Difference between revisions of "Lnc-SPRYD7-1:5"

Latest revision as of 05:23, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-SPRYD7-1:5
Source	LNCipedia2.1
Same with	NONHSAT033791
Classification	intergenic
Length	2090 nt
Genomic location	chr13-:50617572..50656114
Exon number	7
Exons	50617572..50618904,50619254..50619368,50623720..50623798,50642233..50642299,50649695..50649789,50655304..50655548,50655959..50656114
Genome context
Sequence	000001 GATGCCTGAT CTCATCAATC TAGCGGGAGA GACAGGATAA CCTGTCCGAG AGTATAGCGC CACTATGACT CCGCCGGAAA 000080 000081 AATTACTTTA AAAATCGCCA AAAATTACTT GGAGCAAAGG GCAGTCGGCG GAGCTTCGCC AAGGCTGGCG CAGTCGCCGT 000160 000161 TTTCTCGACC CGGTGATGGC CGTCATCTCG TGACAAGAAA CTTAAGGTCG ACAGAAAATT CAGGACCCGG AGTCATGGGT 000240 000241 CCCTCCGGTG GGTCGTGGCA ACAGTCCCCC CCGCCACCGC CCGGCACCCA TCTATCTATA TTGTCTTTTG ACGCTGAAGC 000320 000321 GTGAGGTGCC CCAGGAAAGA GTTTCCCAAG CCCTGGCTGC CCTCCCCCGG CGCGCTGGGT CCCGGTGAGG TCTCTAGGTA 000400 000401 GGTTTTGACC TGTAGCAGAG AACCAATTCT GGAGAACAGC CTCACTTCTT TGATTGAATA CTTACATAAT GCATTGGAAC 000480 000481 ATGACATGAG ATTAAGGTTT AATAATGATA GAATGAAGAC CACAATAAAA GAGACCTCTA CTTAGCTCAG CAATTCTTAC 000560 000561 CTTTCTTACC TATTTGATGA AGATGTCTTT TGAAAGGTGT ACTGCAAGGA ACAAAATGTT TGTAAATTCT CCTTTTACCA 000640 000641 AGGTTTCTTT TTTAATTGAT GCCAAAGAGT TCCAATATTG AACATCTTAA GTCTGTTACT TGGATTACGG ATTGAGTTTG 000720 000721 GAGCTTACTC AGAGGACTAC AGGAGAGTAT CCAGGAAGTG GATAATTACT GTACCTTCCT CATGGAAAAA GTTTTATTTA 000800 000801 AAGTGTTATT TCTCATTGAA TACTATCAAA AAGGAAAAAA AAATGACCTA AACTTTTGAG ATAGATTTGG CTCTAGTAAG 000880 000881 TATTTAGTTA TATCACTTGC ATATCTGGGA GAAGAAATAA GAGACTATCA TCAGTACATT CCCATCTACT AAAAAAATTT 000960 000961 ATTTTACACA TGTCAAGGGA TTACTTATAA CTTCCATTTT ATTACTAATA GCTTGAACCC TTTTAATGAA GACCTAACTC 001040 001041 CTCCACCAGA AATTTAAGTT TATGTTCTTA CTTTGTTTAC TTATAAAATA CATCTCAGGT ATTTCGGATG TCTTTTTTTT 001120 001121 TTCTAAGCCT ATATGAAATG AAAAATATAT TGGCAAAATA AATGTTTAAA CCTTTTACGT TAAAATTACT TTGAAAGATG 001200 001201 AAAAGTTAGT GCTGTTTTTG TCTACGTTAT ACTGAAATTA AATGTTTATA ATTTATATTT TGGGTTTATG TATAAATCAT 001280 001281 GGAATTTATG CAAAAATATG AGTAGTACAG ATTCTCCTCT AATTCTGTAG GACTTTGAAT AATGTGATAT TTTTCTTATA 001360 001361 ATTGGACCCT TGTGTTTTGA AGAAATGCCA ACTGCTTGAA GAATCTCCTT GTTATTTGTA TTATTTGCTA TAGGGTTAGA 001440 001441 TGTTGAGAAA TTCTGCTGAC AAAAAATTTT AAGCCAGTTT TACACTAAAT GTTCCTCAGT CTGATTAATT TGTTATTGGA 001520 001521 TGTATTCTGT ATCTTTCTTT TGTAATTTGT AACTTTTATC CACTTAGCAC GAATGATTCT ATTAAAGAAA ATCATTAGGA 001600 001601 AGTGGTAGAA ACTTTAAATC GCCCCAGAGT TTGCCTGTTT CCATATTTTA TTATCTTATA ATCTTCGGGA GTGCTTACAC 001680 001681 TTATGGAGCT AACATTTTCA GAGATACAGC TTCTTATAGT AACACTAAAA CTTTCTTCCT CTTTGGACTG AATACCTATA 001760 001761 ATTATAACTA TATGGTAGTT TAAGTTTCCT TGTGATTAGT CAAAAATACC ATTTTAGTAT GAAGCAATGA AGTCTATTAT 001840 001841 TTGTTGTCCC ATAATTGAGA AAGCTTAAAT ACACCTTTTA TTAAGAGTTT GTAAATTCTA GCTTAGTCTA CACAGATTTT 001920 001921 TATATCAATT TGTTTATATT TTTATTAATG TCATTTCTGG AAGTGTGAAA ATGTTAATGT TCAACAAGCA ACATTAAAAA

