Difference between revisions of "Lnc-KCNA5-3:3"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CAGATGCTTTGCAGGACAACAGAAGTGGGATCATGGGGACCTCTCTGTGGGTTCACCCGGTCCTGTTGTGCTTGACCCCGGCCCTGAGTCAGTCACCACTCCCCATGGCCTTCATGCCTTACCTGGACAGTGAGAGGATCAGATGAGCGAAGAGGTTCCACAGTCTGAGTGCTCGGGAGAATGACCTGGGAGTCTTTTAAAAATTCAGTTTCCTTGGCTTCTTATCCTGAAAATTCAGTCAGTAGACAAGGAGCACAACCCAGGAATCTGTATTTGTCACAATCAGCTGTAGTGATTTTGATGAGCCCAAGTATTCTCTAGGGTCCTACCAGCCTGGCACTCGGGCACCCTCTTGCTCCATGGGTGAAAGCTCGAGAGATAATAGAGAGATAATAGGCTGGAACAGAATTTCAGTGGAAGGGTGGGGAGGGAGGCAGAGCTTCTCAGGCACAGGGATGTGCAGCTGGGAGAGGTGCAATGACCGAACCTTTTTTACCTATTCTCTGAGTCCTTGTTGGTTTTTATTGCTAACGTCATATGAGATTGTTACATTGTCTTGGCTGTGCCTGTGTGTCACATATTATGCTTTCTCACCTAACCCCAGTAAAATCCCACCTTCATTGATCAAAACAGGTTGTTATCATATGGACGCTCAAAATATTTTTATGCACCTTCTCAGTCTGCAGAGAATTCCACTGCAAACAGCTTATAAGGTCCATGTGTTTGGCTGTAGGTTCTTCCTCAAACTGGCTGCTTCGTAGACAAGCAGGTGCCTCGGGGACTGTGTCTTCACATAAGTCATGGTCTGTTTTCCATGGGGAGGCTGCAAGAGCTAGGGGGACAGAGGTGACAATGCAGAAGATGGAACAAAGTAACAGCACAATGGGAGCATGCAGAGGCCCGGGGATAGGTCTGGGTGTTAGGAGGACAACCTGGCCCCACTGGCACTCTGAAGGACTGCGTTCCCCATTGCATGAGGGAAGAAACTGAGGGTGGAGAGGCTCCAGGACAGAGCAGGATGGTGCTGGTGTTGAACTCTGAGACGACGTGACTACAATGCCTGTGCCCTTTGCTGGGAGGCTAATCAGAATCCAGGAACGAGAGGCTGGGCAGAAACCAGGCCAGGGTGCATCCCCCACGGCAGGCTGGAGTTGCTGATGGGAGGAGAGGACTCCATGGCAGGTGAGAAAATACCACCCAGGACCTGACTGAGACCCCATCCGGCATCAGTCCACGTGAACCCAGTGTCTGCAGGGAAATTTTACAGTCAAAACCTGTGCAGTCTGCTATGAACCAAGGAATAAGGAGGCTGCTGGAAAAGCCATCATTTTGCTGGGCTATTGATGTTGGTGAGAGTTGATCACAGTTTGAAAGGTGCAGAAGGCCATGCCTGGCAAAGAGACAGATGGGAGACCTCTCTGGTTGGGGCGAGAATGCTGTGTGGGATGGCTCAGGGGTGGAGGTAGCGAGCCTGTGCTTGAGCGGGGCCAACCGAGAGTCAAATCCCGGGCTGCCGCGTGTCGAGTGCGGTGGCCATGGGTCCATCCATGACTTCTCTGAGTCCCTAGTCCCCTACCCGTAAAAACGGAAGCAATAACACAGACTTCTTAGGTTGTTTTTTTGAGACCTGAGATAGACCACATGTGTAAGGCATTCAGCACAGTGCTTGACTTGTGTAGGGCTCCCAAAGCTGAGCTATAATTGGGTAATTGCTGATGGTGCTCAGATTCCAAGGTGAAAGGAGAAGAGACACAGGGATGCTGAGGGGGAGTTGAGGAGAGGTTGCTGCACAGTCCAAGAGGACCATAAACAACATCACAGAGGAGGCACATGAGGGCTGCCTCACACTCAGCAGAAAGGCCAGAGTGAGGGCGTGCAGCTGGCTCGCAGAGGTGGGCTTTCAAATCCCAGAGGAATGGGCTGACTGCACTGCCCAGGCTGTGGTTGCTCCACACTGAGGACTTGGGATACCCACCTGCCTCAGCTTCTTGGATGATCTCCAGAATGCCAGGCAGCCAGACGTGAGGTCATGCATTTACTGTAGGGAGCTGTGCAGCTGGGTGAGGGGAGGGGGCTACCAGGCAGAGGCTCTGCCTGCCTCAAAGTGCTCCAGAGGGGCTGGGTGGGCCCCAAAGTGTTCAGAGGGACTTGATCAGAGGCCCTCAAGCAAAGCATGCCTTAGGTGTAGGGTCAGGGGAAAGGGCCCAGCCTCTCTGCCCTCCCATCTCCAGCCCTGCTTCCATCTCATGGGCCTGGGCCACGTGGCCCTTCTAAATGAAGCTCCTGAGCTAGGTGGATGTTGGTGCAGACACAACCGACCGGTCTGCCATGCATGTGTGAGAACACAGGCTGCTCCAGCGGCCTTGCAGACACCCACCCAGCACCTCAGGCAATGGAAACCCCCCAGGAAATGGCCTTGTGTGGGAAGGAGGGCACGCCCCCAACCCTGGACACAACCTCCAGGGTTGAGAGGAGAGGCGGGACCAGGGAAAGGCTGCCCCAGCAGATTAGGCTTTGAGACAAGGTAAATGAAGTCAGGGTCACAGAAGGGCTTCTCACCCAACCCTCTCACTTCACAAGTGGGGAAACCGGCCCAGAGAGGGCAAGTAAACAAACAGCGTAAGGAGTTTGTGGTTGTGGAAGGTTGTGAAATGGCCCCTCAAAAGATATTCCCATTCTAATACCTGGAACTTGTCAGTGTTACCTTACATGAGGGGAAAACAGGAGTTTTTGGCAATGTGAGCAGATGAAGAATCTTGTGATGGGAAGATTATCCTGCGGTATCTAGGTGGGCTGTAAATACAGTCACATGCATCGTTATAATCAGACGACAAAGAGAGATCTGAAAACACACAGAGGAGGCCCCAGTGTGGAGACCAGTAGAGGGAGGCTTGAGAACACGGGCCTTGAACATCGGAGTTGGTGTGGCCATAGCCACCGGACCCTGGAAGAGGCGCGTAACAGATTCTCCCCGCCAGCCCCTGAGTGAGTGCAGCTCTGCCAACTCTTGATGTTGGCCCAGGGAAACTGTTTTCAGACTTCTGGCCCCCACAACTGCGAGAGAATAAATTACGTTGTTTTAAGCTACTAAGGTTTTAGTAATTTATTACGGCAGCCACAGGAAACTAATACAGTGTTTTCCCTGGGCCCGGCCCGGCCTTGGAACTGTGTCGTCCTATCGGTACCCTGGACCCATAAGAGGGAGGGATGGCAGGGGCAGAGAAGGCAGGGACTCCATTTTCCATCACAAGCTGTCTCCACCAGCCTCGCTGAGGGATGGTGATGGAGATGTACCATGTC</dnaseq>| | sequence = <dnaseq>CAGATGCTTTGCAGGACAACAGAAGTGGGATCATGGGGACCTCTCTGTGGGTTCACCCGGTCCTGTTGTGCTTGACCCCGGCCCTGAGTCAGTCACCACTCCCCATGGCCTTCATGCCTTACCTGGACAGTGAGAGGATCAGATGAGCGAAGAGGTTCCACAGTCTGAGTGCTCGGGAGAATGACCTGGGAGTCTTTTAAAAATTCAGTTTCCTTGGCTTCTTATCCTGAAAATTCAGTCAGTAGACAAGGAGCACAACCCAGGAATCTGTATTTGTCACAATCAGCTGTAGTGATTTTGATGAGCCCAAGTATTCTCTAGGGTCCTACCAGCCTGGCACTCGGGCACCCTCTTGCTCCATGGGTGAAAGCTCGAGAGATAATAGAGAGATAATAGGCTGGAACAGAATTTCAGTGGAAGGGTGGGGAGGGAGGCAGAGCTTCTCAGGCACAGGGATGTGCAGCTGGGAGAGGTGCAATGACCGAACCTTTTTTACCTATTCTCTGAGTCCTTGTTGGTTTTTATTGCTAACGTCATATGAGATTGTTACATTGTCTTGGCTGTGCCTGTGTGTCACATATTATGCTTTCTCACCTAACCCCAGTAAAATCCCACCTTCATTGATCAAAACAGGTTGTTATCATATGGACGCTCAAAATATTTTTATGCACCTTCTCAGTCTGCAGAGAATTCCACTGCAAACAGCTTATAAGGTCCATGTGTTTGGCTGTAGGTTCTTCCTCAAACTGGCTGCTTCGTAGACAAGCAGGTGCCTCGGGGACTGTGTCTTCACATAAGTCATGGTCTGTTTTCCATGGGGAGGCTGCAAGAGCTAGGGGGACAGAGGTGACAATGCAGAAGATGGAACAAAGTAACAGCACAATGGGAGCATGCAGAGGCCCGGGGATAGGTCTGGGTGTTAGGAGGACAACCTGGCCCCACTGGCACTCTGAAGGACTGCGTTCCCCATTGCATGAGGGAAGAAACTGAGGGTGGAGAGGCTCCAGGACAGAGCAGGATGGTGCTGGTGTTGAACTCTGAGACGACGTGACTACAATGCCTGTGCCCTTTGCTGGGAGGCTAATCAGAATCCAGGAACGAGAGGCTGGGCAGAAACCAGGCCAGGGTGCATCCCCCACGGCAGGCTGGAGTTGCTGATGGGAGGAGAGGACTCCATGGCAGGTGAGAAAATACCACCCAGGACCTGACTGAGACCCCATCCGGCATCAGTCCACGTGAACCCAGTGTCTGCAGGGAAATTTTACAGTCAAAACCTGTGCAGTCTGCTATGAACCAAGGAATAAGGAGGCTGCTGGAAAAGCCATCATTTTGCTGGGCTATTGATGTTGGTGAGAGTTGATCACAGTTTGAAAGGTGCAGAAGGCCATGCCTGGCAAAGAGACAGATGGGAGACCTCTCTGGTTGGGGCGAGAATGCTGTGTGGGATGGCTCAGGGGTGGAGGTAGCGAGCCTGTGCTTGAGCGGGGCCAACCGAGAGTCAAATCCCGGGCTGCCGCGTGTCGAGTGCGGTGGCCATGGGTCCATCCATGACTTCTCTGAGTCCCTAGTCCCCTACCCGTAAAAACGGAAGCAATAACACAGACTTCTTAGGTTGTTTTTTTGAGACCTGAGATAGACCACATGTGTAAGGCATTCAGCACAGTGCTTGACTTGTGTAGGGCTCCCAAAGCTGAGCTATAATTGGGTAATTGCTGATGGTGCTCAGATTCCAAGGTGAAAGGAGAAGAGACACAGGGATGCTGAGGGGGAGTTGAGGAGAGGTTGCTGCACAGTCCAAGAGGACCATAAACAACATCACAGAGGAGGCACATGAGGGCTGCCTCACACTCAGCAGAAAGGCCAGAGTGAGGGCGTGCAGCTGGCTCGCAGAGGTGGGCTTTCAAATCCCAGAGGAATGGGCTGACTGCACTGCCCAGGCTGTGGTTGCTCCACACTGAGGACTTGGGATACCCACCTGCCTCAGCTTCTTGGATGATCTCCAGAATGCCAGGCAGCCAGACGTGAGGTCATGCATTTACTGTAGGGAGCTGTGCAGCTGGGTGAGGGGAGGGGGCTACCAGGCAGAGGCTCTGCCTGCCTCAAAGTGCTCCAGAGGGGCTGGGTGGGCCCCAAAGTGTTCAGAGGGACTTGATCAGAGGCCCTCAAGCAAAGCATGCCTTAGGTGTAGGGTCAGGGGAAAGGGCCCAGCCTCTCTGCCCTCCCATCTCCAGCCCTGCTTCCATCTCATGGGCCTGGGCCACGTGGCCCTTCTAAATGAAGCTCCTGAGCTAGGTGGATGTTGGTGCAGACACAACCGACCGGTCTGCCATGCATGTGTGAGAACACAGGCTGCTCCAGCGGCCTTGCAGACACCCACCCAGCACCTCAGGCAATGGAAACCCCCCAGGAAATGGCCTTGTGTGGGAAGGAGGGCACGCCCCCAACCCTGGACACAACCTCCAGGGTTGAGAGGAGAGGCGGGACCAGGGAAAGGCTGCCCCAGCAGATTAGGCTTTGAGACAAGGTAAATGAAGTCAGGGTCACAGAAGGGCTTCTCACCCAACCCTCTCACTTCACAAGTGGGGAAACCGGCCCAGAGAGGGCAAGTAAACAAACAGCGTAAGGAGTTTGTGGTTGTGGAAGGTTGTGAAATGGCCCCTCAAAAGATATTCCCATTCTAATACCTGGAACTTGTCAGTGTTACCTTACATGAGGGGAAAACAGGAGTTTTTGGCAATGTGAGCAGATGAAGAATCTTGTGATGGGAAGATTATCCTGCGGTATCTAGGTGGGCTGTAAATACAGTCACATGCATCGTTATAATCAGACGACAAAGAGAGATCTGAAAACACACAGAGGAGGCCCCAGTGTGGAGACCAGTAGAGGGAGGCTTGAGAACACGGGCCTTGAACATCGGAGTTGGTGTGGCCATAGCCACCGGACCCTGGAAGAGGCGCGTAACAGATTCTCCCCGCCAGCCCCTGAGTGAGTGCAGCTCTGCCAACTCTTGATGTTGGCCCAGGGAAACTGTTTTCAGACTTCTGGCCCCCACAACTGCGAGAGAATAAATTACGTTGTTTTAAGCTACTAAGGTTTTAGTAATTTATTACGGCAGCCACAGGAAACTAATACAGTGTTTTCCCTGGGCCCGGCCCGGCCTTGGAACTGTGTCGTCCTATCGGTACCCTGGACCCATAAGAGGGAGGGATGGCAGGGGCAGAGAAGGCAGGGACTCCATTTTCCATCACAAGCTGTCTCCACCAGCCTCGCTGAGGGATGGTGATGGAGATGTACCATGTC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:lnc-KCNA5-3]][[Category:NONHSAG010268]][[Category:Transcripts]] |
Latest revision as of 04:31, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
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Expression
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Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-KCNA5-3:3 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT026011 |
| Classification |
intergenic |
| Length |
3300 nt |
| Genomic location |
chr12+:5629291..5633132 |
| Exon number |
3 |
| Exons |
5629291..5630235,5630561..5630797,5631015..5633132 |
| Genome context |
|
| Sequence |
000001 CAGATGCTTT GCAGGACAAC AGAAGTGGGA TCATGGGGAC CTCTCTGTGG GTTCACCCGG TCCTGTTGTG CTTGACCCCG 000080 000081 GCCCTGAGTC AGTCACCACT CCCCATGGCC TTCATGCCTT ACCTGGACAG TGAGAGGATC AGATGAGCGA AGAGGTTCCA 000160 000161 CAGTCTGAGT GCTCGGGAGA ATGACCTGGG AGTCTTTTAA AAATTCAGTT TCCTTGGCTT CTTATCCTGA AAATTCAGTC 000240 000241 AGTAGACAAG GAGCACAACC CAGGAATCTG TATTTGTCAC AATCAGCTGT AGTGATTTTG ATGAGCCCAA GTATTCTCTA 000320 000321 GGGTCCTACC AGCCTGGCAC TCGGGCACCC TCTTGCTCCA TGGGTGAAAG CTCGAGAGAT AATAGAGAGA TAATAGGCTG 