Difference between revisions of "Lnc-PPP3CC-1:2"

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sequence = <dnaseq>CAAAAAAAAAAAAAAAAAAAAAAAAGAATTTTCATCCTGACCAATCTGGGTGACCAATCAATTAAATTGGTTTAGGAAGAGCTTGCCCTAGATTGGTTGATTTCATAATTTTTCTTTTTATTAATTATTGGGTTTTTCTCTCTGATCTCTGCATTGAAAATTATTTCCTAAGCCATAAAGACTTGTTGAGGTACCATTCTAGAATCCCCAATATTTATTCTAGTTGTTATAGTAACAGTGGAACCCAAGTTTCTCCTAAAGCATTACCCAGCTTTCCTTGCCCAGGCAGAAAAGATGGCAGAGGGAGGGTGAACCCAGGGCCCATCTGTGGGTATGGGCTCCAATTTCCTAAATTGTTTGTGGTTATAACCATGGCTTCCACCTTGTCTGGCACCGGGTCCACATCTTTTCTGAGACCTGCTAGAAGAGCTGACAGCCACTTGTTTGTTTCATCTTTCCTGAGAACTAAGAGAGGTTCACCCAGCTCAGTTCTTCTCAAAGACACCCCGTCTGTGCATTGTGCTTGTTTGCTCATCCATGAAAAGAGGAAGAGAGAACAGCCGTGGATGTGATGTCAGTATCAAAACTTCCTTGAGGACAGGCGGGATAAATTGGGCAAACGGCTGAGTTCTCCCGCAGCCTTTGGGAGATTGGCCCTGAGAACCCAGAATAGATGCCCATTATACATCATGCGTGTGCTATGGAAAGGTCTGTGCCAGGCAAGCCTGAGAGCCTAATTCGCTATTCCTATGGGGTTCCATGCACCCATCCTGGCTGTCAGGCCCCAATACCCATCATACTTGACCTGTACTGGGTATTTTTTCACTCAGATCCCTCACTCTACAGTGACTCTACCAGAAATCTTGAATTCCAGATGAGCCACGTCATGCCATTGTCAGCATAGGAGGCCCTTTGAAGCCCCAAAATGGGTCATTTGCACTCCCTTCTTCTGCCTGCTCCTGTTCCCATGAGTGGTTGGCATGGAAAGGGCCATCAGTAGAACTTGGCTGGCAACATTTGCAGGAGCAGGAATCAACAGAGGACCCAGGAGAAAGGGATGGAGCCCAGGGCATGAAACATAGTCCAGATTCCTGCTGGTCAGAGCCCTAGAGAATAAGAGAAGCTTGCTGCTGGTGAGGGGGTATGGCCAGGATTCCTGGAGTCGGAAGAGCTTCAGCTTCACCATCTTGGGAGAAGAAGGAAGAAAGTGAAAGCGATGTGGTCCTTCTTAGTCCCAAGGACCCTGACAGCTTTCACATGTGATGTTTCAAGGCAACGGGGAGAGCTTCTTTACCAGAACGAGGGAGAAGATAAGACTAAAGCAGTAATGGTGGTAGGGACTGAAAATCACTTAGTCTTTTCTCTACTCTCTTTCTTTCCAAACTTTGAGTTGAGTGGTGAGCTTGGAAAACACTCCAAAACTCCTCGTGGCCTCTGGCACCAGTCTGACACCCAGTAGGAATGCAGGAGATTACGTTAGTTTTCATAATTTAGCATTGATCACTCCCAGCTCGTAGCTAAAGTTGATCAGTAACTGTTGGTTGGTTGGCTGGTTTGGGGCTTGGGGATCCCTGAGCCAACTCAAGGGCCAGAAAGGATTCCAGAGTGTTTCCACGGTCCTTCAATGTTCCTTAAGCATTCCCACTTTCTGAAGTGCCATACAGAGGCTTGGGGCAGAGACAGGGAGAGGGGATGACCAGAATGGATGGGGAGCCGGAAGGGCCGGGGCTCTGGGGACCCAGCTCAGAGCAGCGAGAACAGCGGAAAAGCAGGCAGATCAAAACAAACACAGTGTCTGGGAACACCAAGACCCTCCTAATCCCATCCCCGCCAAAGGGACCCCACCCTTATCCTCTTTAGGGGCGCGGC</dnaseq>|
 
