTGTGTGCCTACTTGGCCACACTAGAAGACAGAGGTGGCCTGGGTGAAATGCAGGTTTCTAGAGGCTCTCTGACAAAGCTCAGGCCACCAGCCCCAGGCCAGCCTGTGGGTAGTCCTGGCTGACAGTCACTTCATACCTCACCTGGGCTTTTTGCCAAATTCAAAGTGTGTGTATATGTGGAGTGCTGGGTTCCCACCACTGACAGTCTGTAAGTCATTCACTTAGCTCAATTTGTCTTACTTTCTTCTGAAATTTCTTCCTTCTTGTTCTTTTTCCCAGGAGAAACCAGGAGAAGGCAGTCCTAGGGCAGTCTCCGGGCCAGCTTTCCCTAATAAGAAGGCAGAGCTCCTCTTCACCCAGACTTCAGACCTATAGAGGCAGCCTGGGGTCCCGGGATGCCCTTGCACTCAGAGATGTCCCCAGAGTCCTAGGGAAATGGAGGATAACTAGGAGGAAGCTGTTCATGGCTGGCGATGAGGTCTATACCTTCTTGTCCGTCTCAGTGCTGTCTGCTATTGAATTTTTGTGCAGATCACATTAACTTAAAGCCAGTTCTCAAGAAGCTCCCCCTGCCGCCGGCATATCCACCAGTTGCTCCCCTTTCCTGCCATTAATCAGGGTCTGCTAGTTAGAGAACAAATTCCTATTTGTCCAAACAGTTGCCAACACCCCCACCCCAAGGTAGTTAAATGAGGATGAATGGGTCATTCTTATTAAAAAATGACTTAAATTTCTCAAATTCTATTTATGTTTCTTTTACATCCCAATTTTCTATAGATTTAGTGACTCCAAATGATAAGGTCTCAAGCTCATAATAATTTATCCCTTGGGTAACACACAAGGCTTGGTGGTATTTCAGTAATATTCATGACAACAGCAGCTGTCGTGCTAATAAGGACTGATGTCACCAGAGCACTTTCTATGTGCCAAGCATGGTGCACAACACTTTACATACATTATGTCATTTAATTTTCACAAAAC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:lnc-PTPN14-3]][[Category:Transcripts]] |
Latest revision as of 05:01, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
Please input expression information here.
Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-PTPN14-3:2 |
| Source |
LNCipedia2.1 |
| Same with |
, |
| Classification |
intergenic |
| Length |
3301 nt |
| Genomic location |
chr1-:213992978..214139608 |
| Exon number |
5 |
| Exons |
213992978..213995776,214005865..214005965,214068006..214068086,214068737..214068861,214139414..214139608 |
| Genome context |
|
| Sequence |
000001 TCAATAGGAC AGAAGAGCTC CTTGGCACTG GATGCCTCCG GGTCTGGTTG AGAGAGGAAT GGTTAGGAGA CTGTTCTGAG 000080 000081 GATACGCAGA CATCATCCAA AGCTTCCTAC ATTCAGATGA GGACAGAGGT TGGGCCAGAG CTTTGTAAGC TTGTTACCTA 000160 000161 AGGATGGTTC TGACCATGTA AGCAGATCAC AGAAGCTGGA GGCAAAGGAT GCCAAGATGG GAAAGCCACA TAATGGAAGG 000240 000241 ATCCTGGATT TCAGAGCTGT CACTTGGAGG AGGGGCACCC AGTGAAGGTG TCTTATCTAA CCCACACCAT ATCTTCATGA 000320 000321 AGTGGCCATA TGGATTTGAT CCCTATCCTT CAGAGGTGCT CAGCCTAAGG GAACACGGAT AGTAGATTAA GCACTGACCA 000400 000401 GAGCCAGCCT TGACAATGTG CTGATGGCAA CCTAGAACAT AAGCAGAGGA GTATACAGGA CAAGAACTTG ATGGTCTCGG 000480 000481 GAAAATGGAC AACATGACTC AGGTGAAAAA GATTGATCAT CAGATGTTTC TTATGTATCA ACCTGATATT TAAATCCATG 000560 000561 AAGGACAGAG ACGACAAAGG CAGGTGGAAT AGATAGAGAA GAGATTCAAG GTCTGAGCTC TACATTACTC AAACTGTTAG 000640 000641 AGATTAGGAA GAAGAGGAAG ACCTGGCAAA AGAATGTCCT GGGATGTAGA AAGAAAACCA GAAGCTTGTG TTCTCTGGAA 000720 000721 ACCAAATGAA GAAAGGGCTT CCAGAAGGAC AGACAAAGTG TAGTGTGTCA AAGGCTCCTG AGCAATCAGA GGAGAGCACA 000800 000801 AAGGGGCTCA CAGGACTTTG GTATCTGGAT CACCCAGTGA CACTTCCTGA TCACGAGAAA CTGTCAGACC AACAGGGGCA 000880 000881 CTTTCTGAAA CCAGCAGTTC TTCAGTGCCC AAATGCAACC TTGATGGTTT GATTTTGGAG GATGGCAATT CATTAACAGC 000960 000961 ACTCCCCAGT GATAAATATG AAAACCAATA AAACCCCCCA CCCAAGGCAA TCTCTCCCAG CTCCTCGCTT TGAGTAAAGT 001040 001041 GAGTAACCTC CATTTCTGCC AACTCCTGTC TTGTCTGAAG CCACATTTCC CCAGCAATGT CACATATGCA TTTCTTGATC 001120 001121 CTGGTCATTT CTCCTCTTGG GAGATGAATC ATAAAGAAAA TGAGATCTGT GTGCCCTGGT GACTATGGAT GCAAGAGTCT 001200 001201 GCTGCCCTGG AGGGAACAGC TGGAAAAGTA GATGGTGAAG ACGTGTGGGG GGGAAACAGT GGAGAAGGCA TCTTTGCAGG 001280 001281 GGATCAAGGT GACAGAGTGA TTAGTTACAC TGTTTTGACA TGTGAGAACA GGGGGTTATA AAAATGGATA CAGGAAGAGG 001360 001361 GAGAGAAAGT AAGGACCAAA ACATGAAGCC AGTCATGAAT GTTTTTACAT AAAAAGCAGC AGATTTACGG CAAATATGTG 001440 001441 ATGTTTCCAC ATTTTCTGCC TCTAGTTAGC AGGGGCAGCA CAAAGAGCAT TACTGTGGAG CTGAACTTTG GGTAAAAGAT 001520 001521 TAACAGCCAG TCCTTTCTCT CCAGTGTCTG CTTCCTTCTG GGCTTGCCCT GGGGGAAAAG GAGGGCTGGC ATGGATATGC 001600 001601 CTGCAGCCCT CACCCTAGAT GTTCTTCCAC GCCTCTCTGT TCATTCATTG CTTAGTCATT CCTCAGGCAT GGATTGAGAC 001680 001681 CACTGTGTGC CCAGGACCGA CCTGGCCTAG GATGGACATA GAGATGGAAA AGGCACAGGG AGCAGGTGAC AGAGACAAAT 001760 001761 CAAGGTCATG GAGAATAGCA GAGTAAGATA GAAGATGAAG GCAGGAGATG GGGTTCTTGA GAAAGCGAGA GCAGGACTGA 001840 001841 CCCGTGTCTG CCTCACCTGT TATTGCTGTA GCCTCTTCTC CTTGGAGTAT CCCTCCTGCT CTTGCATCAC CTTAGGAACT 001920 001921 TGGATCAGAG AGGA |