Difference between revisions of "Lnc-ARC-1:1"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
|||
(One intermediate revision by one other user not shown) | |||
Line 42: | Line 42: | ||
sequence = <dnaseq>AGTTCAAGCTGCAGCCTTTGCTGATGACGGTCAGGAGGCCAACTGCGCCTGGGGAGCAGCGGGATCCGGGGATGGGGCTGCCCTGTGTGCTCACCTGCCTGACCTGCCCCAGGCCTCCTCCTGTCCCACCCTGCCTAATGCTCTAGAGTCCCCCTGGGCTGGCCTCAGGATTGCAAGCAGTGCGAGGGCCTGGTCTCGGCCCTGGTCTCAGCCCTATCCAGATGTCCGAGGCAGATGGACCACCCGCTGAGCGTCAGAAATGGGGCCTCCTCTCCTCCCACGCCCTCCGCGGCCACCCAGCTCTTTGAAAGCCTGCGTCTGGCTCCCAGACACCACCGAGTGCTGAGTCCTCCAGCCTGTCTAGAGCGTCCCGGAAGTAGCTGGGGGAAGGCGACGAGGCGCGGACTGGAGGAGAACCGAGTGGCCGGCACTTCCGGCCGGCGGCGGCTGCTCCGGGTGAGCAGGCCCCTGAAGTGCTGTGCCTGGAGATACCATTGTGGACCCTGGAGAGGCACCTGCTGCTTATGCGGTAAAACCTCTACCACCCCAAACCTGGTCAGTTTGAGGGGAGCCGCTGCCATAGTATCCACAGAGAAGGCCGGAGTTCCAGCCGTGTGGAGCAGCAGAGGGGAGTCTGACAGGGTCACCTCCTACACAGAGAGAATTGGCAGCTGACTGCACTGCCAGGAGCCAAGGCCTAGGTGTGTGGAGCCTGGAAGACCAGGGATACCTGAGGCAGGAGGTGCAGCGTGTGGAGTGAGAAACCCGAGAGGGACTGGGGCCTGTGCTCAGGATCAGCAGAGCAGGCAGGCAGAGTGGAGAGGGAGAGACGGAGCCCCAGAAGGGGAGCAGGAGGAGAGGGAAGTAGTGGCAGCAGCCCAGGCCAGGCGTGTGTCCTGCAAGTGCTAGGACCAGCCACCCCTCCCCATGGCCTCCAAGCCGGCTGCCGGGAAGAGCAGAGGGGAGAAGCGGAAGAGGGTGGTGCTGACACTGAAGGAGAAGATTGACATCTGCACGCGCCTGGAGAAGGGCGAGAGCCGGAAGGCACTGATGCAGGAGTACAATGTGGGCATGTCCACCCTCTACGACATCAGGGCCCACAAGGCGCAGCTGCTCCGGTTCTTCGCCAGCTCGGACTCCAACAAGGCGCTGGAGCAGCGGCGCACGCTGCACACGCCCAAGCTGGAGCACCTGGACCGCGTCCTGTACGAGTGGTTCCTGGGGAAGCGCTCCGAGGGCGTCCCCGTGTCAGGCCCCATGCTCATCGAGAAGGCCAAGGACTTCTACGAGCAGATGCAGCTCACTGAGCCCTGCGTGTTCTCCGGAGGGTGGCTTTGGCGCTTTAAGGCCAGACACGGCATTAAAAAGCTAGATGCATCCAGTGAAAAGCAGTCAGCCGACCACCAGGCCGCGGAGCAGTTCTGTGCGTTTTTCAGGAGCTTGGCTGCTGAGCACGGGCTGTCCGCCGAGCAGGTTTACAACGCTGATGAGACCGGCCTTTTCTGGCGGTGCCTGCCAAATCCCACTCCGGAAGGCGGGGCTGTGCCTGGCCCCAAGCAGGGCAAGGACCGGCTGACCGTGCTGATGTGTGCCAACGCCACGGGCTCCCACAGGCTCAAGCCCTTGGCCATCGGGAAGTGCAGCGGTCCCAGGGCTTTCAAAGGCATCCAGCACCTGCCCGTCGCCTATAAGGCCCAGGGGAATGCCTGGGTGGACAAGGAGATTTTTTCCGATTGGTTCCATCATATCTTTGTGCCCTCGGTGAGAGAGCACTTCAGAACCATAGGTTTGCCGGAAGACAGCAAAGCCGTTCTCTTGCTGGACAGCTCCCGGGCTCACCCGCAGGAGGCCGAGCTGGTGTCCAGTAACGTTTTCACCATCTTCCTGCCTGCCAGCGTGGCCTCATTGGTGCAGCCCATGGAGCAGGGCATTCGGAGAGATTTCATGAGGAACTTCATTAACCCTCCGGTCCCCCTGCAGGGCCCCCATGCCCGCTACAACATGAACGATGCCATATTCAGCGTGGCCTGTGCCTGGAACGCAGTCCCTAGCCACGTCTTCAGGCGGGCCTGGAGGAAGCTGTGGCCGTCGGTTGCGTTTGCCGAAGGCTCCTCCTCTGAGGAGGAGTTGGAGGCAGAGTGCTTCCCAGTGAAGCCCCACAACAAGTCCTTTGCACACATCCTGGAGCTTGTGAAGGAAGGCTCCTCCTGCCCGGGCCAGCTTCGCCAGCGCCAGGCCGCCAGCTGGGGGGTAGCGGGAAGGGAGGCAGAAGGGGGACGGCCCCCTGCTGCCACGTCGCCAGCAGAGGTTGTGTGTGGAGTTCAGAAAAGACTCCAAAAGCTGACCAGGACGGCGGAGGAGATCCTGGTGAGGGCGAGGAGGTGGCCTGGGAGCAGGCGGCCGTGGCCTTTGACGCAGTCCTGCGCTTTGCGGAGCGGCAGCCATGCTTCAGTGCGCAGGAAGTGGGGCAGCTGCGGGCGCTGCGTGCCGTGTTCCGGAGCCAGCAGCAGGAGACTGTGGGCCTTGAGGATGTGGTAGTGACCTCACCAGAGGAGTTGGCAATTCCTAAGTGCTGCCTGGAGGCCTCTACAGAGACATAATGTTGGAGAACTTCTGCCACATGGCAGTGCTGGGTAAGACCCCTCTGTCCCCACCAGTGCCCTTGAGGTTATGGGTGTTGGTAGGTCTGTGGCCTCCATTTCCATGACGATGGTGTTAAGGACTGCATGTTTGTGTCCCCCCCCAAAGTTTATATGTTGAAACCCTGACCCCCAGGAGGGTGGTATTAGGAGGTGGGGCCTTTGGGAGGTGACTAGGCTTAGGTGAGATCGTGAGGGTGGGGCTCGCCGATGAGATCGAGTCCTTATAAGAAAAGGAAGGAACTAGAGCGAGGTCACTTTGTGCTGTGTGAGCATACAAGAAAACTGCCATCTTCAAGCTGGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTGGAAGGCCAAGGCATTAGGATTGCATGAGTCCAGGAGTTCGAGACCAGCCTAGGCATGATAAGACCTTATTGCTAAAAAAAAAAAAAGGAAATAAAATAGAAAATTGCCATCTG</dnaseq>| | sequence = <dnaseq>AGTTCAAGCTGCAGCCTTTGCTGATGACGGTCAGGAGGCCAACTGCGCCTGGGGAGCAGCGGGATCCGGGGATGGGGCTGCCCTGTGTGCTCACCTGCCTGACCTGCCCCAGGCCTCCTCCTGTCCCACCCTGCCTAATGCTCTAGAGTCCCCCTGGGCTGGCCTCAGGATTGCAAGCAGTGCGAGGGCCTGGTCTCGGCCCTGGTCTCAGCCCTATCCAGATGTCCGAGGCAGATGGACCACCCGCTGAGCGTCAGAAATGGGGCCTCCTCTCCTCCCACGCCCTCCGCGGCCACCCAGCTCTTTGAAAGCCTGCGTCTGGCTCCCAGACACCACCGAGTGCTGAGTCCTCCAGCCTGTCTAGAGCGTCCCGGAAGTAGCTGGGGGAAGGCGACGAGGCGCGGACTGGAGGAGAACCGAGTGGCCGGCACTTCCGGCCGGCGGCGGCTGCTCCGGGTGAGCAGGCCCCTGAAGTGCTGTGCCTGGAGATACCATTGTGGACCCTGGAGAGGCACCTGCTGCTTATGCGGTAAAACCTCTACCACCCCAAACCTGGTCAGTTTGAGGGGAGCCGCTGCCATAGTATCCACAGAGAAGGCCGGAGTTCCAGCCGTGTGGAGCAGCAGAGGGGAGTCTGACAGGGTCACCTCCTACACAGAGAGAATTGGCAGCTGACTGCACTGCCAGGAGCCAAGGCCTAGGTGTGTGGAGCCTGGAAGACCAGGGATACCTGAGGCAGGAGGTGCAGCGTGTGGAGTGAGAAACCCGAGAGGGACTGGGGCCTGTGCTCAGGATCAGCAGAGCAGGCAGGCAGAGTGGAGAGGGAGAGACGGAGCCCCAGAAGGGGAGCAGGAGGAGAGGGAAGTAGTGGCAGCAGCCCAGGCCAGGCGTGTGTCCTGCAAGTGCTAGGACCAGCCACCCCTCCCCATGGCCTCCAAGCCGGCTGCCGGGAAGAGCAGAGGGGAGAAGCGGAAGAGGGTGGTGCTGACACTGAAGGAGAAGATTGACATCTGCACGCGCCTGGAGAAGGGCGAGAGCCGGAAGGCACTGATGCAGGAGTACAATGTGGGCATGTCCACCCTCTACGACATCAGGGCCCACAAGGCGCAGCTGCTCCGGTTCTTCGCCAGCTCGGACTCCAACAAGGCGCTGGAGCAGCGGCGCACGCTGCACACGCCCAAGCTGGAGCACCTGGACCGCGTCCTGTACGAGTGGTTCCTGGGGAAGCGCTCCGAGGGCGTCCCCGTGTCAGGCCCCATGCTCATCGAGAAGGCCAAGGACTTCTACGAGCAGATGCAGCTCACTGAGCCCTGCGTGTTCTCCGGAGGGTGGCTTTGGCGCTTTAAGGCCAGACACGGCATTAAAAAGCTAGATGCATCCAGTGAAAAGCAGTCAGCCGACCACCAGGCCGCGGAGCAGTTCTGTGCGTTTTTCAGGAGCTTGGCTGCTGAGCACGGGCTGTCCGCCGAGCAGGTTTACAACGCTGATGAGACCGGCCTTTTCTGGCGGTGCCTGCCAAATCCCACTCCGGAAGGCGGGGCTGTGCCTGGCCCCAAGCAGGGCAAGGACCGGCTGACCGTGCTGATGTGTGCCAACGCCACGGGCTCCCACAGGCTCAAGCCCTTGGCCATCGGGAAGTGCAGCGGTCCCAGGGCTTTCAAAGGCATCCAGCACCTGCCCGTCGCCTATAAGGCCCAGGGGAATGCCTGGGTGGACAAGGAGATTTTTTCCGATTGGTTCCATCATATCTTTGTGCCCTCGGTGAGAGAGCACTTCAGAACCATAGGTTTGCCGGAAGACAGCAAAGCCGTTCTCTTGCTGGACAGCTCCCGGGCTCACCCGCAGGAGGCCGAGCTGGTGTCCAGTAACGTTTTCACCATCTTCCTGCCTGCCAGCGTGGCCTCATTGGTGCAGCCCATGGAGCAGGGCATTCGGAGAGATTTCATGAGGAACTTCATTAACCCTCCGGTCCCCCTGCAGGGCCCCCATGCCCGCTACAACATGAACGATGCCATATTCAGCGTGGCCTGTGCCTGGAACGCAGTCCCTAGCCACGTCTTCAGGCGGGCCTGGAGGAAGCTGTGGCCGTCGGTTGCGTTTGCCGAAGGCTCCTCCTCTGAGGAGGAGTTGGAGGCAGAGTGCTTCCCAGTGAAGCCCCACAACAAGTCCTTTGCACACATCCTGGAGCTTGTGAAGGAAGGCTCCTCCTGCCCGGGCCAGCTTCGCCAGCGCCAGGCCGCCAGCTGGGGGGTAGCGGGAAGGGAGGCAGAAGGGGGACGGCCCCCTGCTGCCACGTCGCCAGCAGAGGTTGTGTGTGGAGTTCAGAAAAGACTCCAAAAGCTGACCAGGACGGCGGAGGAGATCCTGGTGAGGGCGAGGAGGTGGCCTGGGAGCAGGCGGCCGTGGCCTTTGACGCAGTCCTGCGCTTTGCGGAGCGGCAGCCATGCTTCAGTGCGCAGGAAGTGGGGCAGCTGCGGGCGCTGCGTGCCGTGTTCCGGAGCCAGCAGCAGGAGACTGTGGGCCTTGAGGATGTGGTAGTGACCTCACCAGAGGAGTTGGCAATTCCTAAGTGCTGCCTGGAGGCCTCTACAGAGACATAATGTTGGAGAACTTCTGCCACATGGCAGTGCTGGGTAAGACCCCTCTGTCCCCACCAGTGCCCTTGAGGTTATGGGTGTTGGTAGGTCTGTGGCCTCCATTTCCATGACGATGGTGTTAAGGACTGCATGTTTGTGTCCCCCCCCAAAGTTTATATGTTGAAACCCTGACCCCCAGGAGGGTGGTATTAGGAGGTGGGGCCTTTGGGAGGTGACTAGGCTTAGGTGAGATCGTGAGGGTGGGGCTCGCCGATGAGATCGAGTCCTTATAAGAAAAGGAAGGAACTAGAGCGAGGTCACTTTGTGCTGTGTGAGCATACAAGAAAACTGCCATCTTCAAGCTGGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTGGAAGGCCAAGGCATTAGGATTGCATGAGTCCAGGAGTTCGAGACCAGCCTAGGCATGATAAGACCTTATTGCTAAAAAAAAAAAAAGGAAATAAAATAGAAAATTGCCATCTG</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]] | + | [[Category:Sense]][[Category:lnc-ARC-1]][[Category:Transcripts]] |
Latest revision as of 03:38, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
lnc-ARC-1:1 |
Source |
LNCipedia2.1 |
Same with |
, |
Classification |
sense |
Length |
3088 nt |
Genomic location |
chr8-:143739779..143763386 |
Exon number |
4 |
Exons |
143739779..143740356,143745895..143747939,143751350..143751550,143763123..143763386 |
Genome context |
|
Sequence |
000001 AGTTCAAGCT GCAGCCTTTG CTGATGACGG TCAGGAGGCC AACTGCGCCT GGGGAGCAGC GGGATCCGGG GATGGGGCTG 000080 000081 CCCTGTGTGC TCACCTGCCT GACCTGCCCC AGGCCTCCTC CTGTCCCACC CTGCCTAATG CTCTAGAGTC CCCCTGGGCT 000160 000161 GGCCTCAGGA TTGCAAGCAG TGCGAGGGCC TGGTCTCGGC CCTGGTCTCA GCCCTATCCA GATGTCCGAG GCAGATGGAC 000240 000241 CACCCGCTGA GCGTCAGAAA TGGGGCCTCC TCTCCTCCCA CGCCCTCCGC GGCCACCCAG CTCTTTGAAA GCCTGCGTCT 000320 000321 GGCTCCCAGA CACCACCGAG TGCTGAGTCC TCCAGCCTGT CTAGAGCGTC CCGGAAGTAG CTGGGGGAAG GCGACGAGGC 000400 000401 GCGGACTGGA GGAGAACCGA GTGGCCGGCA CTTCCGGCCG GCGGCGGCTG CTCCGGGTGA GCAGGCCCCT