sequence = <dnaseq>CAAAAAAAAAAAAAAAAAAAAAAAAGAATTTTCATCCTGACCAATCTGGGTGACCAATCAATTAAATTGGTTTAGGAAGAGCTTGCCCTAGATTGGTTGATTTCATAATTTTTCTTTTTATTAATTATTGGGTTTTTCTCTCTGATCTCTGCATTGAAAATTATTTCCTAAGCCATAAAGACTTGTTGAGGTACCATTCTAGAATCCCCAATATTTATTCTAGTTGTTATAGTAACAGTGGAACCCAAGTTTCTCCTAAAGCATTACCCAGCTTTCCTTGCCCAGGCAGAAAAGATGGCAGAGGGAGGGTGAACCCAGGGCCCATCTGTGGGTATGGGCTCCAATTTCCTAAATTGTTTGTGGTTATAACCATGGCTTCCACCTTGTCTGGCACCGGGTCCACATCTTTTCTGAGACCTGCTAGAAGAGCTGACAGCCACTTGTTTGTTTCATCTTTCCTGAGAACTAAGAGAGGTTCACCCAGCTCAGTTCTTCTCAAAGACACCCCGTCTGTGCATTGTGCTTGTTTGCTCATCCATGAAAAGAGGAAGAGAGAACAGCCGTGGATGTGATGTCAGTATCAAAACTTCCTTGAGGACAGGCGGGATAAATTGGGCAAACGGCTGAGTTCTCCCGCAGCCTTTGGGAGATTGGCCCTGAGAACCCAGAATAGATGCCCATTATACATCATGCGTGTGCTATGGAAAGGTCTGTGCCAGGCAAGCCTGAGAGCCTAATTCGCTATTCCTATGGGGTTCCATGCACCCATCCTGGCTGTCAGGCCCCAATACCCATCATACTTGACCTGTACTGGGTATTTTTTCACTCAGATCCCTCACTCTACAGTGACTCTACCAGAAATCTTGAATTCCAGATGAGCCACGTCATGCCATTGTCAGCATAGGAGGCCCTTTGAAGCCCCAAAATGGGTCATTTGCACTCCCTTCTTCTGCCTGCTCCTGTTCCCATGAGTGGTTGGCATGGAAAGGGCCATCAGTAGAACTTGGCTGGCAACATTTGCAGGAGCAGGAATCAACAGAGGACCCAGGAGAAAGGGATGGAGCCCAGGGCATGAAACATAGTCCAGATTCCTGCTGGTCAGAGCCCTAGAGAATAAGAGAAGCTTGCTGCTGGTGAGGGGGTATGGCCAGGATTCCTGGAGTCGGAAGAGCTTCAGCTTCACCATCTTGGGAGAAGAAGGAAGAAAGTGAAAGCGATGTGGTCCTTCTTAGTCCCAAGGACCCTGACAGCTTTCACATGTGATGTTTCAAGGCAACGGGGAGAGCTTCTTTACCAGAACGAGGGAGAAGATAAGACTAAAGCAGTAATGGTGGTAGGGACTGAAAATCACTTAGTCTTTTCTCTACTCTCTTTCTTTCCAAACTTTGAGTTGAGTGGTGAGCTTGGAAAACACTCCAAAACTCCTCGTGGCCTCTGGCACCAGTCTGACACCCAGTAGGAATGCAGGAGATTACGTTAGTTTTCATAATTTAGCATTGATCACTCCCAGCTCGTAGCTAAAGTTGATCAGTAACTGTTGGTTGGTTGGCTGGTTTGGGGCTTGGGGATCCCTGAGCCAACTCAAGGGCCAGAAAGGATTCCAGAGTGTTTCCACGGTCCTTCAATGTTCCTTAAGCATTCCCACTTTCTGAAGTGCCATACAGAGGCTTGGGGCAGAGACAGGGAGAGGGGATGACCAGAATGGATGGGGAGCCGGAAGGGCCGGGGCTCTGGGGACCCAGCTCAGAGCAGCGAGAACAGCGGAAAAGCAGGCAGATCAAAACAAACACAGTGTCTGGGAACACCAAGACCCTCCTAATCCCATCCCCGCCAAAGGGACCCCACCCTTATCCTCTTTAGGGGCGCGGC</dnaseq>|
 
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[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-PPP3CC-1]][[Category:NONHSAG049724]][[Category:Transcripts]]

Latest revision as of 04:59, 17 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-PPP3CC-1:2

