Difference between revisions of "NONHSAT021661"
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==Annotated Information==
===Transcriptomic Nomeclature===
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sequence = <dnaseq>ATCTCACATCTCCTTCAGAACTTACGCTGGAAAAACTCCAACAGCTTCATATGGACAGATGGACTTCAAATGCTGTTTGTATTCCAGAGACTAGGGAGAGTTGGCCCTATGCATGGGCAAACAGCTGGACTTTCCAAGGAAGGTTCAGACTAGCTGTGTTCAGCATTCAAGAAGGAAGATCCTCCCTCTTGCACAATTAGAGTGTCCCCATCGGTCTCCAGTGCGGCATCCCTTCCTTGCCTTCTACCTCTGTTCCACCCCCTTTCCTTCCTTTCCTCTCTGTACCATTCATTCTCCCTGACCGGCCTTTCTTGCCGAGGGTTCTGTGGCTCTTACCCTTGTGAAGCTTTTCCTTTAGCCTGGGACAGAAGGACCTCCCAGCCCCCAAAGGATCTCCCAGTGACCAAAGGATGCGAAGAGTGATAGTTACGTGCTCCTGACTGATCACACCGCAGACATTTAGATTTTTATACCCAAGGCACTTTAAAAAAATGTTTTATAAATAGAGAATAAATTGAATTCTTGTTCCATAAA</dnaseq>| | sequence = <dnaseq>ATCTCACATCTCCTTCAGAACTTACGCTGGAAAAACTCCAACAGCTTCATATGGACAGATGGACTTCAAATGCTGTTTGTATTCCAGAGACTAGGGAGAGTTGGCCCTATGCATGGGCAAACAGCTGGACTTTCCAAGGAAGGTTCAGACTAGCTGTGTTCAGCATTCAAGAAGGAAGATCCTCCCTCTTGCACAATTAGAGTGTCCCCATCGGTCTCCAGTGCGGCATCCCTTCCTTGCCTTCTACCTCTGTTCCACCCCCTTTCCTTCCTTTCCTCTCTGTACCATTCATTCTCCCTGACCGGCCTTTCTTGCCGAGGGTTCTGTGGCTCTTACCCTTGTGAAGCTTTTCCTTTAGCCTGGGACAGAAGGACCTCCCAGCCCCCAAAGGATCTCCCAGTGACCAAAGGATGCGAAGAGTGATAGTTACGTGCTCCTGACTGATCACACCGCAGACATTTAGATTTTTATACCCAAGGCACTTTAAAAAAATGTTTTATAAATAGAGAATAAATTGAATTCTTGTTCCATAAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG008468]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 20:34, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT021661 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
534 nt |
| Genomic location |
chr11+:61135377..61136683 |
| Exon number |
2 |
| Exons |
61135377..61135470,61136244..61136683 |
| Genome context |
|
| Sequence |
000001 ATCTCACATC TCCTTCAGAA CTTACGCTGG AAAAACTCCA ACAGCTTCAT ATGGACAGAT GGACTTCAAA TGCTGTTTGT 000080
000081 ATTCCAGAGA CTAGGGAGAG TTGGCCCTAT GCATGGGCAA ACAGCTGGAC TTTCCAAGGA AGGTTCAGAC TAGCTGTGTT 000160 000161 CAGCATTCAA GAAGGAAGAT CCTCCCTCTT GCACAATTAG AGTGTCCCCA TCGGTCTCCA GTGCGGCATC CCTTCCTTGC 000240 000241 CTTCTACCTC TGTTCCACCC CCTTTCCTTC CTTTCCTCTC TGTACCATTC ATTCTCCCTG ACCGGCCTTT CTTGCCGAGG 000320 000321 GTTCTGTGGC TCTTACCCTT GTGAAGCTTT TCCTTTAGCC TGGGACAGAA GGACCTCCCA GCCCCCAAAG GATCTCCCAG 000400 000401 TGACCAAAGG ATGCGAAGAG TGATAGTTAC GTGCTCCTGA CTGATCACAC CGCAGACATT TAGATTTTTA TACCCAAGGC 000480 000481 ACTTTAAAAA AATGTTTTAT AAATAGAGAA TAAATTGAAT TCTTGTTCCA TAAA |
Predicted Small Protein
| Name | NONHSAT021661_smProtein_50:199 |
| Length | 50 |
| Molecular weight | 5803.4219 |
| Aromaticity | 0.163265306122 |
| Instability index | 46.6469387755 |
| Isoelectric point | 8.00006103516 |
| Runs | 9 |
| Runs residual | 0.0216216216216 |
| Runs probability | 0.032709179768 |
| Amino acid sequence | MDRWTSNAVCIPETRESWPYAWANSWTFQGRFRLAVFSIQEGRSSLLHN |
| Secondary structure | LLLLLLLLEELLLLLLLLLHHHHLLLEEEEEEEEEEEEEELLLEELLLL |
| PRMN | - |
| PiMo | - |
