Difference between revisions of "NONHSAT025154"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GTCAGATGCAGCCGTGCCAGCCCAAGACCCCAGCAACAGCGATCCAGGAACAGAGACAGAGTTAGCTGACACAGCCCTGGATCTGCTCCTCTTGCTACTAACAGAACAGTGGAAATGGCTATGTACCGAAAACATGCAAAAGTTTCTTCGTCTTATCTTTGGGACCCTAGTTCAAAGATCTCGTAGTAGAAATTCTTGGGGTGAACAAATGCCGGCTGAGCTGGGGTCTAGTCCTGGAGTCACTACAACAACCCCTCATCAACAGGCATTTGATTTACTGCCTTGGGGACATCATCCTGGAATTCTTGGATCTCAGTGCCTCTGTTGAGGAGTCTGCTGCTACCACCTCTGCCTCAGATACCCCAGGCAACTCTAAGAGGATGGGTGTCTCCTCTTAGCTGGTTATTCACGCCTTCTTCCCAGGTCAGGGAAGTAGAGTTACTCGGCCACCAGAGACCAGTCAGGAAGCCCGTGCCCTCTTCAAGTAGGCTACAGCTAAGAAGGCCTAGGTTCTCGGTGGCTCACTTCTCTCCCACTTCTGCTCCATTTGTAGCAGGTGACAGGGGTCTGTGTGTCCCAGTTGTATGCACGTTTATTTCCCTGTTCCTTTTGTGATGTTGGGATTGTTGCTGGTGAGTAGATCCTGTTTCCTTTGGGAAAAGAAGCTGTGAGGTAGAGGAATGAACCCCTTTTGCTTCTCCTTTTGCCATCCTCCCTGAGATTGTTTGCCAGAATCCTGGCCCTGTGCACACATGTGCTTAATCCACCAGCACACAAGCTCTAGATAGAACAGGAAAAAAACTGTGGCCAGATTTCCTTGGAGGAGAAAACAACCTTCTCAGCTCTCTGTTCCTACCCGGAAACTAAAAATTCATTCAGGGCCATTCTCAAAAACCAGACTCCTGGG</dnaseq>| | sequence = <dnaseq>GTCAGATGCAGCCGTGCCAGCCCAAGACCCCAGCAACAGCGATCCAGGAACAGAGACAGAGTTAGCTGACACAGCCCTGGATCTGCTCCTCTTGCTACTAACAGAACAGTGGAAATGGCTATGTACCGAAAACATGCAAAAGTTTCTTCGTCTTATCTTTGGGACCCTAGTTCAAAGATCTCGTAGTAGAAATTCTTGGGGTGAACAAATGCCGGCTGAGCTGGGGTCTAGTCCTGGAGTCACTACAACAACCCCTCATCAACAGGCATTTGATTTACTGCCTTGGGGACATCATCCTGGAATTCTTGGATCTCAGTGCCTCTGTTGAGGAGTCTGCTGCTACCACCTCTGCCTCAGATACCCCAGGCAACTCTAAGAGGATGGGTGTCTCCTCTTAGCTGGTTATTCACGCCTTCTTCCCAGGTCAGGGAAGTAGAGTTACTCGGCCACCAGAGACCAGTCAGGAAGCCCGTGCCCTCTTCAAGTAGGCTACAGCTAAGAAGGCCTAGGTTCTCGGTGGCTCACTTCTCTCCCACTTCTGCTCCATTTGTAGCAGGTGACAGGGGTCTGTGTGTCCCAGTTGTATGCACGTTTATTTCCCTGTTCCTTTTGTGATGTTGGGATTGTTGCTGGTGAGTAGATCCTGTTTCCTTTGGGAAAAGAAGCTGTGAGGTAGAGGAATGAACCCCTTTTGCTTCTCCTTTTGCCATCCTCCCTGAGATTGTTTGCCAGAATCCTGGCCCTGTGCACACATGTGCTTAATCCACCAGCACACAAGCTCTAGATAGAACAGGAAAAAAACTGTGGCCAGATTTCCTTGGAGGAGAAAACAACCTTCTCAGCTCTCTGTTCCTACCCGGAAACTAAAAATTCATTCAGGGCCATTCTCAAAAACCAGACTCCTGGG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG010062]][[Category:Transcripts]] |
Latest revision as of 20:49, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT025154 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
907 nt |
| Genomic location |
chr11-:130747808..130775894 |
| Exon number |
4 |
| Exons |
130747808..130748449,130749519..130749606,130773150..130773279,130775848..130775894 |
| Genome context |
|
| Sequence |
000001 GTCAGATGCA GCCGTGCCAG CCCAAGACCC CAGCAACAGC GATCCAGGAA CAGAGACAGA GTTAGCTGAC ACAGCCCTGG 000080
000081 ATCTGCTCCT CTTGCTACTA ACAGAACAGT GGAAATGGCT ATGTACCGAA AACATGCAAA AGTTTCTTCG TCTTATCTTT 000160 000161 GGGACCCTAG TTCAAAGATC TCGTAGTAGA AATTCTTGGG GTGAACAAAT GCCGGCTGAG CTGGGGTCTA GTCCTGGAGT 000240 000241 CACTACAACA ACCCCTCATC AACAGGCATT TGATTTACTG CCTTGGGGAC ATCATCCTGG AATTCTTGGA TCTCAGTGCC 000320 000321 TCTGTTGAGG AGTCTGCTGC TACCACCTCT GCCTCAGATA CCCCAGGCAA CTCTAAGAGG ATGGGTGTCT CCTCTTAGCT 000400 000401 GGTTATTCAC GCCTTCTTCC CAGGTCAGGG AAGTAGAGTT ACTCGGCCAC CAGAGACCAG TCAGGAAGCC CGTGCCCTCT 000480 000481 TCAAGTAGGC TACAGCTAAG AAGGCCTAGG TTCTCGGTGG CTCACTTCTC TCCCACTTCT GCTCCATTTG TAGCAGGTGA 000560 000561 CAGGGGTCTG TGTGTCCCAG TTGTATGCAC GTTTATTTCC CTGTTCCTTT TGTGATGTTG GGATTGTTGC TGGTGAGTAG 000640 000641 ATCCTGTTTC CTTTGGGAAA AGAAGCTGTG AGGTAGAGGA ATGAACCCCT TTTGCTTCTC CTTTTGCCAT CCTCCCTGAG 000720 000721 ATTGTTTGCC AGAATCCTGG CCCTGTGCAC ACATGTGCTT AATCCACCAG CACACAAGCT CTAGATAGAA CAGGAAAAAA 000800 000801 ACTGTGGCCA GATTTCCTTG GAGGAGAAAA CAACCTTCTC AGCTCTCTGT TCCTACCCGG AAACTAAAAA TTCATTCAGG 000880 000881 GCCATTCTCA AAAACCAGAC TCCTGGG |
Predicted Small Protein
| Name | NONHSAT025154_smProtein_584:670 |
| Length | 29 |
| Molecular weight | 3354.1442 |
| Aromaticity | 0.178571428571 |
| Instability index | 94.5607142857 |
| Isoelectric point | 9.18670654297 |
| Runs | 6 |
| Runs residual | 0.0110663983903 |
| Runs probability | 0.00485779897543 |
| Amino acid sequence | MHVYFPVPFVMLGLLLVSRSCFLWEKKL |
| Secondary structure | LEEEELLHHHHHHHHHHHHHHHHHEELL |
| PRMN | LLLHHHHHHHHHHHHHHHHHHLLLLLLL |
| PiMo | i??????????????????????????? |