GAAGTGCTGT 000480 000481 GCCTGGAGAT ACCATTGTGG ACCCTGGAGA GGCACCTGCT GCTTATGCGG TAAAACCTCT ACCACCCCAA ACCTGGTCAG 000560 000561 TTTGAGGGGA GCCGCTGCCA TAGTATCCAC AGAGAAGGCC GGAGTTCCAG CCGTGTGGAG CAGCAGAGGG GAGTCTGACA 000640 000641 GGGTCACCTC CTACACAGAG AGAATTGGCA GCTGACTGCA CTGCCAGGAG CCAAGGCCTA GGTGTGTGGA GCCTGGAAGA 000720 000721 CCAGGGATAC CTGAGGCAGG AGGTGCAGCG TGTGGAGTGA GAAACCCGAG AGGGACTGGG GCCTGTGCTC AGGATCAGCA 000800 000801 GAGCAGGCAG GCAGAGTGGA GAGGGAGAGA CGGAGCCCCA GAAGGGGAGC AGGAGGAGAG GGAAGTAGTG GCAGCAGCCC 000880 000881 AGGCCAGGCG TGTGTCCTGC AAGTGCTAGG ACCAGCCACC CCTCCCCATG GCCTCCAAGC CGGCTGCCGG GAAGAGCAGA 000960 000961 GGGGAGAAGC GGAAGAGGGT GGTGCTGACA CTGAAGGAGA AGATTGACAT CTGCACGCGC CTGGAGAAGG GCGAGAGCCG 001040 001041 GAAGGCACTG ATGCAGGAGT ACAATGTGGG CATGTCCACC CTCTACGACA TCAGGGCCCA CAAGGCGCAG CTGCTCCGGT 001120 001121 TCTTCGCCAG CTCGGACTCC AACAAGGCGC TGGAGCAGCG GCGCACGCTG CACACGCCCA AGCTGGAGCA CCTGGACCGC 001200 001201 GTCCTGTACG AGTGGTTCCT GGGGAAGCGC TCCGAGGGCG TCCCCGTGTC AGGCCCCATG CTCATCGAGA AGGCCAAGGA 001280 001281 CTTCTACGAG CAGATGCAGC TCACTGAGCC CTGCGTGTTC TCCGGAGGGT GGCTTTGGCG CTTTAAGGCC AGACACGGCA 001360 001361 TTAAAAAGCT AGATGCATCC AGTGAAAAGC AGTCAGCCGA CCACCAGGCC GCGGAGCAGT TCTGTGCGTT TTTCAGGAGC 001440 001441 TTGGCTGCTG AGCACGGGCT GTCCGCCGAG CAGGTTTACA ACGCTGATGA GACCGGCCTT TTCTGGCGGT GCCTGCCAAA 001520 001521 TCCCACTCCG GAAGGCGGGG CTGTGCCTGG CCCCAAGCAG GGCAAGGACC GGCTGACCGT GCTGATGTGT GCCAACGCCA 001600 001601 CGGGCTCCCA CAGGCTCAAG CCCTTGGCCA TCGGGAAGTG CAGCGGTCCC AGGGCTTTCA AAGGCATCCA GCACCTGCCC 001680 001681 GTCGCCTATA AGGCCCAGGG GAATGCCTGG GTGGACAAGG AGATTTTTTC CGATTGGTTC CATCATATCT TTGTGCCCTC 001760 001761 GGTGAGAGAG CACTTCAGAA CCATAGGTTT GCCGGAAGAC AGCAAAGCCG TTCTCTTGCT GGACAGCTCC CGGGCTCACC 001840 001841 CGCAGGAGGC CGAGCTGGTG TCCAGTAACG TTTTCACCAT CTTCCTGCCT GCCAGCGTGG CCTCATTGGT GCAGCCCATG 001920 001921 GAGCAGGGCA TTCGGAGAGA TTTCATGAGG |