Source

LNCipedia2.1

Same with

NONHSAT125481

Classification

intergenic

Length

1869 nt

Genomic location

chr8+:22402216..22408678

Exon number

4

Exons

22402216..22402642,22405227..22405896,22407419..22407571,22408060..22408678

Genome context

Sequence
000001 CAAAAAAAAA AAAAAAAAAA AAAAAGAATT TTCATCCTGA CCAATCTGGG TGACCAATCA ATTAAATTGG TTTAGGAAGA 000080
000081 GCTTGCCCTA GATTGGTTGA TTTCATAATT TTTCTTTTTA TTAATTATTG GGTTTTTCTC TCTGATCTCT GCATTGAAAA 000160
000161 TTATTTCCTA AGCCATAAAG ACTTGTTGAG GTACCATTCT AGAATCCCCA ATATTTATTC TAGTTGTTAT AGTAACAGTG 000240
000241 GAACCCAAGT TTCTCCTAAA GCATTACCCA GCTTTCCTTG CCCAGGCAGA AAAGATGGCA GAGGGAGGGT GAACCCAGGG 000320
000321 CCCATCTGTG GGTATGGGCT CCAATTTCCT AAATTGTTTG TGGTTATAAC CATGGCTTCC ACCTTGTCTG GCACCGGGTC 000400
000401 CACATCTTTT CTGAGACCTG CTAGAAGAGC TGACAGCCAC TTGTTTGTTT CATCTTTCCT GAGAACTAAG AGAGGTTCAC 000480
000481 CCAGCTCAGT TCTTCTCAAA GACACCCCGT CTGTGCATTG TGCTTGTTTG CTCATCCATG AAAAGAGGAA GAGAGAACAG 000560
000561 CCGTGGATGT GATGTCAGTA TCAAAACTTC CTTGAGGACA GGCGGGATAA ATTGGGCAAA CGGCTGAGTT CTCCCGCAGC 000640
000641 CTTTGGGAGA TTGGCCCTGA GAACCCAGAA TAGATGCCCA TTATACATCA TGCGTGTGCT ATGGAAAGGT CTGTGCCAGG 000720
000721 CAAGCCTGAG AGCCTAATTC GCTATTCCTA TGGGGTTCCA TGCACCCATC CTGGCTGTCA GGCCCCAATA CCCATCATAC 000800
000801 TTGACCTGTA CTGGGTATTT TTTCACTCAG ATCCCTCACT CTACAGTGAC TCTACCAGAA ATCTTGAATT CCAGATGAGC 000880
000881 CACGTCATGC CATTGTCAGC ATAGGAGGCC CTTTGAAGCC CCAAAATGGG TCATTTGCAC TCCCTTCTTC TGCCTGCTCC 000960
000961 TGTTCCCATG AGTGGTTGGC ATGGAAAGGG CCATCAGTAG AACTTGGCTG GCAACATTTG CAGGAGCAGG AATCAACAGA 001040
001041 GGACCCAGGA GAAAGGGATG GAGCCCAGGG CATGAAACAT AGTCCAGATT CCTGCTGGTC AGAGCCCTAG AGAATAAGAG 001120
001121 AAGCTTGCTG CTGGTGAGGG GGTATGGCCA GGATTCCTGG AGTCGGAAGA GCTTCAGCTT CACCATCTTG GGAGAAGAAG 001200
001201 GAAGAAAGTG AAAGCGATGT GGTCCTTCTT AGTCCCAAGG ACCCTGACAG CTTTCACATG TGATGTTTCA AGGCAACGGG 001280
001281 GAGAGCTTCT TTACCAGAAC GAGGGAGAAG ATAAGACTAA AGCAGTAATG GTGGTAGGGA CTGAAAATCA CTTAGTCTTT 001360
001361 TCTCTACTCT CTTTCTTTCC AAACTTTGAG TTGAGTGGTG AGCTTGGAAA ACACTCCAAA ACTCCTCGTG GCCTCTGGCA 001440
001441 CCAGTCTGAC ACCCAGTAGG AATGCAGGAG ATTACGTTAG TTTTCATAAT TTAGCATTGA TCACTCCCAG CTCGTAGCTA 001520
001521 AAGTTGATCA GTAACTGTTG GTTGGTTGGC TGGTTTGGGG CTTGGGGATC CCTGAGCCAA CTCAAGGGCC AGAAAGGATT 001600
001601 CCAGAGTGTT TCCACGGTCC TTCAATGTTC CTTAAGCATT CCCACTTTCT GAAGTGCCAT ACAGAGGCTT GGGGCAGAGA 001680
001681 CAGGGAGAGG GGATGACCAG AATGGATGGG GAGCCGGAAG GGCCGGGGCT CTGGGGACCC AGCTCAGAGC AGCGAGAACA 001760
001761 GCGGAAAAGC AGGCAGATCA AAACAAACAC AGTGTCTGGG AACACCAAGA CCCTCCTAAT CCCATCCCCG CCAAAGGGAC 001840
001841 CCCACCCTTA TCCTCTTTAG GGGCGCGGC
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