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 sequence = <dnaseq>GATGCCTGATCTCATCAATCTAGCGGGAGAGACAGGATAACCTGTCCGAGAGTATAGCGCCACTATGACTCCGCCGGAAAAATTACTTTAAAAATCGCCAAAAATTACTTGGAGCAAAGGGCAGTCGGCGGAGCTTCGCCAAGGCTGGCGCAGTCGCCGTTTTCTCGACCCGGTGATGGCCGTCATCTCGTGACAAGAAACTTAAGGTCGACAGAAAATTCAGGACCCGGAGTCATGGGTCCCTCCGGTGGGTCGTGGCAACAGTCCCCCCCGCCACCGCCCGGCACCCATCTATCTATATTGTCTTTTGACGCTGAAGCGTGAGGTGCCCCAGGAAAGAGTTTCCCAAGCCCTGGCTGCCCTCCCCCGGCGCGCTGGGTCCCGGTGAGGTCTCTAGGTAGGTTTTGACCTGTAGCAGAGAACCAATTCTGGAGAACAGCCTCACTTCTTTGATTGAATACTTACATAATGCATTGGAACATGACATGAGATTAAGGTTTAATAATGATAGAATGAAGACCACAATAAAAGAGACCTCTACTTAGCTCAGCAATTCTTACCTTTCTTACCTATTTGATGAAGATGTCTTTTGAAAGGTGTACTGCAAGGAACAAAATGTTTGTAAATTCTCCTTTTACCAAGGTTTCTTTTTTAATTGATGCCAAAGAGTTCCAATATTGAACATCTTAAGTCTGTTACTTGGATTACGGATTGAGTTTGGAGCTTACTCAGAGGACTACAGGAGAGTATCCAGGAAGTGGATAATTACTGTACCTTCCTCATGGAAAAAGTTTTATTTAAAGTGTTATTTCTCATTGAATACTATCAAAAAGGAAAAAAAAATGACCTAAACTTTTGAGATAGATTTGGCTCTAGTAAGTATTTAGTTATATCACTTGCATATCTGGGAGAAGAAATAAGAGACTATCATCAGTACATTCCCATCTACTAAAAAAATTTATTTTACACATGTCAAGGGATTACTTATAACTTCCATTTTATTACTAATAGCTTGAACCCTTTTAATGAAGACCTAACTCCTCCACCAGAAATTTAAGTTTATGTTCTTACTTTGTTTACTTATAAAATACATCTCAGGTATTTCGGATGTCTTTTTTTTTTCTAAGCCTATATGAAATGAAAAATATATTGGCAAAATAAATGTTTAAACCTTTTACGTTAAAATTACTTTGAAAGATGAAAAGTTAGTGCTGTTTTTGTCTACGTTATACTGAAATTAAATGTTTATAATTTATATTTTGGGTTTATGTATAAATCATGGAATTTATGCAAAAATATGAGTAGTACAGATTCTCCTCTAATTCTGTAGGACTTTGAATAATGTGATATTTTTCTTATAATTGGACCCTTGTGTTTTGAAGAAATGCCAACTGCTTGAAGAATCTCCTTGTTATTTGTATTATTTGCTATAGGGTTAGATGTTGAGAAATTCTGCTGACAAAAAATTTTAAGCCAGTTTTACACTAAATGTTCCTCAGTCTGATTAATTTGTTATTGGATGTATTCTGTATCTTTCTTTTGTAATTTGTAACTTTTATCCACTTAGCACGAATGATTCTATTAAAGAAAATCATTAGGAAGTGGTAGAAACTTTAAATCGCCCCAGAGTTTGCCTGTTTCCATATTTTATTATCTTATAATCTTCGGGAGTGCTTACACTTATGGAGCTAACATTTTCAGAGATACAGCTTCTTATAGTAACACTAAAACTTTCTTCCTCTTTGGACTGAATACCTATAATTATAACTATATGGTAGTTTAAGTTTCCTTGTGATTAGTCAAAAATACCATTTTAGTATGAAGCAATGAAGTCTATTATTTGTTGTCCCATAATTGAGAAAGCTTAAATACACCTTTTATTAAGAGTTTGTAAATTCTAGCTTAGTCTACACAGATTTTTATATCAATTTGTTTATATTTTTATTAATGTCATTTCTGGAAGTGTGAAAATGTTAATGTTCAACAAGCAACATTAAAAATAGATTTGAAACATTTATATATAGAGAGGTACACATTTATTTACTGTTTAGGTACTGAAGATTATCACTTAATAAAAAATATATATCCCA</dnaseq>|
 }}
-[[Category:Intergenic]]
+[[Category:Intergenic]][[Category:lnc-SPRYD7-1]][[Category:NONHSAG013515]][[Category:Transcripts]]