000400 000401 GAACAGAATT TCAGTGGAAG GGTGGGGAGG GAGGCAGAGC TTCTCAGGCA CAGGGATGTG CAGCTGGGAG AGGTGCAATG 000480 000481 ACCGAACCTT TTTTACCTAT TCTCTGAGTC CTTGTTGGTT TTTATTGCTA ACGTCATATG AGATTGTTAC ATTGTCTTGG 000560 000561 CTGTGCCTGT GTGTCACATA TTATGCTTTC TCACCTAACC CCAGTAAAAT CCCACCTTCA TTGATCAAAA CAGGTTGTTA 000640 000641 TCATATGGAC GCTCAAAATA TTTTTATGCA CCTTCTCAGT CTGCAGAGAA TTCCACTGCA AACAGCTTAT AAGGTCCATG 000720 000721 TGTTTGGCTG TAGGTTCTTC CTCAAACTGG CTGCTTCGTA GACAAGCAGG TGCCTCGGGG ACTGTGTCTT CACATAAGTC 000800 000801 ATGGTCTGTT TTCCATGGGG AGGCTGCAAG AGCTAGGGGG ACAGAGGTGA CAATGCAGAA GATGGAACAA AGTAACAGCA 000880 000881 CAATGGGAGC ATGCAGAGGC CCGGGGATAG GTCTGGGTGT TAGGAGGACA ACCTGGCCCC ACTGGCACTC TGAAGGACTG 000960 000961 CGTTCCCCAT TGCATGAGGG AAGAAACTGA GGGTGGAGAG GCTCCAGGAC AGAGCAGGAT GGTGCTGGTG TTGAACTCTG 001040 001041 AGACGACGTG ACTACAATGC CTGTGCCCTT TGCTGGGAGG CTAATCAGAA TCCAGGAACG AGAGGCTGGG CAGAAACCAG 001120 001121 GCCAGGGTGC ATCCCCCACG GCAGGCTGGA GTTGCTGATG GGAGGAGAGG ACTCCATGGC AGGTGAGAAA ATACCACCCA 001200 001201 GGACCTGACT GAGACCCCAT CCGGCATCAG TCCACGTGAA CCCAGTGTCT GCAGGGAAAT TTTACAGTCA AAACCTGTGC 001280 001281 AGTCTGCTAT GAACCAAGGA ATAAGGAGGC TGCTGGAAAA GCCATCATTT TGCTGGGCTA TTGATGTTGG TGAGAGTTGA 001360 001361 TCACAGTTTG AAAGGTGCAG AAGGCCATGC CTGGCAAAGA GACAGATGGG AGACCTCTCT GGTTGGGGCG AGAATGCTGT 001440 001441 GTGGGATGGC TCAGGGGTGG AGGTAGCGAG CCTGTGCTTG AGCGGGGCCA ACCGAGAGTC AAATCCCGGG CTGCCGCGTG 001520 001521 TCGAGTGCGG TGGCCATGGG TCCATCCATG ACTTCTCTGA GTCCCTAGTC CCCTACCCGT AAAAACGGAA GCAATAACAC 001600 001601 AGACTTCTTA GGTTGTTTTT TTGAGACCTG AGATAGACCA CATGTGTAAG GCATTCAGCA CAGTGCTTGA CTTGTGTAGG 001680 001681 GCTCCCAAAG CTGAGCTATA ATTGGGTAAT TGCTGATGGT GCTCAGATTC CAAGGTGAAA GGAGAAGAGA CACAGGGATG 001760 001761 CTGAGGGGGA GTTGAGGAGA GGTTGCTGCA CAGTCCAAGA GGACCATAAA CAACATCACA GAGGAGGCAC ATGAGGGCTG 001840 001841 CCTCACACTC AGCAGAAAGG CCAGAGTGAG GGCGTGCAGC TGGCTCGCAG AGGTGGGCTT TCAAATCCCA GAGGAATGGG 001920 001921 CTGACTGCAC TGCCC |