Difference between revisions of "NONHSAT005862"
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==Annotated Information==
===Transcriptomic Nomeclature===
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sequence = <dnaseq>ctgggtcagCTTTACCCCTCAAACATGGGAGAAAAAGTTTCAGCATTTTAATTCAAATTGGTAAAAGGCTGAGCAACCCTTAAAGCTGCCATAATGGAAGAAGACTGTGAGCTAGCTTAAAAAAGAGAGAATGAAGGGGAAGAAACAAAACCCCTGTGTGGCAGAGTGTCGAGATGAGATGAGCATTTATTTGTCTCCGTCGAATTCCTTACGGAGATAAGGTGCAGCTGCAGGGGATGACACCGAAGATACAAGCACTGAGTTCACTGACAGTATTGAGGAGGAGGCTGCACACCATAGTCACCAGCAAGTAAGTCAGTGTCAGGGTCTGGGACTTCCAGGGTGGACAGCACACAGCCCTTCTGAGGTCTGATAGTCTCCTGCAGCCCTTGCGGACTTAGTGAGAAGATATCTTTTTACATAAACTACTTCTCAGTCATCTTCCTGTTCTCCTTGAACTTCCCAGCTGCCTTTCCAACCCATATCTTCACTCCATTTTTCTCTCCAATCCACCCTTTGGTTTGTATTGTATCTCTTTCTTCTGCTTCCTTCCCCCTCCTACCCACCTTTG</dnaseq>| | sequence = <dnaseq>ctgggtcagCTTTACCCCTCAAACATGGGAGAAAAAGTTTCAGCATTTTAATTCAAATTGGTAAAAGGCTGAGCAACCCTTAAAGCTGCCATAATGGAAGAAGACTGTGAGCTAGCTTAAAAAAGAGAGAATGAAGGGGAAGAAACAAAACCCCTGTGTGGCAGAGTGTCGAGATGAGATGAGCATTTATTTGTCTCCGTCGAATTCCTTACGGAGATAAGGTGCAGCTGCAGGGGATGACACCGAAGATACAAGCACTGAGTTCACTGACAGTATTGAGGAGGAGGCTGCACACCATAGTCACCAGCAAGTAAGTCAGTGTCAGGGTCTGGGACTTCCAGGGTGGACAGCACACAGCCCTTCTGAGGTCTGATAGTCTCCTGCAGCCCTTGCGGACTTAGTGAGAAGATATCTTTTTACATAAACTACTTCTCAGTCATCTTCCTGTTCTCCTTGAACTTCCCAGCTGCCTTTCCAACCCATATCTTCACTCCATTTTTCTCTCCAATCCACCCTTTGGTTTGTATTGTATCTCTTTCTTCTGCTTCCTTCCCCCTCCTACCCACCTTTG</dnaseq>| | ||
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− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG002686]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 19:38, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005862 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
571 nt |
Genomic location |
chr1-:144892240..144916293 |
Exon number |
4 |
Exons |
144892240..144892589,144894083..144894092,144895089..144895290,144916285..144916293 |
Genome context |
|
Sequence |
000001 ctgggtcagC TTTACCCCTC AAACATGGGA GAAAAAGTTT CAGCATTTTA ATTCAAATTG GTAAAAGGCT GAGCAACCCT 000080
000081 TAAAGCTGCC ATAATGGAAG AAGACTGTGA GCTAGCTTAA AAAAGAGAGA ATGAAGGGGA AGAAACAAAA CCCCTGTGTG 000160 000161 GCAGAGTGTC GAGATGAGAT GAGCATTTAT TTGTCTCCGT CGAATTCCTT ACGGAGATAA GGTGCAGCTG CAGGGGATGA 000240 000241 CACCGAAGAT ACAAGCACTG AGTTCACTGA CAGTATTGAG GAGGAGGCTG CACACCATAG TCACCAGCAA GTAAGTCAGT 000320 000321 GTCAGGGTCT GGGACTTCCA GGGTGGACAG CACACAGCCC TTCTGAGGTC TGATAGTCTC CTGCAGCCCT TGCGGACTTA 000400 000401 GTGAGAAGAT ATCTTTTTAC ATAAACTACT TCTCAGTCAT CTTCCTGTTC TCCTTGAACT TCCCAGCTGC CTTTCCAACC 000480 000481 CATATCTTCA CTCCATTTTT CTCTCCAATC CACCCTTTGG TTTGTATTGT ATCTCTTTCT TCTGCTTCCT TCCCCCTCCT 000560 000561 ACCCACCTTT G |
Predicted Small Protein
Name | NONHSAT005862_smProtein_236:313 |
Length | 26 |
Molecular weight | 2850.4297 |
Aromaticity | 0.0 |
Instability index | 56.476 |
Isoelectric point | 12.307434082 |
Runs | 4 |
Runs residual | 0.0483018867925 |
Runs probability | 0.00728669846315 |
Amino acid sequence | MTPKIQALSSLTVLRRRLHTIVTSK |
Secondary structure | LLHHHHHHHHHHHHHHHHHEELLLL |
PRMN | - |
PiMo | - |