Difference between revisions of "NONHSAT006365"

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sequence = <dnaseq>AGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACAACTATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTGTGCCGCAGCTATGGGAGGGCAGCCTGTACTCAGCCACAGCTGCGGATTTCCAGGCCAGTGATGCTGTAGTTTACAGAAGCCTTGGGCCCCAGCCCCCACTCCGCTCCGCCAAAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGAGGATGCTCGGCTGGGGAG</dnaseq>|
 
sequence = <dnaseq>AGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACAACTATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTGTGCCGCAGCTATGGGAGGGCAGCCTGTACTCAGCCACAGCTGCGGATTTCCAGGCCAGTGATGCTGTAGTTTACAGAAGCCTTGGGCCCCAGCCCCCACTCCGCTCCGCCAAAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGAGGATGCTCGGCTGGGGAG</dnaseq>|
 
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[[Category:Sense]]
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[[Category:Sense]][[Category:NONHSAG002895]][[Category:Transcripts]]

Latest revision as of 19:40, 16 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT006365

Source

NONCODE4.0

Same with

,

Classification

sense

Length

324 nt

Genomic location

chr1-:151110188..151111937

Exon number

4

Exons

151110188..151110275,151110485..151110581,151111106..151111207,151111901..151111937

Genome context

Sequence
000001 AGATGTGGAG AACTGTGCTG TACGGGGAAA GCTGACGGAT GAGTGCTACA ACTATATTCG TGTTCTTGTT CCCTGGGACT 000080
000081 CCCAGACGCT CCTTGCCTGT GGAACGAACT CATTCAGCCC TGTGTGCCGC AGCTATGGGA GGGCAGCCTG TACTCAGCCA 000160
000161 CAGCTGCGGA TTTCCAGGCC AGTGATGCTG TAGTTTACAG AAGCCTTGGG CCCCAGCCCC CACTCCGCTC CGCCAAAGCC 000240
000241 ACACTTTGTC CAGGCCTTGG AGCATGGAGA CCATGTCTAC TTCTTCTTCC GCGAGGTCTC TGTGGAGGAT GCTCGGCTGG 000320
000321 GGAG
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Predicted Small Protein

Name NONHSAT006365_smProtein_38:184
Length 49
Molecular weight 5032.8015
Aromaticity 0.0833333333333
Instability index 70.13125
Isoelectric point 9.00750732422
Runs 7
Runs residual 0.0197368421053
Runs probability 0.0481111363465
Amino acid sequence MSATTIFVFLFPGTPRRSLPVERTHSALCAAAMGGQPVLSHSCGFPGQ
Secondary structure LLEEEEEEEELLLLLLLLLLLLLLHHHHHHHHLLLLLEEELLLLLLLL
PRMN -
PiMo -