Difference between revisions of "NONHSAT016991"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TTAATTATTTCACAAAAAGGCATAAAATAAAAGTTTTTTGAAAAAGTAGGATGCAATTGCCTATGAAATCAGTTTCCCAGTAAAATATTTAATTCTCTGAGAGCTGGCATATTTTGAGTCCGGATCAATCAGATTCTCAAAATAGCTTTCATGGGAAGCACTGTGACATCACTTGTCTCCATTTTATCTTCTTTCTCTCTAGTTCCCAGCCCATGGCACCCATTTCCATGATTTCAAATATTATCTGTGTGCTAGTGGCCCCGCATTTTATTTCCAGTCTGTGCTTTCCTTTTACTTGTGATCTCTACTTGGATATCTCAACATAAATTTTACACGTGCAAAATGGACCTTTGGAATCCCCTGCCGTTCCCCCAAACTCTGTAGTTCCAACCCCTTTTTTCCACCCATAAGAACAGAATCCAGCCGGTTTCTCGAGCTGAAAACCCAGGTGTCTTCCTTGATTGCGTCTTTGCGC</dnaseq>| | sequence = <dnaseq>TTAATTATTTCACAAAAAGGCATAAAATAAAAGTTTTTTGAAAAAGTAGGATGCAATTGCCTATGAAATCAGTTTCCCAGTAAAATATTTAATTCTCTGAGAGCTGGCATATTTTGAGTCCGGATCAATCAGATTCTCAAAATAGCTTTCATGGGAAGCACTGTGACATCACTTGTCTCCATTTTATCTTCTTTCTCTCTAGTTCCCAGCCCATGGCACCCATTTCCATGATTTCAAATATTATCTGTGTGCTAGTGGCCCCGCATTTTATTTCCAGTCTGTGCTTTCCTTTTACTTGTGATCTCTACTTGGATATCTCAACATAAATTTTACACGTGCAAAATGGACCTTTGGAATCCCCTGCCGTTCCCCCAAACTCTGTAGTTCCAACCCCTTTTTTCCACCCATAAGAACAGAATCCAGCCGGTTTCTCGAGCTGAAAACCCAGGTGTCTTCCTTGATTGCGTCTTTGCGC</dnaseq>| | ||
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| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:Transcripts]] |
Latest revision as of 20:21, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT016991 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
475 nt |
| Genomic location |
chr10+:130966505..130979976 |
| Exon number |
2 |
| Exons |
130966505..130966587,130979585..130979976 |
| Genome context |
|
| Sequence |
000001 TTAATTATTT CACAAAAAGG CATAAAATAA AAGTTTTTTG AAAAAGTAGG ATGCAATTGC CTATGAAATC AGTTTCCCAG 000080
000081 TAAAATATTT AATTCTCTGA GAGCTGGCAT ATTTTGAGTC CGGATCAATC AGATTCTCAA AATAGCTTTC ATGGGAAGCA 000160 000161 CTGTGACATC ACTTGTCTCC ATTTTATCTT CTTTCTCTCT AGTTCCCAGC CCATGGCACC CATTTCCATG ATTTCAAATA 000240 000241 TTATCTGTGT GCTAGTGGCC CCGCATTTTA TTTCCAGTCT GTGCTTTCCT TTTACTTGTG ATCTCTACTT GGATATCTCA 000320 000321 ACATAAATTT TACACGTGCA AAATGGACCT TTGGAATCCC CTGCCGTTCC CCCAAACTCT GTAGTTCCAA CCCCTTTTTT 000400 000401 CCACCCATAA GAACAGAATC CAGCCGGTTT CTCGAGCTGA AAACCCAGGT GTCTTCCTTG ATTGCGTCTT TGCGC |
Predicted Small Protein
| Name | NONHSAT016991_smProtein_212:325 |
| Length | 38 |
| Molecular weight | 4076.881 |
| Aromaticity | 0.108108108108 |
| Instability index | 51.3324324324 |
| Isoelectric point | 4.19598388672 |
| Runs | 5 |
| Runs residual | 0.0446317877511 |
| Runs probability | 0.0162338809398 |
| Amino acid sequence | MAPISMISNIICVLVAPHFISSLCFPFTCDLYLDIST |
| Secondary structure | LLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLEELLLL |
| PRMN | LLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL |
| PiMo | oooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiii |
