Difference between revisions of "NONHSAT006489"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
|||
| (One intermediate revision by one other user not shown) | |||
| Line 42: | Line 42: | ||
sequence = <dnaseq>CTCAGGAACAGCCTTCTCCTGCCTCCTCTGCACCTGGACAACTCAACTCCTGCCAAGATGTCCTGCCAGCAGAACCAGCAGCAGTGCCAACCCCCACCCAAGTGTCCCTCACCCAAGTGTCCCCCAAAGAGCCCAGTACAGTGTCTGCCTCCAGCTTCCTCTGGCTGTGCCCCAAGCTCTGGGGGCTGTGGCCCTAGCTCCGAGGGCGGCTGCTTCCTGAACCACCACAGGCGCCACCACCGATGCCGGCGCCAGAGGCCCAACTCCTGTGACAGGGGCAGTGGTCAGCAAGGCGGGGGCTCTGGCTGCGGCCATGGCTCTGGAGGCTGCTGCTGACCTGGATCCTGATGCTGAGACAAGCGATTTTGGAGGAAACAAGAATCCCAAGGGCCCAGGAAAACCCCATCTTGATGCATGAGTTCCCAGATACCCTCTTCTGGCTTTCACAGGCTGAGCTAGGGGTTTTCCTGTGGAAGGTCTGAGCTCTCCCCAGAAGGCACTTCCTGTCTGATGTCCAGGATGTCACATGTTCCCTTACCCCTGTACCTGTGAAGGATTGGCAGTGCTTGTGCCTGACCTCATCAAAAAATAAAGCTCCTTGTCCTCATTAAAAAAAA</dnaseq>| | sequence = <dnaseq>CTCAGGAACAGCCTTCTCCTGCCTCCTCTGCACCTGGACAACTCAACTCCTGCCAAGATGTCCTGCCAGCAGAACCAGCAGCAGTGCCAACCCCCACCCAAGTGTCCCTCACCCAAGTGTCCCCCAAAGAGCCCAGTACAGTGTCTGCCTCCAGCTTCCTCTGGCTGTGCCCCAAGCTCTGGGGGCTGTGGCCCTAGCTCCGAGGGCGGCTGCTTCCTGAACCACCACAGGCGCCACCACCGATGCCGGCGCCAGAGGCCCAACTCCTGTGACAGGGGCAGTGGTCAGCAAGGCGGGGGCTCTGGCTGCGGCCATGGCTCTGGAGGCTGCTGCTGACCTGGATCCTGATGCTGAGACAAGCGATTTTGGAGGAAACAAGAATCCCAAGGGCCCAGGAAAACCCCATCTTGATGCATGAGTTCCCAGATACCCTCTTCTGGCTTTCACAGGCTGAGCTAGGGGTTTTCCTGTGGAAGGTCTGAGCTCTCCCCAGAAGGCACTTCCTGTCTGATGTCCAGGATGTCACATGTTCCCTTACCCCTGTACCTGTGAAGGATTGGCAGTGCTTGTGCCTGACCTCATCAAAAAATAAAGCTCCTTGTCCTCATTAAAAAAAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG002954]][[Category:Transcripts]] |
Latest revision as of 19:41, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT006489 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
617 nt |
| Genomic location |
chr1-:152551505..152552980 |
| Exon number |
3 |
| Exons |
152551505..152551511,152551860..152552433,152552945..152552980 |
| Genome context |
|
| Sequence |
000001 CTCAGGAACA GCCTTCTCCT GCCTCCTCTG CACCTGGACA ACTCAACTCC TGCCAAGATG TCCTGCCAGC AGAACCAGCA 000080
000081 GCAGTGCCAA CCCCCACCCA AGTGTCCCTC ACCCAAGTGT CCCCCAAAGA GCCCAGTACA GTGTCTGCCT CCAGCTTCCT 000160 000161 CTGGCTGTGC CCCAAGCTCT GGGGGCTGTG GCCCTAGCTC CGAGGGCGGC TGCTTCCTGA ACCACCACAG GCGCCACCAC 000240 000241 CGATGCCGGC GCCAGAGGCC CAACTCCTGT GACAGGGGCA GTGGTCAGCA AGGCGGGGGC TCTGGCTGCG GCCATGGCTC 000320 000321 TGGAGGCTGC TGCTGACCTG GATCCTGATG CTGAGACAAG CGATTTTGGA GGAAACAAGA ATCCCAAGGG CCCAGGAAAA 000400 000401 CCCCATCTTG ATGCATGAGT TCCCAGATAC CCTCTTCTGG CTTTCACAGG CTGAGCTAGG GGTTTTCCTG TGGAAGGTCT 000480 000481 GAGCTCTCCC CAGAAGGCAC TTCCTGTCTG ATGTCCAGGA TGTCACATGT TCCCTTACCC CTGTACCTGT GAAGGATTGG 000560 000561 CAGTGCTTGT GCCTGACCTC ATCAAAAAAT AAAGCTCCTT GTCCTCATTA AAAAAAA |
Predicted Small Protein
| Name | NONHSAT006489_smProtein_347:481 |
| Length | 45 |
| Molecular weight | 5268.1185 |
| Aromaticity | 0.113636363636 |
| Instability index | 58.9454545455 |
| Isoelectric point | 5.05389404297 |
| Runs | 7 |
| Runs residual | 0.00401069518717 |
| Runs probability | 0.0368435662553 |
| Amino acid sequence | MLRQAILEETRIPRAQENPILMHEFPDTLFWLSQAELGVFLWKV |
| Secondary structure | LHHHHHHHHHLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLEEL |
| PRMN | - |
| PiMo | - |
