Difference between revisions of "NONHSAT012762"
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==Annotated Information==
===Transcriptomic Nomeclature===
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| + | ==Annotation== | ||
| + | ===Name=== | ||
| + | NONHSAT012762 | ||
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| + | ===Alias=== | ||
| + | NA | ||
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| + | ===Disease=== | ||
| + | Disease: triple-negative breast cancer [http://www.ncbi.nlm.nih.gov/pubmed/26078338 (PMID:26078338)] | ||
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| + | Dysfunction type: expression | ||
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| + | Description: LncRNAs NONHSAT125629 and ENST00000503938 were upregulated and that XRNA250621.1 and NONHSAT012762 were down-regulated in the tumor samples compared with NT samples. These qPCR results are consistent with the microarray data. | ||
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| + | ===Function=== | ||
| + | Function Mechanism: NA [http://www.ncbi.nlm.nih.gov/pubmed/26078338 (PMID:26078338)] | ||
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| + | Biological Process: pathogenic process | ||
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| + | Description: NA | ||
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sequence = <dnaseq>ATTTTCACCGCTATGCCTCCTTTCACTCTGGGAGTCTTCCAGAGGTCTTGCACTCGGGAGAGCATGCTCAGGTTTCCCCAGCTCTACAAAATCACCCAGAATGCCAAAGACTTCAACACAAGGATACTGTGTTGACCAGTGGTCATGCCACTGCCTGTTGATTTGTTGAAAATATTGTTTACACGTATGTTCTTGTTACTGATTGTCAGAAAGCTGGTTTTGAGACTGCAGCTTGGACTAAATTCAGTCATCTGGCTGTCTGGGGAAGCATGCTGACCAGTCTGGTGTTCTTTGGCATCTACTCAGCCATCTGGTCCACCATTCTCATTGCCCCAAATATGAGAGGACAGCAACTGTGATCCTGAGCTGTGCACACTTCTGGTTGGGATTATTTCTGGTTTCTACTTCCTGTTTGAAGATGTGGCATGGAGAGTGCCAAGCACATCTGCAAAAAAGACATTGCTGGAGGAGGTGCAAAGAGCTGGAAACCAAGTCTCCAGTCCTGGGAAAAGCAGTGGTATGGAAAAGCAATGGAAAGAG</dnaseq>| | sequence = <dnaseq>ATTTTCACCGCTATGCCTCCTTTCACTCTGGGAGTCTTCCAGAGGTCTTGCACTCGGGAGAGCATGCTCAGGTTTCCCCAGCTCTACAAAATCACCCAGAATGCCAAAGACTTCAACACAAGGATACTGTGTTGACCAGTGGTCATGCCACTGCCTGTTGATTTGTTGAAAATATTGTTTACACGTATGTTCTTGTTACTGATTGTCAGAAAGCTGGTTTTGAGACTGCAGCTTGGACTAAATTCAGTCATCTGGCTGTCTGGGGAAGCATGCTGACCAGTCTGGTGTTCTTTGGCATCTACTCAGCCATCTGGTCCACCATTCTCATTGCCCCAAATATGAGAGGACAGCAACTGTGATCCTGAGCTGTGCACACTTCTGGTTGGGATTATTTCTGGTTTCTACTTCCTGTTTGAAGATGTGGCATGGAGAGTGCCAAGCACATCTGCAAAAAAGACATTGCTGGAGGAGGTGCAAAGAGCTGGAAACCAAGTCTCCAGTCCTGGGAAAAGCAGTGGTATGGAAAAGCAATGGAAAGAG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG005629]][[Category:Transcripts]] |
Latest revision as of 03:25, 7 November 2018
Contents
Annotation
Name
NONHSAT012762
Alias
NA
Disease
Disease: triple-negative breast cancer (PMID:26078338)
Dysfunction type: expression
Description: LncRNAs NONHSAT125629 and ENST00000503938 were upregulated and that XRNA250621.1 and NONHSAT012762 were down-regulated in the tumor samples compared with NT samples. These qPCR results are consistent with the microarray data.
Function
Function Mechanism: NA (PMID:26078338)
Biological Process: pathogenic process
Description: NA
Please input one-sentence summary here.
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT012762 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
540 nt |
| Genomic location |
chr10+:37537046..37604729 |
| Exon number |
6 |
| Exons |
37537046..37537168,37550792..37550853,37551411..37551467,37553458..37553565,37598025..37598108,37604624..37604729 |
| Genome context |
|
| Sequence |
000001 ATTTTCACCG CTATGCCTCC TTTCACTCTG GGAGTCTTCC AGAGGTCTTG CACTCGGGAG AGCATGCTCA GGTTTCCCCA 000080
000081 GCTCTACAAA ATCACCCAGA ATGCCAAAGA CTTCAACACA AGGATACTGT GTTGACCAGT GGTCATGCCA CTGCCTGTTG 000160 000161 ATTTGTTGAA AATATTGTTT ACACGTATGT TCTTGTTACT GATTGTCAGA AAGCTGGTTT TGAGACTGCA GCTTGGACTA 000240 000241 AATTCAGTCA TCTGGCTGTC TGGGGAAGCA TGCTGACCAG TCTGGTGTTC TTTGGCATCT ACTCAGCCAT CTGGTCCACC 000320 000321 ATTCTCATTG CCCCAAATAT GAGAGGACAG CAACTGTGAT CCTGAGCTGT GCACACTTCT GGTTGGGATT ATTTCTGGTT 000400 000401 TCTACTTCCT GTTTGAAGAT GTGGCATGGA GAGTGCCAAG CACATCTGCA AAAAAGACAT TGCTGGAGGA GGTGCAAAGA 000480 000481 GCTGGAAACC AAGTCTCCAG TCCTGGGAAA AGCAGTGGTA TGGAAAAGCA ATGGAAAGAG |
