Difference between revisions of "NONHSAT015487"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GGCAAAGTGGGGCGGGCGCGGGACGCGTGCGGGATTGCGGCGGCAGCGGCGCACGCGGGCACCTGGGAGCGGCGGGCTGCTGCGGGAGGCGTTGGAGACTGGCTCCCGGGGGCTGTTAGGACCTTCCCTCAGGCCCGGGTGCTCAGAACGCTGGAGGACTTGCTTTTCTTGGGCCTTGATGCGAAGTGCTGACCCCGCTGGGCAGGCGGGGCAGCTCCGGCGCTCCTCGGAGACCACTGCGCTCCACGTTGAGGTGGGCGTGGGGTGCGGACAGGAATTGAAGCGGAAGTCTGGGAAGCTTTAGGGTCGCTGGAGGGGGACCCCGGTTGGAGAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTTCTTACGTCTGTTGCTAGATTATCGTCCAAAAGTGTTAATGCCCAAGTGACTGACATCAACTCCAAGGGATTGGAATTGAGGAAGACTGTTACTACAGTTGAGACTCAGAACTTGGAAGGCCTGCATCATGATGGCCAATTCTGCCATAAGCCCTGTCCTCCAGGTGAAAGGAAAGCTAGGGACTGCACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTCCAAATGCAGAAGATGTAGATTGTGTGATGAAGGACATGGCTTAGAAGTGGAAATAAACTGCACCCGGACCCAGAATACCAAGTGCAGATGTAAACCAAACTTTTTTTGTAACTCTACTGTATGTGAACACTGTGACCCTTGCACCAA</dnaseq>| | sequence = <dnaseq>GGCAAAGTGGGGCGGGCGCGGGACGCGTGCGGGATTGCGGCGGCAGCGGCGCACGCGGGCACCTGGGAGCGGCGGGCTGCTGCGGGAGGCGTTGGAGACTGGCTCCCGGGGGCTGTTAGGACCTTCCCTCAGGCCCGGGTGCTCAGAACGCTGGAGGACTTGCTTTTCTTGGGCCTTGATGCGAAGTGCTGACCCCGCTGGGCAGGCGGGGCAGCTCCGGCGCTCCTCGGAGACCACTGCGCTCCACGTTGAGGTGGGCGTGGGGTGCGGACAGGAATTGAAGCGGAAGTCTGGGAAGCTTTAGGGTCGCTGGAGGGGGACCCCGGTTGGAGAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTTCTTACGTCTGTTGCTAGATTATCGTCCAAAAGTGTTAATGCCCAAGTGACTGACATCAACTCCAAGGGATTGGAATTGAGGAAGACTGTTACTACAGTTGAGACTCAGAACTTGGAAGGCCTGCATCATGATGGCCAATTCTGCCATAAGCCCTGTCCTCCAGGTGAAAGGAAAGCTAGGGACTGCACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTCCAAATGCAGAAGATGTAGATTGTGTGATGAAGGACATGGCTTAGAAGTGGAAATAAACTGCACCCGGACCCAGAATACCAAGTGCAGATGTAAACCAAACTTTTTTTGTAACTCTACTGTATGTGAACACTGTGACCCTTGCACCAA</dnaseq>| | ||
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| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG006476]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 20:15, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT015487 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
810 nt |
| Genomic location |
chr10+:90750717..90768754 |
| Exon number |
4 |
| Exons |
90750717..90751113,90762786..90762951,90767457..90767594,90768646..90768754 |
| Genome context |
|
| Sequence |
000001 GGCAAAGTGG GGCGGGCGCG GGACGCGTGC GGGATTGCGG CGGCAGCGGC GCACGCGGGC ACCTGGGAGC GGCGGGCTGC 000080
000081 TGCGGGAGGC GTTGGAGACT GGCTCCCGGG GGCTGTTAGG ACCTTCCCTC AGGCCCGGGT GCTCAGAACG CTGGAGGACT 000160 000161 TGCTTTTCTT GGGCCTTGAT GCGAAGTGCT GACCCCGCTG GGCAGGCGGG GCAGCTCCGG CGCTCCTCGG AGACCACTGC 000240 000241 GCTCCACGTT GAGGTGGGCG TGGGGTGCGG ACAGGAATTG AAGCGGAAGT CTGGGAAGCT TTAGGGTCGC TGGAGGGGGA 000320 000321 CCCCGGTTGG AGAGAGGAGC GGAACTCCTG GACAAGCCCT GACAAGCCAA GCCAAAGGTC CGCTCCGGCG CGGGTGGGTT 000400 000401 CTTACGTCTG TTGCTAGATT ATCGTCCAAA AGTGTTAATG CCCAAGTGAC TGACATCAAC TCCAAGGGAT TGGAATTGAG 000480 000481 GAAGACTGTT ACTACAGTTG AGACTCAGAA CTTGGAAGGC CTGCATCATG ATGGCCAATT CTGCCATAAG CCCTGTCCTC 000560 000561 CAGGTGAAAG GAAAGCTAGG GACTGCACAG TCAATGGGGA TGAACCAGAC TGCGTGCCCT GCCAAGAAGG GAAGGAGTAC 000640 000641 ACAGACAAAG CCCATTTTTC TTCCAAATGC AGAAGATGTA GATTGTGTGA TGAAGGACAT GGCTTAGAAG TGGAAATAAA 000720 000721 CTGCACCCGG ACCCAGAATA CCAAGTGCAG ATGTAAACCA AACTTTTTTT GTAACTCTAC TGTATGTGAA CACTGTGACC 000800 000801 CTTGCACCAA |
Predicted Small Protein
| Name | NONHSAT015487_smProtein_527:706 |
| Length | 60 |
| Molecular weight | 6242.3193 |
| Aromaticity | 0.0169491525424 |
| Instability index | 48.5423728814 |
| Isoelectric point | 9.18438720703 |
| Runs | 9 |
| Runs residual | 0.0080858342404 |
| Runs probability | 0.0413158256297 |
| Amino acid sequence | MMANSAISPVLQVKGKLGTAQSMGMNQTACPAKKGRSTQTKPIFLPNAEDVDCVMKDMA |
| Secondary structure | LLLLLLLLLLLEELLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLHHHHHLL |
| PRMN | - |
| PiMo | - |
